RNA–Protein interactions for RNA: ENST00000589528.1

ACTN4-211, Transcript of actinin alpha 4, humanhuman

TSL 2

Gene ACTN4, Length 441 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-211ENST00000589528 SLC10A5Q5PT55 438 aa20.01■□□□□ 0.79
ACTN4-211ENST00000589528 RTFDC1Q9BY42 306 aaPredicted RBP20.01■□□□□ 0.79
ACTN4-211ENST00000589528 GLIS2Q9BZE0 524 aaPredicted RBP20.01■□□□□ 0.79
ACTN4-211ENST00000589528 CDHR2Q9BYE9 1310 aa20.01■□□□□ 0.79
ACTN4-211ENST00000589528 RAD17O75943 681 aa20■□□□□ 0.79
ACTN4-211ENST00000589528 MLLT1Q03111 559 aaPredicted RBP20■□□□□ 0.79
ACTN4-211ENST00000589528 KIAA2012Q0VF49 1180 aa20■□□□□ 0.79
ACTN4-211ENST00000589528 AIMP1Q12904 312 aaKnown RBP20■□□□□ 0.79
ACTN4-211ENST00000589528 SP8Q8IXZ3 490 aa20■□□□□ 0.79
ACTN4-211ENST00000589528 CFAP44Q96MT7 982 aa20■□□□□ 0.79
ACTN4-211ENST00000589528 TAF1P21675 1872 aa20■□□□□ 0.79
ACTN4-211ENST00000589528 ANXA1P04083 346 aa19.99■□□□□ 0.79
ACTN4-211ENST00000589528 HCLS1P14317 486 aaPredicted RBP19.99■□□□□ 0.79
ACTN4-211ENST00000589528 NECTIN2Q92692 538 aa19.99■□□□□ 0.79
ACTN4-211ENST00000589528 TRMT112Q9UI30 125 aaKnown RBP19.99■□□□□ 0.79
ACTN4-211ENST00000589528 H7C1D1 291 aa19.98■□□□□ 0.79
ACTN4-211ENST00000589528 PDIA6Q15084 440 aa19.98■□□□□ 0.79
ACTN4-211ENST00000589528 PROSER3Q2NL68 480 aa19.98■□□□□ 0.79
ACTN4-211ENST00000589528 CDC37L1Q7L3B6 337 aa19.98■□□□□ 0.79
ACTN4-211ENST00000589528 ZC3H15Q8WU90 426 aaKnown RBP19.98■□□□□ 0.79
ACTN4-211ENST00000589528 HHIPL1Q96JK4 782 aa19.98■□□□□ 0.79
ACTN4-211ENST00000589528 RIPK4P57078 832 aa19.97■□□□□ 0.79
ACTN4-211ENST00000589528 GRAPQ13588 217 aa19.97■□□□□ 0.79
ACTN4-211ENST00000589528 COPS6Q7L5N1 327 aa19.97■□□□□ 0.79
ACTN4-211ENST00000589528 GRAPLQ8TC17 118 aaPredicted RBP19.97■□□□□ 0.79
ACTN4-211ENST00000589528 CNOT7Q9UIV1 285 aaKnown RBP19.97■□□□□ 0.79
ACTN4-211ENST00000589528 SH3TC1Q8TE82 1336 aa19.97■□□□□ 0.79
ACTN4-211ENST00000589528 BRPF1P55201 1214 aaPredicted RBP19.96■□□□□ 0.79
ACTN4-211ENST00000589528 LRP10Q7Z4F1 713 aa19.96■□□□□ 0.79
ACTN4-211ENST00000589528 NLRP10Q86W26 655 aa19.96■□□□□ 0.79
ACTN4-211ENST00000589528 XAGE3Q8WTP9 111 aa19.96■□□□□ 0.79
ACTN4-211ENST00000589528 POLR2AP24928 1970 aaKnown RBP19.95■□□□□ 0.78
ACTN4-211ENST00000589528 LMOD3Q0VAK6 560 aa19.95■□□□□ 0.78
ACTN4-211ENST00000589528 TMC4Q7Z404 712 aa19.95■□□□□ 0.78
ACTN4-211ENST00000589528 MICALL2Q8IY33 904 aa19.95■□□□□ 0.78
ACTN4-211ENST00000589528 TRPM4Q8TD43 1214 aa19.95■□□□□ 0.78
ACTN4-211ENST00000589528 BABAM1Q9NWV8 329 aa19.95■□□□□ 0.78
ACTN4-211ENST00000589528 PGAP2Q9UHJ9 254 aa19.95■□□□□ 0.78
ACTN4-211ENST00000589528 TCIRG1Q13488 830 aa19.94■□□□□ 0.78
ACTN4-211ENST00000589528 HIRAP54198 1017 aaPredicted RBP19.93■□□□□ 0.78
ACTN4-211ENST00000589528 NOGQ13253 232 aa19.93■□□□□ 0.78
ACTN4-211ENST00000589528 MCOLN1Q9GZU1 580 aa19.93■□□□□ 0.78
ACTN4-211ENST00000589528 YDJCA8MPS7 323 aa19.92■□□□□ 0.78
ACTN4-211ENST00000589528 HUNKP57058 714 aa19.92■□□□□ 0.78
ACTN4-211ENST00000589528 DGKZQ13574 1117 aa19.92■□□□□ 0.78
ACTN4-211ENST00000589528 WASHC4Q2M389 1173 aa19.92■□□□□ 0.78
ACTN4-211ENST00000589528 USP48Q86UV5 1035 aa19.92■□□□□ 0.78
ACTN4-211ENST00000589528 ZNF428Q96B54 188 aa19.92■□□□□ 0.78
ACTN4-211ENST00000589528 LRRC37AA6NMS7 1700 aa19.91■□□□□ 0.78
ACTN4-211ENST00000589528 SHTN1A0MZ66 631 aa19.91■□□□□ 0.78
ACTN4-211ENST00000589528 SLC34A2O95436 690 aa19.91■□□□□ 0.78
ACTN4-211ENST00000589528 NSFL1CQ9UNZ2 370 aaKnown RBP19.91■□□□□ 0.78
ACTN4-211ENST00000589528 ZBTB12Q9Y330 459 aaPredicted RBP19.91■□□□□ 0.78
ACTN4-211ENST00000589528 DDX60Q8IY21 1712 aaKnown RBP19.9■□□□□ 0.78
ACTN4-211ENST00000589528 PSMD14O00487 310 aa19.9■□□□□ 0.78
ACTN4-211ENST00000589528 RGS19P49795 217 aa19.9■□□□□ 0.78
ACTN4-211ENST00000589528 DBNDD1Q9H9R9 158 aa19.9■□□□□ 0.78
ACTN4-211ENST00000589528 LAS1LQ9Y4W2 734 aaKnown RBP19.9■□□□□ 0.78
ACTN4-211ENST00000589528 DUOX1Q9NRD9 1551 aa19.9■□□□□ 0.78
ACTN4-211ENST00000589528 AKAP11Q9UKA4 1901 aa19.9■□□□□ 0.78
ACTN4-211ENST00000589528 C6orf229H3BNL8 230 aa19.89■□□□□ 0.77
ACTN4-211ENST00000589528 RIMBP2O15034 1052 aa19.89■□□□□ 0.77
ACTN4-211ENST00000589528 TBC1D10BQ4KMP7 808 aaPredicted RBP19.89■□□□□ 0.77
ACTN4-211ENST00000589528 SAMD7Q7Z3H4 446 aa19.89■□□□□ 0.77
ACTN4-211ENST00000589528 KRT26Q7Z3Y9 468 aa19.89■□□□□ 0.77
ACTN4-211ENST00000589528 DPF2Q92785 391 aa19.89■□□□□ 0.77
ACTN4-211ENST00000589528 DCPSQ96C86 337 aaKnown RBP19.89■□□□□ 0.77
ACTN4-211ENST00000589528 TMPOP42166 694 aaKnown RBP19.88■□□□□ 0.77
ACTN4-211ENST00000589528 NEUROD2Q15784 382 aa19.88■□□□□ 0.77
ACTN4-211ENST00000589528 C2orf69Q8N8R5 385 aa19.88■□□□□ 0.77
ACTN4-211ENST00000589528 EYA3Q99504 573 aa19.88■□□□□ 0.77
ACTN4-211ENST00000589528 RBM26Q5T8P6 1007 aaKnown RBP19.87■□□□□ 0.77
ACTN4-211ENST00000589528 RGMBQ6NW40 437 aa19.87■□□□□ 0.77
ACTN4-211ENST00000589528 GBA2Q9HCG7 927 aaPredicted RBP19.87■□□□□ 0.77
ACTN4-211ENST00000589528 CHPF2Q9P2E5 772 aa19.87■□□□□ 0.77
ACTN4-211ENST00000589528 G3V3G9 751 aa19.86■□□□□ 0.77
ACTN4-211ENST00000589528 ECE2O60344 883 aa19.86■□□□□ 0.77
ACTN4-211ENST00000589528 RPS12P25398 132 aaKnown RBP19.86■□□□□ 0.77
ACTN4-211ENST00000589528 DCAF8Q5TAQ9 597 aa19.86■□□□□ 0.77
ACTN4-211ENST00000589528 HDGFL1Q5TGJ6 251 aa19.86■□□□□ 0.77
ACTN4-211ENST00000589528 PLBD2Q8NHP8 589 aa19.86■□□□□ 0.77
ACTN4-211ENST00000589528 CELF1Q92879 486 aaKnown RBP19.86■□□□□ 0.77
ACTN4-211ENST00000589528 FAM89AQ96GI7 184 aa19.86■□□□□ 0.77
ACTN4-211ENST00000589528 ZNF157P51786 506 aaPredicted RBP19.85■□□□□ 0.77
ACTN4-211ENST00000589528 KRT24Q2M2I5 525 aa19.85■□□□□ 0.77
ACTN4-211ENST00000589528 RTL5Q5HYW3 569 aaPredicted RBP19.85■□□□□ 0.77
ACTN4-211ENST00000589528 ANKRD13DQ6ZTN6 518 aa19.85■□□□□ 0.77
ACTN4-211ENST00000589528 ZIC5Q96T25 663 aa19.85■□□□□ 0.77
ACTN4-211ENST00000589528 ATP5J2-PTCD1G3V325 749 aa19.84■□□□□ 0.77
ACTN4-211ENST00000589528 DOK7Q18PE1 504 aa19.84■□□□□ 0.77
ACTN4-211ENST00000589528 DLK2Q6UY11 383 aa19.84■□□□□ 0.77
ACTN4-211ENST00000589528 CCDC102AQ96A19 550 aa19.84■□□□□ 0.77
ACTN4-211ENST00000589528 ADM5C9JUS6 153 aa19.83■□□□□ 0.77
ACTN4-211ENST00000589528 GPSM2P81274 684 aa19.83■□□□□ 0.77
ACTN4-211ENST00000589528 SF3B3Q15393 1217 aaKnown RBP19.83■□□□□ 0.77
ACTN4-211ENST00000589528 KIF4BQ2VIQ3 1234 aa19.83■□□□□ 0.77
ACTN4-211ENST00000589528 SULF1Q8IWU6 871 aa19.83■□□□□ 0.77
ACTN4-211ENST00000589528 CCDC146Q8IYE0 955 aa19.83■□□□□ 0.77
ACTN4-211ENST00000589528 DBF4Q9UBU7 674 aaPredicted RBP19.83■□□□□ 0.77
ACTN4-211ENST00000589528 POLLQ9UGP5 575 aa19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms