RNA–Protein interactions for RNA: ENST00000589293.5

LINC01539-202, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 4

Gene LINC01539, Length 580 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-202ENST00000589293 C1QTNF8P60827 252 aa7.78□□□□□ -1.16
LINC01539-202ENST00000589293 CCDC24Q8N4L8 307 aa7.78□□□□□ -1.16
LINC01539-202ENST00000589293 OCSTAMPQ9BR26 566 aa7.78□□□□□ -1.16
LINC01539-202ENST00000589293 UNC93B1Q9H1C4 597 aa7.78□□□□□ -1.16
LINC01539-202ENST00000589293 BTAF1O14981 1849 aa7.78□□□□□ -1.16
LINC01539-202ENST00000589293 CGNL1Q0VF96 1302 aa7.78□□□□□ -1.16
LINC01539-202ENST00000589293 ANKRD36BQ8N2N9 1353 aa7.77□□□□□ -1.17
LINC01539-202ENST00000589293 HOXC9P31274 260 aa7.77□□□□□ -1.17
LINC01539-202ENST00000589293 CTHP32929 405 aa7.77□□□□□ -1.17
LINC01539-202ENST00000589293 TMF1P82094 1093 aa7.77□□□□□ -1.17
LINC01539-202ENST00000589293 CDCA8Q53HL2 280 aa7.77□□□□□ -1.17
LINC01539-202ENST00000589293 FLAD1Q8NFF5 587 aa7.77□□□□□ -1.17
LINC01539-202ENST00000589293 ZMYND15Q9H091 742 aa7.77□□□□□ -1.17
LINC01539-202ENST00000589293 LRRC4BQ9NT99 713 aa7.77□□□□□ -1.17
LINC01539-202ENST00000589293 NDUFB9Q9Y6M9 179 aa7.77□□□□□ -1.17
LINC01539-202ENST00000589293 MAP3K19Q56UN5 1328 aa7.77□□□□□ -1.17
LINC01539-202ENST00000589293 FAM208AQ9UK61 1670 aaKnown RBP7.76□□□□□ -1.17
LINC01539-202ENST00000589293 CHD4Q14839 1912 aa7.76□□□□□ -1.17
LINC01539-202ENST00000589293 A6NJR5 290 aa7.76□□□□□ -1.17
LINC01539-202ENST00000589293 LIAT1Q6ZQX7 453 aa7.76□□□□□ -1.17
LINC01539-202ENST00000589293 PNPLA7Q6ZV29 1317 aa7.76□□□□□ -1.17
LINC01539-202ENST00000589293 RTL1A6NKG5 1358 aa7.75□□□□□ -1.17
LINC01539-202ENST00000589293 ST20-MTHFSA0A0A6YYL1 179 aa7.75□□□□□ -1.17
LINC01539-202ENST00000589293 KCNQ4P56696 695 aa7.75□□□□□ -1.17
LINC01539-202ENST00000589293 SMARCC1Q92922 1105 aaPredicted RBP7.75□□□□□ -1.17
LINC01539-202ENST00000589293 FKBPLQ9UIM3 349 aa7.75□□□□□ -1.17
LINC01539-202ENST00000589293 USP54Q70EL1 1684 aa7.75□□□□□ -1.17
LINC01539-202ENST00000589293 PCDH11XQ9BZA7 1347 aa7.75□□□□□ -1.17
LINC01539-202ENST00000589293 PCDH11YQ9BZA8 1340 aa7.75□□□□□ -1.17
LINC01539-202ENST00000589293 CD163L1Q9NR16 1453 aa7.75□□□□□ -1.17
LINC01539-202ENST00000589293 ABL2P42684 1182 aa7.74□□□□□ -1.17
LINC01539-202ENST00000589293 RRS1Q15050 365 aaKnown RBP7.74□□□□□ -1.17
LINC01539-202ENST00000589293 MSL1Q68DK7 614 aa7.74□□□□□ -1.17
LINC01539-202ENST00000589293 MPRIPQ6WCQ1 1025 aa7.74□□□□□ -1.17
LINC01539-202ENST00000589293 USHBP1Q8N6Y0 703 aa7.74□□□□□ -1.17
LINC01539-202ENST00000589293 GGNBP2Q9H3C7 697 aa7.74□□□□□ -1.17
LINC01539-202ENST00000589293 PAPPAQ13219 1627 aa7.74□□□□□ -1.17
LINC01539-202ENST00000589293 NSD3Q9BZ95 1437 aa7.73□□□□□ -1.17
LINC01539-202ENST00000589293 PPM1GO15355 546 aaPredicted RBP7.73□□□□□ -1.17
LINC01539-202ENST00000589293 SKOR1P84550 965 aa7.73□□□□□ -1.17
LINC01539-202ENST00000589293 C4orf48Q5BLP8 95 aa7.73□□□□□ -1.17
LINC01539-202ENST00000589293 NLGN2Q8NFZ4 835 aa7.73□□□□□ -1.17
LINC01539-202ENST00000589293 BAP1Q92560 729 aa7.73□□□□□ -1.17
LINC01539-202ENST00000589293 POM121CA8CG34 1229 aa7.72□□□□□ -1.17
LINC01539-202ENST00000589293 FBLN1P23142 703 aa7.72□□□□□ -1.17
LINC01539-202ENST00000589293 GGCXP38435 758 aa7.72□□□□□ -1.17
LINC01539-202ENST00000589293 TRIM32Q13049 653 aa7.72□□□□□ -1.17
LINC01539-202ENST00000589293 LINC01559Q495D7 138 aa7.72□□□□□ -1.17
LINC01539-202ENST00000589293 NBPF6Q5VWK0 638 aa7.72□□□□□ -1.17
LINC01539-202ENST00000589293 COL23A1Q86Y22 540 aaPredicted RBP7.72□□□□□ -1.17
LINC01539-202ENST00000589293 NBPF4Q96M43 638 aa7.72□□□□□ -1.17
LINC01539-202ENST00000589293 C1orf115Q9H7X2 142 aa7.72□□□□□ -1.17
LINC01539-202ENST00000589293 SPG7Q9UQ90 795 aa7.72□□□□□ -1.17
LINC01539-202ENST00000589293 CD2APQ9Y5K6 639 aa7.72□□□□□ -1.17
LINC01539-202ENST00000589293 DOT1LQ8TEK3 1739 aa7.72□□□□□ -1.17
LINC01539-202ENST00000589293 FLT4P35916 1363 aa7.71□□□□□ -1.17
LINC01539-202ENST00000589293 PALLDQ8WX93 1383 aa7.71□□□□□ -1.17
LINC01539-202ENST00000589293 FYB1O15117 783 aa7.71□□□□□ -1.18
LINC01539-202ENST00000589293 TRAK2O60296 914 aa7.71□□□□□ -1.18
LINC01539-202ENST00000589293 FBXO45P0C2W1 286 aa7.71□□□□□ -1.18
LINC01539-202ENST00000589293 SH3BP2P78314 561 aa7.71□□□□□ -1.18
LINC01539-202ENST00000589293 SH3BP5LQ7L8J4 393 aa7.71□□□□□ -1.18
LINC01539-202ENST00000589293 SH3RF1Q7Z6J0 888 aa7.71□□□□□ -1.18
LINC01539-202ENST00000589293 FOXJ1Q92949 421 aa7.71□□□□□ -1.18
LINC01539-202ENST00000589293 QSER1Q2KHR3 1735 aa7.71□□□□□ -1.18
LINC01539-202ENST00000589293 MEGF6O75095 1541 aa7.71□□□□□ -1.18
LINC01539-202ENST00000589293 INSRP06213 1382 aa7.71□□□□□ -1.18
LINC01539-202ENST00000589293 APBB1O00213 710 aa7.7□□□□□ -1.18
LINC01539-202ENST00000589293 HSP90AB2PQ58FF8 381 aa7.7□□□□□ -1.18
LINC01539-202ENST00000589293 ZNF511Q8NB15 262 aa7.7□□□□□ -1.18
LINC01539-202ENST00000589293 ADAMTS19Q8TE59 1207 aa7.7□□□□□ -1.18
LINC01539-202ENST00000589293 ZNF526Q8TF50 670 aaPredicted RBP7.7□□□□□ -1.18
LINC01539-202ENST00000589293 TESK2Q96S53 571 aa7.7□□□□□ -1.18
LINC01539-202ENST00000589293 POLR3GLQ9BT43 218 aa7.7□□□□□ -1.18
LINC01539-202ENST00000589293 TMOD3Q9NYL9 352 aa7.7□□□□□ -1.18
LINC01539-202ENST00000589293 KIF24Q5T7B8 1368 aa7.7□□□□□ -1.18
LINC01539-202ENST00000589293 YBX3P16989 372 aaKnown RBP eCLIP7.69□□□□□ -1.18
LINC01539-202ENST00000589293 VAC14Q08AM6 782 aa7.69□□□□□ -1.18
LINC01539-202ENST00000589293 ZC3H4Q9UPT8 1303 aaKnown RBP7.69□□□□□ -1.18
LINC01539-202ENST00000589293 NSD2O96028 1365 aa7.69□□□□□ -1.18
LINC01539-202ENST00000589293 LY75O60449 1722 aa7.69□□□□□ -1.18
LINC01539-202ENST00000589293 RAD21O60216 631 aa7.68□□□□□ -1.18
LINC01539-202ENST00000589293 SSFA2P28290 1259 aa7.68□□□□□ -1.18
LINC01539-202ENST00000589293 RPIAP49247 311 aa7.68□□□□□ -1.18
LINC01539-202ENST00000589293 PDXDC2PQ6P474 469 aa7.68□□□□□ -1.18
LINC01539-202ENST00000589293 ATP10DQ9P241 1426 aa7.68□□□□□ -1.18
LINC01539-202ENST00000589293 LOC102724428A0A0B4J2F2 783 aa7.67□□□□□ -1.18
LINC01539-202ENST00000589293 CYP27B1O15528 508 aa7.67□□□□□ -1.18
LINC01539-202ENST00000589293 SIK1P57059 783 aa7.67□□□□□ -1.18
LINC01539-202ENST00000589293 IFNL2Q8IZJ0 200 aa7.67□□□□□ -1.18
LINC01539-202ENST00000589293 WWC3Q9ULE0 1092 aa7.67□□□□□ -1.18
LINC01539-202ENST00000589293 IGSF1Q8N6C5 1336 aa7.67□□□□□ -1.18
LINC01539-202ENST00000589293 C5P01031 1676 aa7.67□□□□□ -1.18
LINC01539-202ENST00000589293 ZBBXA8MT70 800 aa7.66□□□□□ -1.18
LINC01539-202ENST00000589293 HSP90AB1P08238 724 aaKnown RBP7.66□□□□□ -1.18
LINC01539-202ENST00000589293 SLC19A1P41440 591 aa7.66□□□□□ -1.18
LINC01539-202ENST00000589293 TRAPPC3LQ5T215 181 aa7.66□□□□□ -1.18
LINC01539-202ENST00000589293 SPRYD7Q5W111 196 aa7.66□□□□□ -1.18
LINC01539-202ENST00000589293 ARMC2Q8NEN0 867 aa7.66□□□□□ -1.18
LINC01539-202ENST00000589293 PIGBQ92521 554 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms