RNA–Protein interactions for RNA: ENST00000589897.1

TPM4-211, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-211ENST00000589897 ELL2O00472 640 aaPredicted RBP10.74□□□□□ -0.69
TPM4-211ENST00000589897 TCERG1O14776 1098 aaKnown RBP10.74□□□□□ -0.69
TPM4-211ENST00000589897 NTSR2O95665 410 aa10.74□□□□□ -0.69
TPM4-211ENST00000589897 SOX10P56693 466 aa10.74□□□□□ -0.69
TPM4-211ENST00000589897 GRIPAP1Q4V328 841 aa10.74□□□□□ -0.69
TPM4-211ENST00000589897 SYNE4Q8N205 404 aa10.74□□□□□ -0.69
TPM4-211ENST00000589897 TRMT112Q9UI30 125 aaKnown RBP10.74□□□□□ -0.69
TPM4-211ENST00000589897 ABCC12Q96J65 1359 aa10.74□□□□□ -0.69
TPM4-211ENST00000589897 CELF2O95319 508 aaKnown RBP10.73□□□□□ -0.69
TPM4-211ENST00000589897 TCIRG1Q13488 830 aa10.73□□□□□ -0.69
TPM4-211ENST00000589897 CRY2Q49AN0 593 aa10.73□□□□□ -0.69
TPM4-211ENST00000589897 CC2D2BQ6DHV5 1058 aa10.73□□□□□ -0.69
TPM4-211ENST00000589897 CIAPIN1Q6FI81 312 aa10.73□□□□□ -0.69
TPM4-211ENST00000589897 ANKRD13DQ6ZTN6 518 aa10.73□□□□□ -0.69
TPM4-211ENST00000589897 LRP10Q7Z4F1 713 aa10.73□□□□□ -0.69
TPM4-211ENST00000589897 PLBD2Q8NHP8 589 aa10.73□□□□□ -0.69
TPM4-211ENST00000589897 GJA3Q9Y6H8 435 aa10.73□□□□□ -0.69
TPM4-211ENST00000589897 ANKRD36CQ5JPF3 1778 aa10.72□□□□□ -0.69
TPM4-211ENST00000589897 TRAF5O00463 557 aa10.72□□□□□ -0.69
TPM4-211ENST00000589897 PPEF1O14829 653 aaPredicted RBP10.72□□□□□ -0.69
TPM4-211ENST00000589897 EPS15P42566 896 aa10.72□□□□□ -0.69
TPM4-211ENST00000589897 GOLGA2Q08379 1002 aa10.72□□□□□ -0.69
TPM4-211ENST00000589897 OLFM4Q6UX06 510 aa10.72□□□□□ -0.69
TPM4-211ENST00000589897 RIC3Q7Z5B4 369 aa10.72□□□□□ -0.69
TPM4-211ENST00000589897 NLRP10Q86W26 655 aa10.72□□□□□ -0.69
TPM4-211ENST00000589897 CRAMP1Q96RY5 1269 aa10.72□□□□□ -0.69
TPM4-211ENST00000589897 PSMD1Q99460 953 aa10.72□□□□□ -0.69
TPM4-211ENST00000589897 SAGE1Q9NXZ1 904 aa10.72□□□□□ -0.69
TPM4-211ENST00000589897 SCN4AP35499 1836 aa10.72□□□□□ -0.69
TPM4-211ENST00000589897 ZNF853P0CG23 659 aa10.71□□□□□ -0.69
TPM4-211ENST00000589897 HCLS1P14317 486 aaPredicted RBP10.71□□□□□ -0.69
TPM4-211ENST00000589897 HOXA10P31260 410 aaPredicted RBP10.71□□□□□ -0.69
TPM4-211ENST00000589897 FMR1Q06787 632 aaKnown RBP eCLIP10.71□□□□□ -0.69
TPM4-211ENST00000589897 RIC1Q4ADV7 1423 aa10.71□□□□□ -0.69
TPM4-211ENST00000589897 CCDC184Q52MB2 194 aa10.71□□□□□ -0.69
TPM4-211ENST00000589897 CCDC30Q5VVM6 783 aa10.71□□□□□ -0.69
TPM4-211ENST00000589897 DDX46Q7L014 1031 aaKnown RBP10.71□□□□□ -0.69
TPM4-211ENST00000589897 SH3TC1Q8TE82 1336 aa10.71□□□□□ -0.69
TPM4-211ENST00000589897 ATP5J2-PTCD1G3V325 749 aa10.7□□□□□ -0.7
TPM4-211ENST00000589897 DDX58O95786 925 aaKnown RBP10.7□□□□□ -0.7
TPM4-211ENST00000589897 PKN2Q16513 984 aaKnown RBP10.7□□□□□ -0.7
TPM4-211ENST00000589897 SLC10A5Q5PT55 438 aa10.7□□□□□ -0.7
TPM4-211ENST00000589897 ZNF428Q96B54 188 aa10.7□□□□□ -0.7
TPM4-211ENST00000589897 ADARB2Q9NS39 739 aaKnown RBP10.7□□□□□ -0.7
TPM4-211ENST00000589897 BBOX1O75936 387 aa10.69□□□□□ -0.7
TPM4-211ENST00000589897 HSP90B1P14625 803 aaKnown RBP10.69□□□□□ -0.7
TPM4-211ENST00000589897 SCNN1DP51172 638 aa10.69□□□□□ -0.7
TPM4-211ENST00000589897 C3orf67Q6ZVT6 689 aa10.69□□□□□ -0.7
TPM4-211ENST00000589897 CDC37L1Q7L3B6 337 aa10.69□□□□□ -0.7
TPM4-211ENST00000589897 LARGE2Q8N3Y3 721 aa10.69□□□□□ -0.7
TPM4-211ENST00000589897 C8orf58Q8NAV2 365 aa10.69□□□□□ -0.7
TPM4-211ENST00000589897 ZC3H15Q8WU90 426 aaKnown RBP10.69□□□□□ -0.7
TPM4-211ENST00000589897 CCDC102AQ96A19 550 aa10.69□□□□□ -0.7
TPM4-211ENST00000589897 STK31Q9BXU1 1019 aa10.69□□□□□ -0.7
TPM4-211ENST00000589897 SALL2Q9Y467 1007 aaPredicted RBP10.69□□□□□ -0.7
TPM4-211ENST00000589897 CCDC27Q2M243 656 aa10.68□□□□□ -0.7
TPM4-211ENST00000589897 RTL5Q5HYW3 569 aaPredicted RBP10.68□□□□□ -0.7
TPM4-211ENST00000589897 HABP4Q5JVS0 413 aaKnown RBP10.68□□□□□ -0.7
TPM4-211ENST00000589897 CTU1Q7Z7A3 348 aaKnown RBP10.68□□□□□ -0.7
TPM4-211ENST00000589897 WWC1Q8IX03 1113 aa10.68□□□□□ -0.7
TPM4-211ENST00000589897 SUPT20HQ8NEM7 779 aa10.68□□□□□ -0.7
TPM4-211ENST00000589897 TSR2Q969E8 191 aaKnown RBP10.68□□□□□ -0.7
TPM4-211ENST00000589897 FAM89AQ96GI7 184 aa10.68□□□□□ -0.7
TPM4-211ENST00000589897 VPS33BQ9H267 617 aa10.68□□□□□ -0.7
TPM4-211ENST00000589897 PHAXQ9H814 394 aaKnown RBP10.68□□□□□ -0.7
TPM4-211ENST00000589897 PGAP2Q9UHJ9 254 aa10.68□□□□□ -0.7
TPM4-211ENST00000589897 ABCC4O15439 1325 aa10.67□□□□□ -0.7
TPM4-211ENST00000589897 PPIP5K2O43314 1243 aa10.67□□□□□ -0.7
TPM4-211ENST00000589897 DPP8Q6V1X1 898 aaPredicted RBP10.67□□□□□ -0.7
TPM4-211ENST00000589897 NIM1KQ8IY84 436 aa10.67□□□□□ -0.7
TPM4-211ENST00000589897 REM2Q8IYK8 340 aaPredicted RBP10.67□□□□□ -0.7
TPM4-211ENST00000589897 FAM9BQ8IZU0 186 aa10.67□□□□□ -0.7
TPM4-211ENST00000589897 MPNDQ8N594 471 aa10.67□□□□□ -0.7
TPM4-211ENST00000589897 MYD88Q99836 296 aa10.67□□□□□ -0.7
TPM4-211ENST00000589897 ISCA1Q9BUE6 129 aa10.67□□□□□ -0.7
TPM4-211ENST00000589897 GPRC5DQ9NZD1 345 aa10.67□□□□□ -0.7
TPM4-211ENST00000589897 ATP6V0A2Q9Y487 856 aa10.67□□□□□ -0.7
TPM4-211ENST00000589897 PDE4DIPQ5VU43 2346 aa10.66□□□□□ -0.7
TPM4-211ENST00000589897 IRS4O14654 1257 aaPredicted RBP10.66□□□□□ -0.7
TPM4-211ENST00000589897 HUNKP57058 714 aa10.66□□□□□ -0.7
TPM4-211ENST00000589897 NEXNQ0ZGT2 675 aa10.66□□□□□ -0.7
TPM4-211ENST00000589897 GRAPQ13588 217 aa10.66□□□□□ -0.7
TPM4-211ENST00000589897 TWISTNBQ3B726 338 aaPredicted RBP10.66□□□□□ -0.7
TPM4-211ENST00000589897 TMC4Q7Z404 712 aa10.66□□□□□ -0.7
TPM4-211ENST00000589897 SP8Q8IXZ3 490 aa10.66□□□□□ -0.7
TPM4-211ENST00000589897 GRAPLQ8TC17 118 aaPredicted RBP10.66□□□□□ -0.7
TPM4-211ENST00000589897 ZNF408Q9H9D4 720 aa10.66□□□□□ -0.7
TPM4-211ENST00000589897 LAMB2P55268 1798 aa10.66□□□□□ -0.7
TPM4-211ENST00000589897 IL16Q14005 1332 aa10.65□□□□□ -0.7
TPM4-211ENST00000589897 TRPA1O75762 1119 aa10.65□□□□□ -0.7
TPM4-211ENST00000589897 TRIM28Q13263 835 aaKnown RBP10.65□□□□□ -0.7
TPM4-211ENST00000589897 TSPYL6Q8N831 410 aa10.65□□□□□ -0.7
TPM4-211ENST00000589897 GLIS2Q9BZE0 524 aaPredicted RBP10.65□□□□□ -0.7
TPM4-211ENST00000589897 CWC25Q9NXE8 425 aaPredicted RBP10.65□□□□□ -0.7
TPM4-211ENST00000589897 RNF186Q9NXI6 227 aa10.65□□□□□ -0.7
TPM4-211ENST00000589897 SLC4A2P04920 1241 aa10.64□□□□□ -0.71
TPM4-211ENST00000589897 AOC3Q16853 763 aa10.64□□□□□ -0.71
TPM4-211ENST00000589897 NCBP3Q53F19 620 aaKnown RBP10.64□□□□□ -0.71
TPM4-211ENST00000589897 RGMBQ6NW40 437 aa10.64□□□□□ -0.71
TPM4-211ENST00000589897 WDR63Q8IWG1 891 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms