RNA–Protein interactions for RNA: ENST00000589347.1

CLPTM1-211, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 3

Gene CLPTM1, Length 638 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-211ENST00000589347 MAP2K1Q02750 393 aaPredicted RBP13.63□□□□□ -0.23
CLPTM1-211ENST00000589347 FAM9BQ8IZU0 186 aa13.63□□□□□ -0.23
CLPTM1-211ENST00000589347 TSR2Q969E8 191 aaKnown RBP13.63□□□□□ -0.23
CLPTM1-211ENST00000589347 WDR63Q8IWG1 891 aa13.62□□□□□ -0.23
CLPTM1-211ENST00000589347 WDR33Q9C0J8 1336 aaKnown RBP13.62□□□□□ -0.23
CLPTM1-211ENST00000589347 CCDC85CA6NKD9 419 aa13.61□□□□□ -0.23
CLPTM1-211ENST00000589347 TWISTNBQ3B726 338 aaPredicted RBP13.61□□□□□ -0.23
CLPTM1-211ENST00000589347 SLC10A5Q5PT55 438 aa13.61□□□□□ -0.23
CLPTM1-211ENST00000589347 DDX46Q7L014 1031 aaKnown RBP13.61□□□□□ -0.23
CLPTM1-211ENST00000589347 C8orf58Q8NAV2 365 aa13.61□□□□□ -0.23
CLPTM1-211ENST00000589347 C7orf43Q8WVR3 580 aa13.61□□□□□ -0.23
CLPTM1-211ENST00000589347 PSMD1Q99460 953 aa13.61□□□□□ -0.23
CLPTM1-211ENST00000589347 ISCA1Q9BUE6 129 aa13.61□□□□□ -0.23
CLPTM1-211ENST00000589347 ABCC4O15439 1325 aa13.61□□□□□ -0.23
CLPTM1-211ENST00000589347 FANCIQ9NVI1 1328 aa13.61□□□□□ -0.23
CLPTM1-211ENST00000589347 IARSP41252 1262 aaKnown RBP13.6□□□□□ -0.23
CLPTM1-211ENST00000589347 DEFB115Q30KQ5 88 aa13.6□□□□□ -0.23
CLPTM1-211ENST00000589347 SNED1Q8TER0 1413 aa13.6□□□□□ -0.23
CLPTM1-211ENST00000589347 MYH16Q9H6N6 1097 aa13.6□□□□□ -0.23
CLPTM1-211ENST00000589347 SALL2Q9Y467 1007 aaPredicted RBP13.6□□□□□ -0.23
CLPTM1-211ENST00000589347 NEXNQ0ZGT2 675 aa13.59□□□□□ -0.23
CLPTM1-211ENST00000589347 TMC4Q7Z404 712 aa13.59□□□□□ -0.23
CLPTM1-211ENST00000589347 PHAXQ9H814 394 aaKnown RBP13.59□□□□□ -0.23
CLPTM1-211ENST00000589347 ZNF277Q9NRM2 450 aaPredicted RBP13.59□□□□□ -0.23
CLPTM1-211ENST00000589347 ATP5J2-PTCD1G3V325 749 aa13.58□□□□□ -0.24
CLPTM1-211ENST00000589347 HCLS1P14317 486 aaPredicted RBP13.58□□□□□ -0.24
CLPTM1-211ENST00000589347 TRIM28Q13263 835 aaKnown RBP13.58□□□□□ -0.24
CLPTM1-211ENST00000589347 GRAPQ13588 217 aa13.58□□□□□ -0.24
CLPTM1-211ENST00000589347 C3orf67Q6ZVT6 689 aa13.58□□□□□ -0.24
CLPTM1-211ENST00000589347 SYNE4Q8N205 404 aa13.58□□□□□ -0.24
CLPTM1-211ENST00000589347 CCDC191Q8NCU4 936 aa13.58□□□□□ -0.24
CLPTM1-211ENST00000589347 SUPT20HQ8NEM7 779 aa13.58□□□□□ -0.24
CLPTM1-211ENST00000589347 GRAPLQ8TC17 118 aaPredicted RBP13.58□□□□□ -0.24
CLPTM1-211ENST00000589347 JDP2Q8WYK2 163 aa13.58□□□□□ -0.24
CLPTM1-211ENST00000589347 MYD88Q99836 296 aa13.58□□□□□ -0.24
CLPTM1-211ENST00000589347 BBOX1O75936 387 aa13.57□□□□□ -0.24
CLPTM1-211ENST00000589347 OLFM4Q6UX06 510 aa13.57□□□□□ -0.24
CLPTM1-211ENST00000589347 TSPYL6Q8N831 410 aa13.57□□□□□ -0.24
CLPTM1-211ENST00000589347 FAM89AQ96GI7 184 aa13.57□□□□□ -0.24
CLPTM1-211ENST00000589347 CWC25Q9NXE8 425 aaPredicted RBP13.57□□□□□ -0.24
CLPTM1-211ENST00000589347 HACL1Q9UJ83 578 aa13.57□□□□□ -0.24
CLPTM1-211ENST00000589347 ATP6V0A2Q9Y487 856 aa13.57□□□□□ -0.24
CLPTM1-211ENST00000589347 ZNF541Q9H0D2 1346 aa13.57□□□□□ -0.24
CLPTM1-211ENST00000589347 PSME4Q14997 1843 aa13.56□□□□□ -0.24
CLPTM1-211ENST00000589347 IRS4O14654 1257 aaPredicted RBP13.56□□□□□ -0.24
CLPTM1-211ENST00000589347 TCERG1O14776 1098 aaKnown RBP13.56□□□□□ -0.24
CLPTM1-211ENST00000589347 EPHX2P34913 555 aa13.56□□□□□ -0.24
CLPTM1-211ENST00000589347 EIF6P56537 245 aaKnown RBP13.56□□□□□ -0.24
CLPTM1-211ENST00000589347 EAPPQ56P03 285 aaPredicted RBP13.56□□□□□ -0.24
CLPTM1-211ENST00000589347 PNMA8AQ86V59 439 aaPredicted RBP13.56□□□□□ -0.24
CLPTM1-211ENST00000589347 CNTROBQ8N137 903 aa13.56□□□□□ -0.24
CLPTM1-211ENST00000589347 LARGE2Q8N3Y3 721 aa13.56□□□□□ -0.24
CLPTM1-211ENST00000589347 ZBTB38Q8NAP3 1195 aaPredicted RBP13.56□□□□□ -0.24
CLPTM1-211ENST00000589347 METTL22Q9BUU2 404 aaPredicted RBP13.56□□□□□ -0.24
CLPTM1-211ENST00000589347 MAP3K2Q9Y2U5 619 aa13.56□□□□□ -0.24
CLPTM1-211ENST00000589347 MAP1SQ66K74 1059 aaPredicted RBP13.55□□□□□ -0.24
CLPTM1-211ENST00000589347 DPP8Q6V1X1 898 aaPredicted RBP13.55□□□□□ -0.24
CLPTM1-211ENST00000589347 KSR2Q6VAB6 950 aa13.55□□□□□ -0.24
CLPTM1-211ENST00000589347 SP8Q8IXZ3 490 aa13.55□□□□□ -0.24
CLPTM1-211ENST00000589347 NIM1KQ8IY84 436 aa13.55□□□□□ -0.24
CLPTM1-211ENST00000589347 VPS33BQ9H267 617 aa13.55□□□□□ -0.24
CLPTM1-211ENST00000589347 DUOX1Q9NRD9 1551 aa13.54□□□□□ -0.24
CLPTM1-211ENST00000589347 PPIP5K2O43314 1243 aa13.54□□□□□ -0.24
CLPTM1-211ENST00000589347 PCCAP05165 728 aaPredicted RBP13.54□□□□□ -0.24
CLPTM1-211ENST00000589347 FLIIQ13045 1269 aa13.54□□□□□ -0.24
CLPTM1-211ENST00000589347 SF3B3Q15393 1217 aaKnown RBP13.54□□□□□ -0.24
CLPTM1-211ENST00000589347 CCDC152Q4G0S7 254 aa13.54□□□□□ -0.24
CLPTM1-211ENST00000589347 MPNDQ8N594 471 aa13.54□□□□□ -0.24
CLPTM1-211ENST00000589347 CAPNS2Q96L46 248 aa13.54□□□□□ -0.24
CLPTM1-211ENST00000589347 ABT1Q9ULW3 272 aaKnown RBP13.54□□□□□ -0.24
CLPTM1-211ENST00000589347 CDHR2Q9BYE9 1310 aa13.54□□□□□ -0.24
CLPTM1-211ENST00000589347 TRPM7Q96QT4 1865 aa13.54□□□□□ -0.24
CLPTM1-211ENST00000589347 PI4KAP2A4QPH2 592 aa13.53□□□□□ -0.24
CLPTM1-211ENST00000589347 PDE8AO60658 829 aa13.53□□□□□ -0.24
CLPTM1-211ENST00000589347 SLC4A2P04920 1241 aa13.53□□□□□ -0.24
CLPTM1-211ENST00000589347 EXOSC9Q06265 439 aaKnown RBP13.53□□□□□ -0.24
CLPTM1-211ENST00000589347 FKBP5Q13451 457 aaPredicted RBP13.53□□□□□ -0.24
CLPTM1-211ENST00000589347 RTL5Q5HYW3 569 aaPredicted RBP13.53□□□□□ -0.24
CLPTM1-211ENST00000589347 PI4KAP1Q8N8J0 262 aa13.53□□□□□ -0.24
CLPTM1-211ENST00000589347 MCOLN1Q9GZU1 580 aa13.53□□□□□ -0.24
CLPTM1-211ENST00000589347 COL4A5P29400 1685 aa13.53□□□□□ -0.24
CLPTM1-211ENST00000589347 A0A1B0GUL6 1792 aa13.53□□□□□ -0.24
CLPTM1-211ENST00000589347 FZD9O00144 591 aa13.52□□□□□ -0.25
CLPTM1-211ENST00000589347 LMOD1P29536 600 aaPredicted RBP13.52□□□□□ -0.25
CLPTM1-211ENST00000589347 ECE1P42892 770 aa13.52□□□□□ -0.25
CLPTM1-211ENST00000589347 GPC2Q8N158 579 aa13.52□□□□□ -0.25
CLPTM1-211ENST00000589347 ZNF428Q96B54 188 aa13.52□□□□□ -0.25
CLPTM1-211ENST00000589347 BEGAINQ9BUH8 593 aa13.52□□□□□ -0.25
CLPTM1-211ENST00000589347 RTFDC1Q9BY42 306 aaPredicted RBP13.52□□□□□ -0.25
CLPTM1-211ENST00000589347 CCER2I3L3R5 266 aa13.51□□□□□ -0.25
CLPTM1-211ENST00000589347 CA12O43570 354 aa13.51□□□□□ -0.25
CLPTM1-211ENST00000589347 AOC3Q16853 763 aa13.51□□□□□ -0.25
CLPTM1-211ENST00000589347 GPR101Q96P66 508 aaPredicted RBP13.51□□□□□ -0.25
CLPTM1-211ENST00000589347 CLEC11AQ9Y240 323 aa13.51□□□□□ -0.25
CLPTM1-211ENST00000589347 NEURL1BA8MQ27 555 aa13.5□□□□□ -0.25
CLPTM1-211ENST00000589347 VAMP4O75379 141 aa13.5□□□□□ -0.25
CLPTM1-211ENST00000589347 CYP4F22Q6NT55 531 aa13.5□□□□□ -0.25
CLPTM1-211ENST00000589347 DNAAF4Q8WXU2 420 aa13.5□□□□□ -0.25
CLPTM1-211ENST00000589347 COL4A1P02462 1669 aa13.5□□□□□ -0.25
CLPTM1-211ENST00000589347 CASP8AP2Q9UKL3 1982 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms