RNA–Protein interactions for RNA: ENST00000589990.1

PRKCSH-210, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-210ENST00000589990 ZBTB12Q9Y330 459 aaPredicted RBP17.01■□□□□ 0.31
PRKCSH-210ENST00000589990 HTATSF1O43719 755 aaKnown RBP17■□□□□ 0.31
PRKCSH-210ENST00000589990 KIAA2012Q0VF49 1180 aa17■□□□□ 0.31
PRKCSH-210ENST00000589990 NOGQ13253 232 aa17■□□□□ 0.31
PRKCSH-210ENST00000589990 DPP8Q6V1X1 898 aaPredicted RBP17■□□□□ 0.31
PRKCSH-210ENST00000589990 GIGYF2Q6Y7W6 1299 aaKnown RBP17■□□□□ 0.31
PRKCSH-210ENST00000589990 CDC37L1Q7L3B6 337 aa17■□□□□ 0.31
PRKCSH-210ENST00000589990 SAMD7Q7Z3H4 446 aa17■□□□□ 0.31
PRKCSH-210ENST00000589990 ZNF428Q96B54 188 aa17■□□□□ 0.31
PRKCSH-210ENST00000589990 CNOT7Q9UIV1 285 aaKnown RBP17■□□□□ 0.31
PRKCSH-210ENST00000589990 POLR2AP24928 1970 aaKnown RBP17■□□□□ 0.31
PRKCSH-210ENST00000589990 ANXA1P04083 346 aa16.99■□□□□ 0.31
PRKCSH-210ENST00000589990 PPP2R1AP30153 589 aa16.99■□□□□ 0.31
PRKCSH-210ENST00000589990 LRP10Q7Z4F1 713 aa16.99■□□□□ 0.31
PRKCSH-210ENST00000589990 MICALL2Q8IY33 904 aa16.99■□□□□ 0.31
PRKCSH-210ENST00000589990 ZC3H15Q8WU90 426 aaKnown RBP16.99■□□□□ 0.31
PRKCSH-210ENST00000589990 NLRP3Q96P20 1036 aa16.99■□□□□ 0.31
PRKCSH-210ENST00000589990 NUDCQ9Y266 331 aa16.99■□□□□ 0.31
PRKCSH-210ENST00000589990 COL4A1P02462 1669 aa16.98■□□□□ 0.31
PRKCSH-210ENST00000589990 HCLS1P14317 486 aaPredicted RBP16.98■□□□□ 0.31
PRKCSH-210ENST00000589990 PROSER3Q2NL68 480 aa16.98■□□□□ 0.31
PRKCSH-210ENST00000589990 SLC10A5Q5PT55 438 aa16.98■□□□□ 0.31
PRKCSH-210ENST00000589990 MPNDQ8N594 471 aa16.98■□□□□ 0.31
PRKCSH-210ENST00000589990 VPS33BQ9H267 617 aa16.98■□□□□ 0.31
PRKCSH-210ENST00000589990 CDHR2Q9BYE9 1310 aa16.97■□□□□ 0.31
PRKCSH-210ENST00000589990 ADM5C9JUS6 153 aa16.97■□□□□ 0.31
PRKCSH-210ENST00000589990 KIF23Q02241 960 aaPredicted RBP16.97■□□□□ 0.31
PRKCSH-210ENST00000589990 PPP1R42Q7Z4L9 355 aa16.97■□□□□ 0.31
PRKCSH-210ENST00000589990 SP8Q8IXZ3 490 aa16.97■□□□□ 0.31
PRKCSH-210ENST00000589990 SUPT20HQ8NEM7 779 aa16.97■□□□□ 0.31
PRKCSH-210ENST00000589990 ANKRD36CQ5JPF3 1778 aa16.97■□□□□ 0.31
PRKCSH-210ENST00000589990 TRPA1O75762 1119 aa16.96■□□□□ 0.31
PRKCSH-210ENST00000589990 PDIA6Q15084 440 aa16.96■□□□□ 0.31
PRKCSH-210ENST00000589990 TBC1D10BQ4KMP7 808 aaPredicted RBP16.96■□□□□ 0.31
PRKCSH-210ENST00000589990 RGMBQ6NW40 437 aa16.96■□□□□ 0.31
PRKCSH-210ENST00000589990 UTP14AQ9BVJ6 771 aaKnown RBP16.96■□□□□ 0.31
PRKCSH-210ENST00000589990 KCNQ5Q9NR82 932 aa16.96■□□□□ 0.31
PRKCSH-210ENST00000589990 RNF186Q9NXI6 227 aa16.96■□□□□ 0.31
PRKCSH-210ENST00000589990 TNIP1Q15025 636 aa16.95■□□□□ 0.3
PRKCSH-210ENST00000589990 TMX4Q9H1E5 349 aaPredicted RBP16.95■□□□□ 0.3
PRKCSH-210ENST00000589990 LRRC37AA6NMS7 1700 aa16.94■□□□□ 0.3
PRKCSH-210ENST00000589990 H7C1D1 291 aa16.94■□□□□ 0.3
PRKCSH-210ENST00000589990 PSMD14O00487 310 aa16.94■□□□□ 0.3
PRKCSH-210ENST00000589990 BBOX1O75936 387 aa16.94■□□□□ 0.3
PRKCSH-210ENST00000589990 PARP10Q53GL7 1025 aa16.94■□□□□ 0.3
PRKCSH-210ENST00000589990 KRT26Q7Z3Y9 468 aa16.94■□□□□ 0.3
PRKCSH-210ENST00000589990 CCER1Q8TC90 406 aaPredicted RBP16.94■□□□□ 0.3
PRKCSH-210ENST00000589990 DBNDD1Q9H9R9 158 aa16.94■□□□□ 0.3
PRKCSH-210ENST00000589990 GBA2Q9HCG7 927 aaPredicted RBP16.94■□□□□ 0.3
PRKCSH-210ENST00000589990 ASTN2O75129 1339 aaPredicted RBP16.94■□□□□ 0.3
PRKCSH-210ENST00000589990 RBM26Q5T8P6 1007 aaKnown RBP16.93■□□□□ 0.3
PRKCSH-210ENST00000589990 RTL9Q8NET4 1388 aa16.92■□□□□ 0.3
PRKCSH-210ENST00000589990 AKAP11Q9UKA4 1901 aa16.92■□□□□ 0.3
PRKCSH-210ENST00000589990 EIF2S2P20042 333 aaKnown RBP16.92■□□□□ 0.3
PRKCSH-210ENST00000589990 ZNF157P51786 506 aaPredicted RBP16.92■□□□□ 0.3
PRKCSH-210ENST00000589990 GRAPQ13588 217 aa16.92■□□□□ 0.3
PRKCSH-210ENST00000589990 NLRP10Q86W26 655 aa16.92■□□□□ 0.3
PRKCSH-210ENST00000589990 GRAPLQ8TC17 118 aaPredicted RBP16.92■□□□□ 0.3
PRKCSH-210ENST00000589990 PNISRQ8TF01 805 aaKnown RBP16.92■□□□□ 0.3
PRKCSH-210ENST00000589990 CSRNP1Q96S65 589 aa16.92■□□□□ 0.3
PRKCSH-210ENST00000589990 SAGE1Q9NXZ1 904 aa16.92■□□□□ 0.3
PRKCSH-210ENST00000589990 DDX60Q8IY21 1712 aaKnown RBP16.91■□□□□ 0.3
PRKCSH-210ENST00000589990 RIMBP2O15034 1052 aa16.91■□□□□ 0.3
PRKCSH-210ENST00000589990 NECTIN2Q92692 538 aa16.91■□□□□ 0.3
PRKCSH-210ENST00000589990 PLEKHF1Q96S99 279 aa16.91■□□□□ 0.3
PRKCSH-210ENST00000589990 SCN9AQ15858 1988 aa16.91■□□□□ 0.3
PRKCSH-210ENST00000589990 DDX46Q7L014 1031 aaKnown RBP16.9■□□□□ 0.3
PRKCSH-210ENST00000589990 C2orf69Q8N8R5 385 aa16.9■□□□□ 0.3
PRKCSH-210ENST00000589990 DPF2Q92785 391 aa16.9■□□□□ 0.3
PRKCSH-210ENST00000589990 ERBB4Q15303 1308 aa16.9■□□□□ 0.3
PRKCSH-210ENST00000589990 SLC10A3P09131 477 aa16.89■□□□□ 0.29
PRKCSH-210ENST00000589990 AIMP1Q12904 312 aaKnown RBP16.89■□□□□ 0.29
PRKCSH-210ENST00000589990 DOK7Q18PE1 504 aa16.89■□□□□ 0.29
PRKCSH-210ENST00000589990 PRPF38BQ5VTL8 546 aaKnown RBP16.89■□□□□ 0.29
PRKCSH-210ENST00000589990 CELF1Q92879 486 aaKnown RBP16.89■□□□□ 0.29
PRKCSH-210ENST00000589990 CCDC102AQ96A19 550 aa16.89■□□□□ 0.29
PRKCSH-210ENST00000589990 POLLQ9UGP5 575 aa16.89■□□□□ 0.29
PRKCSH-210ENST00000589990 TRMT112Q9UI30 125 aaKnown RBP16.89■□□□□ 0.29
PRKCSH-210ENST00000589990 NFE2L2Q16236 605 aa16.88■□□□□ 0.29
PRKCSH-210ENST00000589990 WASHC4Q2M389 1173 aa16.88■□□□□ 0.29
PRKCSH-210ENST00000589990 COPS6Q7L5N1 327 aa16.88■□□□□ 0.29
PRKCSH-210ENST00000589990 CTU1Q7Z7A3 348 aaKnown RBP16.88■□□□□ 0.29
PRKCSH-210ENST00000589990 XAGE3Q8WTP9 111 aa16.88■□□□□ 0.29
PRKCSH-210ENST00000589990 NSFL1CQ9UNZ2 370 aaKnown RBP16.88■□□□□ 0.29
PRKCSH-210ENST00000589990 ECE2O60344 883 aa16.87■□□□□ 0.29
PRKCSH-210ENST00000589990 GPSM2P81274 684 aa16.87■□□□□ 0.29
PRKCSH-210ENST00000589990 DCPSQ96C86 337 aaKnown RBP16.87■□□□□ 0.29
PRKCSH-210ENST00000589990 GGA3Q9NZ52 723 aa16.87■□□□□ 0.29
PRKCSH-210ENST00000589990 TSPYL4Q9UJ04 414 aa16.87■□□□□ 0.29
PRKCSH-210ENST00000589990 SCAF8Q9UPN6 1271 aaKnown RBP16.87■□□□□ 0.29
PRKCSH-210ENST00000589990 HPS5Q9UPZ3 1129 aa16.87■□□□□ 0.29
PRKCSH-210ENST00000589990 KIF4BQ2VIQ3 1234 aa16.86■□□□□ 0.29
PRKCSH-210ENST00000589990 MOB2Q70IA6 237 aa16.86■□□□□ 0.29
PRKCSH-210ENST00000589990 RASAL3Q86YV0 1011 aa16.86■□□□□ 0.29
PRKCSH-210ENST00000589990 CDCA5Q96FF9 252 aa16.86■□□□□ 0.29
PRKCSH-210ENST00000589990 SH3TC1Q8TE82 1336 aa16.86■□□□□ 0.29
PRKCSH-210ENST00000589990 C6orf229H3BNL8 230 aa16.85■□□□□ 0.29
PRKCSH-210ENST00000589990 TCIRG1Q13488 830 aa16.85■□□□□ 0.29
PRKCSH-210ENST00000589990 KRT24Q2M2I5 525 aa16.85■□□□□ 0.29
PRKCSH-210ENST00000589990 RPS12P25398 132 aaKnown RBP16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms