RNA–Protein interactions for RNA: ENST00000587537.5

CLPTM1-207, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 737 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-207ENST00000587537 ERC1Q8IUD2 1116 aa12.85□□□□□ -0.35
CLPTM1-207ENST00000587537 TTLL11Q8NHH1 800 aa12.85□□□□□ -0.35
CLPTM1-207ENST00000587537 KAZALD1Q96I82 304 aa12.85□□□□□ -0.35
CLPTM1-207ENST00000587537 CDC5LQ99459 802 aaKnown RBP12.85□□□□□ -0.35
CLPTM1-207ENST00000587537 C1orf115Q9H7X2 142 aa12.85□□□□□ -0.35
CLPTM1-207ENST00000587537 ANKRD18BA2A2Z9 1011 aa12.84□□□□□ -0.35
CLPTM1-207ENST00000587537 FAM177BA6PVY3 158 aa12.84□□□□□ -0.35
CLPTM1-207ENST00000587537 RAB11FIP3O75154 756 aa12.84□□□□□ -0.35
CLPTM1-207ENST00000587537 TMC4Q7Z404 712 aa12.84□□□□□ -0.35
CLPTM1-207ENST00000587537 DCTPP1Q9H773 170 aa12.84□□□□□ -0.35
CLPTM1-207ENST00000587537 COPRSQ9NQ92 184 aa12.84□□□□□ -0.35
CLPTM1-207ENST00000587537 ZBTB47Q9UFB7 747 aaPredicted RBP12.84□□□□□ -0.35
CLPTM1-207ENST00000587537 NOP58Q9Y2X3 529 aaKnown RBP12.84□□□□□ -0.35
CLPTM1-207ENST00000587537 SOCS7O14512 581 aa12.83□□□□□ -0.36
CLPTM1-207ENST00000587537 CIAO1O76071 339 aa12.83□□□□□ -0.36
CLPTM1-207ENST00000587537 CRY2Q49AN0 593 aa12.83□□□□□ -0.36
CLPTM1-207ENST00000587537 RTL5Q5HYW3 569 aaPredicted RBP12.83□□□□□ -0.36
CLPTM1-207ENST00000587537 NUTM1Q86Y26 1132 aa12.83□□□□□ -0.36
CLPTM1-207ENST00000587537 SMC5Q8IY18 1101 aa12.83□□□□□ -0.36
CLPTM1-207ENST00000587537 ABCC12Q96J65 1359 aa12.82□□□□□ -0.36
CLPTM1-207ENST00000587537 C10orf71Q711Q0 1435 aa12.82□□□□□ -0.36
CLPTM1-207ENST00000587537 HCLS1P14317 486 aaPredicted RBP12.82□□□□□ -0.36
CLPTM1-207ENST00000587537 TAF7LQ5H9L4 462 aa12.82□□□□□ -0.36
CLPTM1-207ENST00000587537 EPHA10Q5JZY3 1008 aa12.82□□□□□ -0.36
CLPTM1-207ENST00000587537 DDX46Q7L014 1031 aaKnown RBP12.82□□□□□ -0.36
CLPTM1-207ENST00000587537 SIRT2Q8IXJ6 389 aa12.82□□□□□ -0.36
CLPTM1-207ENST00000587537 RPGRQ92834 1020 aaKnown RBP12.82□□□□□ -0.36
CLPTM1-207ENST00000587537 CHMP3Q9Y3E7 222 aa12.82□□□□□ -0.36
CLPTM1-207ENST00000587537 KIF13BQ9NQT8 1826 aa12.82□□□□□ -0.36
CLPTM1-207ENST00000587537 KDM2BQ8NHM5 1336 aa12.82□□□□□ -0.36
CLPTM1-207ENST00000587537 PNMA6EA0A0J9YXQ4 647 aa12.81□□□□□ -0.36
CLPTM1-207ENST00000587537 ITGA6P23229 1130 aa12.81□□□□□ -0.36
CLPTM1-207ENST00000587537 ALDH1B1P30837 517 aa12.81□□□□□ -0.36
CLPTM1-207ENST00000587537 HOXA10P31260 410 aaPredicted RBP12.81□□□□□ -0.36
CLPTM1-207ENST00000587537 IGHMBP2P38935 993 aaKnown RBP12.81□□□□□ -0.36
CLPTM1-207ENST00000587537 G3BP1Q13283 466 aaKnown RBP eCLIP12.81□□□□□ -0.36
CLPTM1-207ENST00000587537 MSL1Q68DK7 614 aa12.81□□□□□ -0.36
CLPTM1-207ENST00000587537 RBM17Q96I25 401 aaKnown RBP12.81□□□□□ -0.36
CLPTM1-207ENST00000587537 SURF6O75683 361 aaKnown RBP12.8□□□□□ -0.36
CLPTM1-207ENST00000587537 NPR1P16066 1061 aa12.8□□□□□ -0.36
CLPTM1-207ENST00000587537 IL15P40933 162 aaPredicted RBP12.8□□□□□ -0.36
CLPTM1-207ENST00000587537 PTPN12Q05209 780 aaKnown RBP12.8□□□□□ -0.36
CLPTM1-207ENST00000587537 FAM161AQ3B820 660 aa12.8□□□□□ -0.36
CLPTM1-207ENST00000587537 SYNE4Q8N205 404 aa12.8□□□□□ -0.36
CLPTM1-207ENST00000587537 JARID2Q92833 1246 aaPredicted RBP12.8□□□□□ -0.36
CLPTM1-207ENST00000587537 KIF1BPQ96EK5 621 aa12.8□□□□□ -0.36
CLPTM1-207ENST00000587537 CRAMP1Q96RY5 1269 aa12.8□□□□□ -0.36
CLPTM1-207ENST00000587537 MPHOSPH8Q99549 860 aa12.8□□□□□ -0.36
CLPTM1-207ENST00000587537 GREM2Q9H772 168 aa12.8□□□□□ -0.36
CLPTM1-207ENST00000587537 SPON1Q9HCB6 807 aa12.8□□□□□ -0.36
CLPTM1-207ENST00000587537 ANKRD31Q8N7Z5 1873 aa12.8□□□□□ -0.36
CLPTM1-207ENST00000587537 LRP5O75197 1615 aa12.8□□□□□ -0.36
CLPTM1-207ENST00000587537 H0YIN7 160 aa12.79□□□□□ -0.36
CLPTM1-207ENST00000587537 BBOX1O75936 387 aa12.79□□□□□ -0.36
CLPTM1-207ENST00000587537 RFX5P48382 616 aaPredicted RBP12.79□□□□□ -0.36
CLPTM1-207ENST00000587537 TGFB2P61812 414 aa12.79□□□□□ -0.36
CLPTM1-207ENST00000587537 OS9Q13438 667 aaPredicted RBP12.79□□□□□ -0.36
CLPTM1-207ENST00000587537 STYK1Q6J9G0 422 aa12.79□□□□□ -0.36
CLPTM1-207ENST00000587537 ANKRD18AQ8IVF6 992 aa12.79□□□□□ -0.36
CLPTM1-207ENST00000587537 MASTLQ96GX5 879 aa12.79□□□□□ -0.36
CLPTM1-207ENST00000587537 CD2APQ9Y5K6 639 aa12.79□□□□□ -0.36
CLPTM1-207ENST00000587537 MROH5Q6ZUA9 1318 aa12.79□□□□□ -0.36
CLPTM1-207ENST00000587537 TNRC6CQ9HCJ0 1690 aaKnown RBP12.79□□□□□ -0.36
CLPTM1-207ENST00000587537 EYA2O00167 538 aa12.78□□□□□ -0.36
CLPTM1-207ENST00000587537 ZBTB7AO95365 584 aa12.78□□□□□ -0.36
CLPTM1-207ENST00000587537 IGHDP01880 384 aa12.78□□□□□ -0.36
CLPTM1-207ENST00000587537 GRAPQ13588 217 aa12.78□□□□□ -0.36
CLPTM1-207ENST00000587537 GRIPAP1Q4V328 841 aa12.78□□□□□ -0.36
CLPTM1-207ENST00000587537 B4GALNT3Q6L9W6 998 aa12.78□□□□□ -0.36
CLPTM1-207ENST00000587537 LDHAL6AQ6ZMR3 332 aa12.78□□□□□ -0.36
CLPTM1-207ENST00000587537 GRAPLQ8TC17 118 aaPredicted RBP12.78□□□□□ -0.36
CLPTM1-207ENST00000587537 CNKSR2Q8WXI2 1034 aa12.78□□□□□ -0.36
CLPTM1-207ENST00000587537 SGIP1Q9BQI5 828 aa12.78□□□□□ -0.36
CLPTM1-207ENST00000587537 LRRCC1Q9C099 1032 aa12.78□□□□□ -0.36
CLPTM1-207ENST00000587537 TMX4Q9H1E5 349 aaPredicted RBP12.78□□□□□ -0.36
CLPTM1-207ENST00000587537 GPR108Q9NPR9 543 aa12.78□□□□□ -0.36
CLPTM1-207ENST00000587537 BSDC1Q9NW68 430 aaPredicted RBP12.78□□□□□ -0.36
CLPTM1-207ENST00000587537 DLEC1Q9Y238 1755 aa12.78□□□□□ -0.36
CLPTM1-207ENST00000587537 SRGNP10124 158 aa12.77□□□□□ -0.37
CLPTM1-207ENST00000587537 RPS8P62241 208 aaKnown RBP12.77□□□□□ -0.37
CLPTM1-207ENST00000587537 CNKSR1Q969H4 720 aa12.77□□□□□ -0.37
CLPTM1-207ENST00000587537 PDGFDQ9GZP0 370 aaPredicted RBP12.77□□□□□ -0.37
CLPTM1-207ENST00000587537 AKAP2Q9Y2D5 859 aa12.77□□□□□ -0.37
CLPTM1-207ENST00000587537 PSDA5PKW4 1024 aaPredicted RBP12.76□□□□□ -0.37
CLPTM1-207ENST00000587537 NUCB1Q02818 461 aa12.76□□□□□ -0.37
CLPTM1-207ENST00000587537 CC2D2BQ6DHV5 1058 aa12.76□□□□□ -0.37
CLPTM1-207ENST00000587537 CLASRPQ8N2M8 674 aaKnown RBP12.76□□□□□ -0.37
CLPTM1-207ENST00000587537 ANKRD2Q9GZV1 360 aa12.76□□□□□ -0.37
CLPTM1-207ENST00000587537 CNNM1Q9NRU3 951 aa12.76□□□□□ -0.37
CLPTM1-207ENST00000587537 CEP126Q9P2H0 1117 aa12.76□□□□□ -0.37
CLPTM1-207ENST00000587537 PTGER2P43116 358 aa12.75□□□□□ -0.37
CLPTM1-207ENST00000587537 CHD1LQ86WJ1 897 aa12.75□□□□□ -0.37
CLPTM1-207ENST00000587537 RHPN1Q8TCX5 695 aa12.75□□□□□ -0.37
CLPTM1-207ENST00000587537 ATF5Q9Y2D1 282 aaPredicted RBP12.75□□□□□ -0.37
CLPTM1-207ENST00000587537 EXOC6BQ9Y2D4 811 aa12.75□□□□□ -0.37
CLPTM1-207ENST00000587537 RIPOR2Q9Y4F9 1068 aa12.75□□□□□ -0.37
CLPTM1-207ENST00000587537 SOGA3Q5TF21 947 aa12.74□□□□□ -0.37
CLPTM1-207ENST00000587537 ANKRD45Q5TZF3 282 aa12.74□□□□□ -0.37
CLPTM1-207ENST00000587537 C2CD5Q86YS7 1000 aa12.74□□□□□ -0.37
CLPTM1-207ENST00000587537 GPATCH3Q96I76 525 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms