RNA–Protein interactions for RNA: ENST00000587451.2

CACNA1A-208, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 1 (best)

Gene CACNA1A, Length 673 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-208ENST00000587451 SUV39H2Q9H5I1 410 aa8.78□□□□□ -1
CACNA1A-208ENST00000587451 SASH3O75995 380 aa8.77□□□□□ -1.01
CACNA1A-208ENST00000587451 COL8A1P27658 744 aa8.77□□□□□ -1.01
CACNA1A-208ENST00000587451 DHX32Q7L7V1 743 aaKnown RBP8.77□□□□□ -1.01
CACNA1A-208ENST00000587451 FNDC3AQ9Y2H6 1198 aaKnown RBP8.77□□□□□ -1.01
CACNA1A-208ENST00000587451 MSTNO14793 375 aa8.76□□□□□ -1.01
CACNA1A-208ENST00000587451 GRNP28799 593 aaKnown RBP8.76□□□□□ -1.01
CACNA1A-208ENST00000587451 B4GALNT3Q6L9W6 998 aa8.76□□□□□ -1.01
CACNA1A-208ENST00000587451 JPH1Q9HDC5 661 aaPredicted RBP8.76□□□□□ -1.01
CACNA1A-208ENST00000587451 STARD13Q9Y3M8 1113 aa8.76□□□□□ -1.01
CACNA1A-208ENST00000587451 TMEM88BA6NKF7 163 aa8.75□□□□□ -1.01
CACNA1A-208ENST00000587451 TNFRSF10BO14763 440 aa8.75□□□□□ -1.01
CACNA1A-208ENST00000587451 PSAPP07602 524 aa8.75□□□□□ -1.01
CACNA1A-208ENST00000587451 SPATA31C1P0DKV0 1188 aa8.75□□□□□ -1.01
CACNA1A-208ENST00000587451 TARSP26639 723 aaKnown RBP8.75□□□□□ -1.01
CACNA1A-208ENST00000587451 ZAP70P43403 619 aa8.75□□□□□ -1.01
CACNA1A-208ENST00000587451 CAPN12Q6ZSI9 719 aa8.75□□□□□ -1.01
CACNA1A-208ENST00000587451 FAM35AQ86V20 835 aa8.75□□□□□ -1.01
CACNA1A-208ENST00000587451 TRIM11Q96F44 468 aa8.75□□□□□ -1.01
CACNA1A-208ENST00000587451 SLAIN2Q9P270 581 aa8.75□□□□□ -1.01
CACNA1A-208ENST00000587451 USTQ9Y2C2 406 aa8.75□□□□□ -1.01
CACNA1A-208ENST00000587451 USP20Q9Y2K6 914 aa8.75□□□□□ -1.01
CACNA1A-208ENST00000587451 RGS9O75916 674 aaPredicted RBP8.74□□□□□ -1.01
CACNA1A-208ENST00000587451 GPLD1P80108 840 aa8.74□□□□□ -1.01
CACNA1A-208ENST00000587451 PLAURQ03405 335 aa8.74□□□□□ -1.01
CACNA1A-208ENST00000587451 PSAPL1Q6NUJ1 521 aa8.74□□□□□ -1.01
CACNA1A-208ENST00000587451 TRPM4Q8TD43 1214 aa8.74□□□□□ -1.01
CACNA1A-208ENST00000587451 ZFATQ9P243 1243 aa8.74□□□□□ -1.01
CACNA1A-208ENST00000587451 KRBA1A5PL33 1030 aa8.73□□□□□ -1.01
CACNA1A-208ENST00000587451 UBAP1LF5GYI3 381 aa8.73□□□□□ -1.01
CACNA1A-208ENST00000587451 PCSK2P16519 638 aa8.73□□□□□ -1.01
CACNA1A-208ENST00000587451 SSFA2P28290 1259 aa8.73□□□□□ -1.01
CACNA1A-208ENST00000587451 NRLP54845 237 aa8.73□□□□□ -1.01
CACNA1A-208ENST00000587451 TRIM28Q13263 835 aaKnown RBP8.73□□□□□ -1.01
CACNA1A-208ENST00000587451 C20orf204Q6ZNR8 217 aa8.73□□□□□ -1.01
CACNA1A-208ENST00000587451 NLRP13Q86W25 1043 aa8.73□□□□□ -1.01
CACNA1A-208ENST00000587451 HELQQ8TDG4 1101 aa8.73□□□□□ -1.01
CACNA1A-208ENST00000587451 RBSNQ9H1K0 784 aa8.73□□□□□ -1.01
CACNA1A-208ENST00000587451 TLR7Q9NYK1 1049 aaKnown RBP8.73□□□□□ -1.01
CACNA1A-208ENST00000587451 FRRS1LQ9P0K9 344 aa8.73□□□□□ -1.01
CACNA1A-208ENST00000587451 SEPT3Q9UH03 358 aa8.73□□□□□ -1.01
CACNA1A-208ENST00000587451 KCNMB2Q9Y691 235 aa8.73□□□□□ -1.01
CACNA1A-208ENST00000587451 APBA3O96018 575 aa8.72□□□□□ -1.01
CACNA1A-208ENST00000587451 RPLP1P05386 114 aaKnown RBP8.72□□□□□ -1.01
CACNA1A-208ENST00000587451 CPB1P15086 417 aa8.72□□□□□ -1.01
CACNA1A-208ENST00000587451 ELMSAN1Q6PJG2 1045 aa8.72□□□□□ -1.01
CACNA1A-208ENST00000587451 TTC16Q8NEE8 873 aa8.72□□□□□ -1.01
CACNA1A-208ENST00000587451 NUDT8Q8WV74 236 aa8.72□□□□□ -1.01
CACNA1A-208ENST00000587451 ARID3AQ99856 593 aa8.72□□□□□ -1.01
CACNA1A-208ENST00000587451 SUPT5HO00267 1087 aaKnown RBP8.71□□□□□ -1.02
CACNA1A-208ENST00000587451 SOX18P35713 384 aa8.71□□□□□ -1.02
CACNA1A-208ENST00000587451 RAC1P63000 192 aa8.71□□□□□ -1.02
CACNA1A-208ENST00000587451 PDE4CQ08493 712 aa8.71□□□□□ -1.02
CACNA1A-208ENST00000587451 TRAPPC3LQ5T215 181 aa8.71□□□□□ -1.02
CACNA1A-208ENST00000587451 C8orf86Q6ZUL3 223 aa8.71□□□□□ -1.02
CACNA1A-208ENST00000587451 GPR152Q8TDT2 470 aa8.71□□□□□ -1.02
CACNA1A-208ENST00000587451 NACC1Q96RE7 527 aa8.71□□□□□ -1.02
CACNA1A-208ENST00000587451 NAGPAQ9UK23 515 aa8.71□□□□□ -1.02
CACNA1A-208ENST00000587451 GHRHP01286 108 aa8.7□□□□□ -1.02
CACNA1A-208ENST00000587451 NID1P14543 1247 aa8.7□□□□□ -1.02
CACNA1A-208ENST00000587451 EIF2AK2P19525 551 aaKnown RBP8.7□□□□□ -1.02
CACNA1A-208ENST00000587451 ALKBH2Q6NS38 261 aa8.7□□□□□ -1.02
CACNA1A-208ENST00000587451 SPOCK3Q9BQ16 436 aa8.7□□□□□ -1.02
CACNA1A-208ENST00000587451 MMP20O60882 483 aa8.69□□□□□ -1.02
CACNA1A-208ENST00000587451 MLLT1Q03111 559 aaPredicted RBP8.69□□□□□ -1.02
CACNA1A-208ENST00000587451 TRIP4Q15650 581 aaPredicted RBP8.69□□□□□ -1.02
CACNA1A-208ENST00000587451 TTC39BQ5VTQ0 682 aaPredicted RBP8.69□□□□□ -1.02
CACNA1A-208ENST00000587451 GTF3C2Q8WUA4 911 aaPredicted RBP8.69□□□□□ -1.02
CACNA1A-208ENST00000587451 AFF1P51825 1210 aaKnown RBP8.68□□□□□ -1.02
CACNA1A-208ENST00000587451 COL9A3Q14050 684 aaPredicted RBP8.68□□□□□ -1.02
CACNA1A-208ENST00000587451 NOM1Q5C9Z4 860 aaKnown RBP8.68□□□□□ -1.02
CACNA1A-208ENST00000587451 PERM1Q5SV97 790 aa8.68□□□□□ -1.02
CACNA1A-208ENST00000587451 LOC102724428A0A0B4J2F2 783 aa8.67□□□□□ -1.02
CACNA1A-208ENST00000587451 C1QTNF9BB2RNN3 333 aa8.67□□□□□ -1.02
CACNA1A-208ENST00000587451 ZBTB42B2RXF5 422 aa8.67□□□□□ -1.02
CACNA1A-208ENST00000587451 HOXD8P13378 290 aaPredicted RBP8.67□□□□□ -1.02
CACNA1A-208ENST00000587451 SIK1P57059 783 aa8.67□□□□□ -1.02
CACNA1A-208ENST00000587451 FAM26DQ5JW98 314 aa8.67□□□□□ -1.02
CACNA1A-208ENST00000587451 TTC9Q92623 222 aa8.67□□□□□ -1.02
CACNA1A-208ENST00000587451 SPACA7Q96KW9 195 aa8.67□□□□□ -1.02
CACNA1A-208ENST00000587451 NSUN5Q96P11 429 aaKnown RBP8.67□□□□□ -1.02
CACNA1A-208ENST00000587451 LPIN3Q9BQK8 851 aa8.67□□□□□ -1.02
CACNA1A-208ENST00000587451 TIMELESSQ9UNS1 1208 aa8.67□□□□□ -1.02
CACNA1A-208ENST00000587451 ZBTB39O15060 712 aa8.66□□□□□ -1.02
CACNA1A-208ENST00000587451 SF3B2Q13435 895 aaKnown RBP8.66□□□□□ -1.02
CACNA1A-208ENST00000587451 AAMPQ13685 434 aa8.66□□□□□ -1.02
CACNA1A-208ENST00000587451 PDE12Q6L8Q7 609 aaKnown RBP8.66□□□□□ -1.02
CACNA1A-208ENST00000587451 HFE2Q6ZVN8 426 aa8.66□□□□□ -1.02
CACNA1A-208ENST00000587451 CD163Q86VB7 1156 aa8.66□□□□□ -1.02
CACNA1A-208ENST00000587451 WFDC8Q8IUA0 241 aa8.66□□□□□ -1.02
CACNA1A-208ENST00000587451 NUDT16Q96DE0 195 aaKnown RBP8.66□□□□□ -1.02
CACNA1A-208ENST00000587451 SMG9Q9H0W8 520 aaKnown RBP8.66□□□□□ -1.02
CACNA1A-208ENST00000587451 FAM13AO94988 1023 aa8.65□□□□□ -1.02
CACNA1A-208ENST00000587451 PROCP04070 461 aa8.65□□□□□ -1.02
CACNA1A-208ENST00000587451 ELNP15502 786 aa8.65□□□□□ -1.02
CACNA1A-208ENST00000587451 MSL1Q68DK7 614 aa8.65□□□□□ -1.02
CACNA1A-208ENST00000587451 DTWD1Q8N5C7 304 aa8.65□□□□□ -1.02
CACNA1A-208ENST00000587451 OR13H1Q8NG92 308 aa8.65□□□□□ -1.02
CACNA1A-208ENST00000587451 ABI2Q9NYB9 513 aaPredicted RBP8.65□□□□□ -1.02
CACNA1A-208ENST00000587451 A0A0A0MRY4 1105 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms