RNA–Protein interactions for RNA: ENST00000589882.1

TREM1-206, Transcript of triggering receptor expressed on myeloid cells 1, humanhuman

Gene TREM1, Length 1,876 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREM1-206ENST00000589882 HOMEZQ8IX15 550 aa13.71□□□□□ -0.21
TREM1-206ENST00000589882 GOLGA1Q92805 767 aa13.71□□□□□ -0.21
TREM1-206ENST00000589882 DDX11Q96FC9 970 aa13.71□□□□□ -0.21
TREM1-206ENST00000589882 SPATA32Q96LK8 384 aa13.71□□□□□ -0.21
TREM1-206ENST00000589882 SLC12A5Q9H2X9 1139 aa13.71□□□□□ -0.21
TREM1-206ENST00000589882 CDC42BPGQ6DT37 1551 aa13.71□□□□□ -0.22
TREM1-206ENST00000589882 C21orf2O43822 256 aa13.7□□□□□ -0.22
TREM1-206ENST00000589882 ERLIN1O75477 346 aa13.7□□□□□ -0.22
TREM1-206ENST00000589882 ERLIN2O94905 339 aa13.7□□□□□ -0.22
TREM1-206ENST00000589882 ANO10Q9NW15 660 aa13.7□□□□□ -0.22
TREM1-206ENST00000589882 PPP6R1Q9UPN7 881 aa13.7□□□□□ -0.22
TREM1-206ENST00000589882 CHMP3Q9Y3E7 222 aa13.7□□□□□ -0.22
TREM1-206ENST00000589882 TUBGCP6Q96RT7 1819 aa13.7□□□□□ -0.22
TREM1-206ENST00000589882 KIAA0232Q92628 1395 aa13.7□□□□□ -0.22
TREM1-206ENST00000589882 GOLGA6L9A6NEM1 432 aa13.7□□□□□ -0.22
TREM1-206ENST00000589882 FCHSD2O94868 740 aa13.7□□□□□ -0.22
TREM1-206ENST00000589882 GNL2Q13823 731 aaKnown RBP13.7□□□□□ -0.22
TREM1-206ENST00000589882 TWISTNBQ3B726 338 aaPredicted RBP13.7□□□□□ -0.22
TREM1-206ENST00000589882 HSP90B2PQ58FF3 399 aa13.7□□□□□ -0.22
TREM1-206ENST00000589882 CCDC30Q5VVM6 783 aa13.7□□□□□ -0.22
TREM1-206ENST00000589882 RSRC2Q7L4I2 434 aaKnown RBP13.7□□□□□ -0.22
TREM1-206ENST00000589882 CEP57L1Q8IYX8 460 aa13.7□□□□□ -0.22
TREM1-206ENST00000589882 MICALL1Q8N3F8 863 aa13.7□□□□□ -0.22
TREM1-206ENST00000589882 GIMAP7Q8NHV1 300 aa13.7□□□□□ -0.22
TREM1-206ENST00000589882 FAM71BQ8TC56 605 aa13.7□□□□□ -0.22
TREM1-206ENST00000589882 SYCP2Q9BX26 1530 aa13.69□□□□□ -0.22
TREM1-206ENST00000589882 NEO1Q92859 1461 aa13.69□□□□□ -0.22
TREM1-206ENST00000589882 APBB1O00213 710 aa13.69□□□□□ -0.22
TREM1-206ENST00000589882 ZSCAN12O43309 604 aa13.69□□□□□ -0.22
TREM1-206ENST00000589882 ERCC3P19447 782 aa13.69□□□□□ -0.22
TREM1-206ENST00000589882 TXLNAP40222 546 aa13.69□□□□□ -0.22
TREM1-206ENST00000589882 POTEDQ86YR6 584 aa13.69□□□□□ -0.22
TREM1-206ENST00000589882 BICD2Q8TD16 824 aa13.69□□□□□ -0.22
TREM1-206ENST00000589882 NRXN1Q9ULB1 1477 aa13.68□□□□□ -0.22
TREM1-206ENST00000589882 LRRC31Q6UY01 552 aa13.68□□□□□ -0.22
TREM1-206ENST00000589882 JMYQ8N9B5 988 aa13.68□□□□□ -0.22
TREM1-206ENST00000589882 PARD6BQ9BYG5 372 aa13.68□□□□□ -0.22
TREM1-206ENST00000589882 PARP3Q9Y6F1 533 aa13.68□□□□□ -0.22
TREM1-206ENST00000589882 FRMPD1Q5SYB0 1578 aa13.68□□□□□ -0.22
TREM1-206ENST00000589882 EFCAB6Q5THR3 1501 aa13.68□□□□□ -0.22
TREM1-206ENST00000589882 PLCH2O75038 1416 aa13.68□□□□□ -0.22
TREM1-206ENST00000589882 SALL3Q9BXA9 1300 aa13.68□□□□□ -0.22
TREM1-206ENST00000589882 QRICH2Q9H0J4 1663 aa13.68□□□□□ -0.22
TREM1-206ENST00000589882 DIAPH1O60610 1272 aaKnown RBP13.67□□□□□ -0.22
TREM1-206ENST00000589882 GIGYF1O75420 1035 aaPredicted RBP13.67□□□□□ -0.22
TREM1-206ENST00000589882 GNAI3P08754 354 aa13.67□□□□□ -0.22
TREM1-206ENST00000589882 PPP2R3AQ06190 1150 aa13.67□□□□□ -0.22
TREM1-206ENST00000589882 CFAP70Q5T0N1 1121 aa13.67□□□□□ -0.22
TREM1-206ENST00000589882 VPS53Q5VIR6 699 aa13.67□□□□□ -0.22
TREM1-206ENST00000589882 LEO1Q8WVC0 666 aaPredicted RBP13.67□□□□□ -0.22
TREM1-206ENST00000589882 STAP2Q9UGK3 403 aa13.67□□□□□ -0.22
TREM1-206ENST00000589882 SNX14Q9Y5W7 946 aa13.67□□□□□ -0.22
TREM1-206ENST00000589882 CDK12Q9NYV4 1490 aaPredicted RBP13.67□□□□□ -0.22
TREM1-206ENST00000589882 LARP1BQ659C4 914 aaKnown RBP13.67□□□□□ -0.22
TREM1-206ENST00000589882 GBP6Q6ZN66 633 aa13.67□□□□□ -0.22
TREM1-206ENST00000589882 CCDC83Q8IWF9 413 aa13.67□□□□□ -0.22
TREM1-206ENST00000589882 RILPL2Q969X0 211 aa13.67□□□□□ -0.22
TREM1-206ENST00000589882 GBP3Q9H0R5 595 aa13.67□□□□□ -0.22
TREM1-206ENST00000589882 NR1I2O75469 434 aa13.66□□□□□ -0.22
TREM1-206ENST00000589882 TUBBP07437 444 aa13.66□□□□□ -0.22
TREM1-206ENST00000589882 MAP3K9P80192 1104 aa13.66□□□□□ -0.22
TREM1-206ENST00000589882 NFE2L2Q16236 605 aa13.66□□□□□ -0.22
TREM1-206ENST00000589882 C11orf91Q3C1V1 193 aa13.66□□□□□ -0.22
TREM1-206ENST00000589882 FOXR1Q6PIV2 292 aa13.66□□□□□ -0.22
TREM1-206ENST00000589882 C11orf57Q6ZUT1 292 aaPredicted RBP13.66□□□□□ -0.22
TREM1-206ENST00000589882 PDE11AQ9HCR9 933 aa13.66□□□□□ -0.22
TREM1-206ENST00000589882 GNL3LQ9NVN8 582 aaKnown RBP13.66□□□□□ -0.22
TREM1-206ENST00000589882 BSDC1Q9NW68 430 aaPredicted RBP13.66□□□□□ -0.22
TREM1-206ENST00000589882 ADAMTSL3P82987 1691 aa13.66□□□□□ -0.22
TREM1-206ENST00000589882 HNRNPH1P31943 449 aaKnown RBP13.65□□□□□ -0.22
TREM1-206ENST00000589882 SSR1P43307 286 aaKnown RBP13.65□□□□□ -0.22
TREM1-206ENST00000589882 USP5P45974 858 aa13.65□□□□□ -0.22
TREM1-206ENST00000589882 IRX1P78414 480 aaPredicted RBP13.65□□□□□ -0.22
TREM1-206ENST00000589882 NEDD9Q14511 834 aa13.65□□□□□ -0.22
TREM1-206ENST00000589882 PPP2R5AQ15172 486 aa13.65□□□□□ -0.22
TREM1-206ENST00000589882 TRIM65Q6PJ69 517 aa13.65□□□□□ -0.22
TREM1-206ENST00000589882 DHX40Q8IX18 779 aaKnown RBP13.65□□□□□ -0.22
TREM1-206ENST00000589882 TSPYL6Q8N831 410 aa13.65□□□□□ -0.22
TREM1-206ENST00000589882 PRAM1Q96QH2 718 aa13.65□□□□□ -0.22
TREM1-206ENST00000589882 HYPKQ9NX55 129 aa13.65□□□□□ -0.22
TREM1-206ENST00000589882 TRAK1Q9UPV9 953 aa13.65□□□□□ -0.22
TREM1-206ENST00000589882 LRRC7Q96NW7 1537 aa13.65□□□□□ -0.22
TREM1-206ENST00000589882 TMCO5BA8MYB1 307 aa13.65□□□□□ -0.22
TREM1-206ENST00000589882 ARMCX5Q6P1M9 558 aa13.65□□□□□ -0.22
TREM1-206ENST00000589882 FMNL3Q8IVF7 1028 aa13.65□□□□□ -0.22
TREM1-206ENST00000589882 RNF217Q8TC41 542 aa13.65□□□□□ -0.22
TREM1-206ENST00000589882 SGSM3Q96HU1 749 aa13.65□□□□□ -0.22
TREM1-206ENST00000589882 TM6SF1Q9BZW5 370 aa13.65□□□□□ -0.22
TREM1-206ENST00000589882 LRRCC1Q9C099 1032 aa13.65□□□□□ -0.22
TREM1-206ENST00000589882 AKAP2Q9Y2D5 859 aa13.65□□□□□ -0.22
TREM1-206ENST00000589882 MRFAP1Q9Y605 127 aa13.65□□□□□ -0.22
TREM1-206ENST00000589882 CPSF1Q10570 1443 aaKnown RBP13.65□□□□□ -0.22
TREM1-206ENST00000589882 MAP9Q49MG5 647 aa13.64□□□□□ -0.23
TREM1-206ENST00000589882 CNNM3Q8NE01 707 aa13.64□□□□□ -0.23
TREM1-206ENST00000589882 ERCC4Q92889 916 aaPredicted RBP13.64□□□□□ -0.23
TREM1-206ENST00000589882 FAN1Q9Y2M0 1017 aa13.64□□□□□ -0.23
TREM1-206ENST00000589882 ZFYVE9O95405 1425 aa13.63□□□□□ -0.23
TREM1-206ENST00000589882 TMC6Q7Z403 805 aa13.63□□□□□ -0.23
TREM1-206ENST00000589882 MBIPQ9NS73 344 aa13.63□□□□□ -0.23
TREM1-206ENST00000589882 STAG3Q9UJ98 1225 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms