RNA–Protein interactions for RNA: ENST00000588472.6

SDF2-207, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 681 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-207ENST00000588472 TIAM2Q8IVF5 1701 aa11.32□□□□□ -0.6
SDF2-207ENST00000588472 BBOX1O75936 387 aa11.32□□□□□ -0.6
SDF2-207ENST00000588472 FLIIQ13045 1269 aa11.32□□□□□ -0.6
SDF2-207ENST00000588472 GRAPQ13588 217 aa11.32□□□□□ -0.6
SDF2-207ENST00000588472 CWF19L2Q2TBE0 894 aaKnown RBP11.32□□□□□ -0.6
SDF2-207ENST00000588472 DIEXFQ68CQ4 756 aaKnown RBP11.32□□□□□ -0.6
SDF2-207ENST00000588472 CC2D2BQ6DHV5 1058 aa11.32□□□□□ -0.6
SDF2-207ENST00000588472 CCDC191Q8NCU4 936 aa11.32□□□□□ -0.6
SDF2-207ENST00000588472 GRAPLQ8TC17 118 aaPredicted RBP11.32□□□□□ -0.6
SDF2-207ENST00000588472 ATP6V0A2Q9Y487 856 aa11.32□□□□□ -0.6
SDF2-207ENST00000588472 CCER2I3L3R5 266 aa11.31□□□□□ -0.6
SDF2-207ENST00000588472 IGKV5-2P06315 115 aa11.31□□□□□ -0.6
SDF2-207ENST00000588472 DPP8Q6V1X1 898 aaPredicted RBP11.31□□□□□ -0.6
SDF2-207ENST00000588472 LARGE2Q8N3Y3 721 aa11.31□□□□□ -0.6
SDF2-207ENST00000588472 JDP2Q8WYK2 163 aa11.31□□□□□ -0.6
SDF2-207ENST00000588472 LAMB2P55268 1798 aa11.31□□□□□ -0.6
SDF2-207ENST00000588472 TAF1P21675 1872 aa11.3□□□□□ -0.6
SDF2-207ENST00000588472 PPIP5K2O43314 1243 aa11.3□□□□□ -0.6
SDF2-207ENST00000588472 PCCAP05165 728 aaPredicted RBP11.3□□□□□ -0.6
SDF2-207ENST00000588472 SF3B3Q15393 1217 aaKnown RBP11.3□□□□□ -0.6
SDF2-207ENST00000588472 SP8Q8IXZ3 490 aa11.3□□□□□ -0.6
SDF2-207ENST00000588472 MIER1Q8N108 512 aa11.3□□□□□ -0.6
SDF2-207ENST00000588472 MPNDQ8N594 471 aa11.3□□□□□ -0.6
SDF2-207ENST00000588472 CELF1Q92879 486 aaKnown RBP11.3□□□□□ -0.6
SDF2-207ENST00000588472 PSMD1Q99460 953 aa11.3□□□□□ -0.6
SDF2-207ENST00000588472 GJA3Q9Y6H8 435 aa11.3□□□□□ -0.6
SDF2-207ENST00000588472 ZNF541Q9H0D2 1346 aa11.3□□□□□ -0.6
SDF2-207ENST00000588472 DDX60Q8IY21 1712 aaKnown RBP11.29□□□□□ -0.6
SDF2-207ENST00000588472 NEURL1BA8MQ27 555 aa11.29□□□□□ -0.6
SDF2-207ENST00000588472 F6X3S4 739 aa11.29□□□□□ -0.6
SDF2-207ENST00000588472 PDE8AO60658 829 aa11.29□□□□□ -0.6
SDF2-207ENST00000588472 HSP90B1P14625 803 aaKnown RBP11.29□□□□□ -0.6
SDF2-207ENST00000588472 AOC3Q16853 763 aa11.29□□□□□ -0.6
SDF2-207ENST00000588472 GRIPAP1Q4V328 841 aa11.29□□□□□ -0.6
SDF2-207ENST00000588472 UBE3BQ7Z3V4 1068 aa11.29□□□□□ -0.6
SDF2-207ENST00000588472 DNAAF4Q8WXU2 420 aa11.29□□□□□ -0.6
SDF2-207ENST00000588472 CDCA7LQ96GN5 454 aa11.29□□□□□ -0.6
SDF2-207ENST00000588472 SEC31BQ9NQW1 1179 aa11.29□□□□□ -0.6
SDF2-207ENST00000588472 CREBZFQ9NS37 354 aa11.29□□□□□ -0.6
SDF2-207ENST00000588472 NSFL1CQ9UNZ2 370 aaKnown RBP11.29□□□□□ -0.6
SDF2-207ENST00000588472 ZNF521Q96K83 1311 aa11.29□□□□□ -0.6
SDF2-207ENST00000588472 DICER1Q9UPY3 1922 aaKnown RBP11.29□□□□□ -0.6
SDF2-207ENST00000588472 POTECB2RU33 542 aa11.28□□□□□ -0.6
SDF2-207ENST00000588472 E9PSI1 815 aa11.28□□□□□ -0.6
SDF2-207ENST00000588472 C6orf229H3BNL8 230 aa11.28□□□□□ -0.6
SDF2-207ENST00000588472 EIF6P56537 245 aaKnown RBP11.28□□□□□ -0.6
SDF2-207ENST00000588472 RPS8P62241 208 aaKnown RBP11.28□□□□□ -0.6
SDF2-207ENST00000588472 CCDC152Q4G0S7 254 aa11.28□□□□□ -0.6
SDF2-207ENST00000588472 SLC4A10Q6U841 1118 aa11.28□□□□□ -0.6
SDF2-207ENST00000588472 NIM1KQ8IY84 436 aa11.28□□□□□ -0.6
SDF2-207ENST00000588472 MKRN1Q9UHC7 482 aaKnown RBP11.28□□□□□ -0.6
SDF2-207ENST00000588472 PCNTO95613 3336 aa11.27□□□□□ -0.6
SDF2-207ENST00000588472 FZD9O00144 591 aa11.27□□□□□ -0.61
SDF2-207ENST00000588472 RIMBP2O15034 1052 aa11.27□□□□□ -0.61
SDF2-207ENST00000588472 GCKRQ14397 625 aa11.27□□□□□ -0.61
SDF2-207ENST00000588472 EAPPQ56P03 285 aaPredicted RBP11.27□□□□□ -0.61
SDF2-207ENST00000588472 SUPT20HQ8NEM7 779 aa11.27□□□□□ -0.61
SDF2-207ENST00000588472 SNED1Q8TER0 1413 aa11.26□□□□□ -0.61
SDF2-207ENST00000588472 CTSWP56202 376 aa11.26□□□□□ -0.61
SDF2-207ENST00000588472 GPSM2P81274 684 aa11.26□□□□□ -0.61
SDF2-207ENST00000588472 SLFN5Q08AF3 891 aa11.26□□□□□ -0.61
SDF2-207ENST00000588472 CHADLQ6NUI6 762 aa11.26□□□□□ -0.61
SDF2-207ENST00000588472 TMC4Q7Z404 712 aa11.26□□□□□ -0.61
SDF2-207ENST00000588472 AIDAQ96BJ3 306 aa11.26□□□□□ -0.61
SDF2-207ENST00000588472 GPR101Q96P66 508 aaPredicted RBP11.26□□□□□ -0.61
SDF2-207ENST00000588472 BCL2L13Q9BXK5 485 aa11.26□□□□□ -0.61
SDF2-207ENST00000588472 PRDM10Q9NQV6 1147 aa11.26□□□□□ -0.61
SDF2-207ENST00000588472 CLEC11AQ9Y240 323 aa11.26□□□□□ -0.61
SDF2-207ENST00000588472 COL4A1P02462 1669 aa11.25□□□□□ -0.61
SDF2-207ENST00000588472 COL4A5P29400 1685 aa11.25□□□□□ -0.61
SDF2-207ENST00000588472 IQCA1LA6NCM1 817 aa11.25□□□□□ -0.61
SDF2-207ENST00000588472 H7C1W4 665 aa11.25□□□□□ -0.61
SDF2-207ENST00000588472 FOXN1O15353 648 aa11.25□□□□□ -0.61
SDF2-207ENST00000588472 RAD17O75943 681 aa11.25□□□□□ -0.61
SDF2-207ENST00000588472 POTEIP0CG38 1075 aa11.25□□□□□ -0.61
SDF2-207ENST00000588472 POTEJP0CG39 1038 aa11.25□□□□□ -0.61
SDF2-207ENST00000588472 ANKRD18AQ8IVF6 992 aa11.25□□□□□ -0.61
SDF2-207ENST00000588472 LINS1Q8NG48 757 aa11.25□□□□□ -0.61
SDF2-207ENST00000588472 GREM2Q9H772 168 aa11.25□□□□□ -0.61
SDF2-207ENST00000588472 ANKIB1Q9P2G1 1089 aa11.25□□□□□ -0.61
SDF2-207ENST00000588472 CDHR2Q9BYE9 1310 aa11.25□□□□□ -0.61
SDF2-207ENST00000588472 G3V3G9 751 aa11.24□□□□□ -0.61
SDF2-207ENST00000588472 CTCFP49711 727 aaPredicted RBP11.24□□□□□ -0.61
SDF2-207ENST00000588472 DOK7Q18PE1 504 aa11.24□□□□□ -0.61
SDF2-207ENST00000588472 WASHC4Q2M389 1173 aa11.24□□□□□ -0.61
SDF2-207ENST00000588472 DCAF8Q5TAQ9 597 aa11.24□□□□□ -0.61
SDF2-207ENST00000588472 GPC2Q8N158 579 aa11.24□□□□□ -0.61
SDF2-207ENST00000588472 TTLL11Q8NHH1 800 aa11.24□□□□□ -0.61
SDF2-207ENST00000588472 RTFDC1Q9BY42 306 aaPredicted RBP11.24□□□□□ -0.61
SDF2-207ENST00000588472 TAF1DQ9H5J8 278 aaPredicted RBP11.24□□□□□ -0.61
SDF2-207ENST00000588472 POLLQ9UGP5 575 aa11.24□□□□□ -0.61
SDF2-207ENST00000588472 HACL1Q9UJ83 578 aa11.24□□□□□ -0.61
SDF2-207ENST00000588472 ZNRF3Q9ULT6 936 aa11.24□□□□□ -0.61
SDF2-207ENST00000588472 CHMP3Q9Y3E7 222 aa11.24□□□□□ -0.61
SDF2-207ENST00000588472 CNTNAP1P78357 1384 aa11.24□□□□□ -0.61
SDF2-207ENST00000588472 UFL1O94874 794 aa11.23□□□□□ -0.61
SDF2-207ENST00000588472 LMOD1P29536 600 aaPredicted RBP11.23□□□□□ -0.61
SDF2-207ENST00000588472 EPHX2P34913 555 aa11.23□□□□□ -0.61
SDF2-207ENST00000588472 CXCL9Q07325 125 aa11.23□□□□□ -0.61
SDF2-207ENST00000588472 KIAA2012Q0VF49 1180 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms