RNA–Protein interactions for RNA: ENST00000587260.1

NFIX-208, Transcript of nuclear factor I X, humanhuman

TSL 1 (best) BASIC

Gene NFIX, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-208ENST00000587260 CTSWP56202 376 aa18.61■□□□□ 0.57
NFIX-208ENST00000587260 KIF13BQ9NQT8 1826 aa18.61■□□□□ 0.57
NFIX-208ENST00000587260 TAF1P21675 1872 aa18.61■□□□□ 0.57
NFIX-208ENST00000587260 RIC1Q4ADV7 1423 aa18.6■□□□□ 0.57
NFIX-208ENST00000587260 LMBR1LQ6UX01 489 aa18.6■□□□□ 0.57
NFIX-208ENST00000587260 PLA2G12BQ9BX93 195 aa18.6■□□□□ 0.57
NFIX-208ENST00000587260 CACNA1SQ13698 1873 aa18.6■□□□□ 0.57
NFIX-208ENST00000587260 C10orf71Q711Q0 1435 aa18.6■□□□□ 0.57
NFIX-208ENST00000587260 HMMRO75330 724 aa18.59■□□□□ 0.57
NFIX-208ENST00000587260 SMC5Q8IY18 1101 aa18.59■□□□□ 0.57
NFIX-208ENST00000587260 COL4A1P02462 1669 aa18.59■□□□□ 0.57
NFIX-208ENST00000587260 PNMA6EA0A0J9YXQ4 647 aa18.59■□□□□ 0.57
NFIX-208ENST00000587260 HSP90B1P14625 803 aaKnown RBP18.59■□□□□ 0.57
NFIX-208ENST00000587260 FAM161AQ3B820 660 aa18.59■□□□□ 0.57
NFIX-208ENST00000587260 RABL6Q3YEC7 729 aaPredicted RBP18.59■□□□□ 0.57
NFIX-208ENST00000587260 SLC10A5Q5PT55 438 aa18.59■□□□□ 0.57
NFIX-208ENST00000587260 SRGAP3O43295 1099 aa18.58■□□□□ 0.56
NFIX-208ENST00000587260 PTGER2P43116 358 aa18.58■□□□□ 0.56
NFIX-208ENST00000587260 POLA2Q14181 598 aa18.58■□□□□ 0.56
NFIX-208ENST00000587260 TTLL11Q8NHH1 800 aa18.58■□□□□ 0.56
NFIX-208ENST00000587260 SSH3Q8TE77 659 aa18.58■□□□□ 0.56
NFIX-208ENST00000587260 NLRP3Q96P20 1036 aa18.58■□□□□ 0.56
NFIX-208ENST00000587260 SGIP1Q9BQI5 828 aa18.58■□□□□ 0.56
NFIX-208ENST00000587260 GREM2Q9H772 168 aa18.58■□□□□ 0.56
NFIX-208ENST00000587260 DLEC1Q9Y238 1755 aa18.57■□□□□ 0.56
NFIX-208ENST00000587260 GCC1Q96CN9 775 aa18.57■□□□□ 0.56
NFIX-208ENST00000587260 DCTPP1Q9H773 170 aa18.57■□□□□ 0.56
NFIX-208ENST00000587260 SPON1Q9HCB6 807 aa18.57■□□□□ 0.56
NFIX-208ENST00000587260 KIAA1551Q9HCM1 1747 aa18.56■□□□□ 0.56
NFIX-208ENST00000587260 KLHL34Q8N239 644 aa18.56■□□□□ 0.56
NFIX-208ENST00000587260 BRIP1Q9BX63 1249 aa18.56■□□□□ 0.56
NFIX-208ENST00000587260 CSF1RP07333 972 aa18.55■□□□□ 0.56
NFIX-208ENST00000587260 CCDC152Q4G0S7 254 aa18.55■□□□□ 0.56
NFIX-208ENST00000587260 LRP5O75197 1615 aa18.55■□□□□ 0.56
NFIX-208ENST00000587260 KLHDC4Q8TBB5 520 aa18.54■□□□□ 0.56
NFIX-208ENST00000587260 ITGA6P23229 1130 aa18.54■□□□□ 0.56
NFIX-208ENST00000587260 SF3B3Q15393 1217 aaKnown RBP18.54■□□□□ 0.56
NFIX-208ENST00000587260 CCDC57Q2TAC2 916 aa18.54■□□□□ 0.56
NFIX-208ENST00000587260 SEC31BQ9NQW1 1179 aa18.54■□□□□ 0.56
NFIX-208ENST00000587260 PPP1R1BQ9UD71 204 aaPredicted RBP18.54■□□□□ 0.56
NFIX-208ENST00000587260 PDE6BP35913 854 aa18.53■□□□□ 0.56
NFIX-208ENST00000587260 IFIT5Q13325 482 aaKnown RBP18.53■□□□□ 0.56
NFIX-208ENST00000587260 RPGRQ92834 1020 aaKnown RBP18.53■□□□□ 0.56
NFIX-208ENST00000587260 ZNF594Q96JF6 807 aaPredicted RBP18.53■□□□□ 0.56
NFIX-208ENST00000587260 PA2G4Q9UQ80 394 aaKnown RBP18.53■□□□□ 0.56
NFIX-208ENST00000587260 RTL9Q8NET4 1388 aa18.52■□□□□ 0.56
NFIX-208ENST00000587260 ANKRD18BA2A2Z9 1011 aa18.52■□□□□ 0.56
NFIX-208ENST00000587260 RFX5P48382 616 aaPredicted RBP18.52■□□□□ 0.56
NFIX-208ENST00000587260 CRY2Q49AN0 593 aa18.52■□□□□ 0.56
NFIX-208ENST00000587260 TAF7LQ5H9L4 462 aa18.52■□□□□ 0.56
NFIX-208ENST00000587260 C2CD5Q86YS7 1000 aa18.52■□□□□ 0.56
NFIX-208ENST00000587260 A0A1B0GUL6 1792 aa18.52■□□□□ 0.55
NFIX-208ENST00000587260 CHRNA5P30532 468 aa18.51■□□□□ 0.55
NFIX-208ENST00000587260 SIL1Q9H173 461 aa18.51■□□□□ 0.55
NFIX-208ENST00000587260 NOP58Q9Y2X3 529 aaKnown RBP18.51■□□□□ 0.55
NFIX-208ENST00000587260 DDX46Q7L014 1031 aaKnown RBP18.5■□□□□ 0.55
NFIX-208ENST00000587260 KLRG2A4D1S0 409 aaPredicted RBP18.49■□□□□ 0.55
NFIX-208ENST00000587260 SRGNP10124 158 aa18.49■□□□□ 0.55
NFIX-208ENST00000587260 NUCB1Q02818 461 aa18.49■□□□□ 0.55
NFIX-208ENST00000587260 PTPN12Q05209 780 aaKnown RBP18.49■□□□□ 0.55
NFIX-208ENST00000587260 CELF1Q92879 486 aaKnown RBP18.49■□□□□ 0.55
NFIX-208ENST00000587260 EXOC6BQ9Y2D4 811 aa18.49■□□□□ 0.55
NFIX-208ENST00000587260 BRCA1P38398 1863 aaKnown RBP18.49■□□□□ 0.55
NFIX-208ENST00000587260 H0YIN7 160 aa18.49■□□□□ 0.55
NFIX-208ENST00000587260 RBM17Q96I25 401 aaKnown RBP18.49■□□□□ 0.55
NFIX-208ENST00000587260 CDC5LQ99459 802 aaKnown RBP18.49■□□□□ 0.55
NFIX-208ENST00000587260 COPRSQ9NQ92 184 aa18.49■□□□□ 0.55
NFIX-208ENST00000587260 PDZRN3Q9UPQ7 1066 aa18.49■□□□□ 0.55
NFIX-208ENST00000587260 APBB1O00213 710 aa18.48■□□□□ 0.55
NFIX-208ENST00000587260 SURF6O75683 361 aaKnown RBP18.48■□□□□ 0.55
NFIX-208ENST00000587260 ZNF622Q969S3 477 aaKnown RBP eCLIP18.48■□□□□ 0.55
NFIX-208ENST00000587260 LRRC37AA6NMS7 1700 aa18.47■□□□□ 0.55
NFIX-208ENST00000587260 RAB11FIP3O75154 756 aa18.47■□□□□ 0.55
NFIX-208ENST00000587260 NPR1P16066 1061 aa18.47■□□□□ 0.55
NFIX-208ENST00000587260 IGHMBP2P38935 993 aaKnown RBP18.47■□□□□ 0.55
NFIX-208ENST00000587260 OS9Q13438 667 aaPredicted RBP18.47■□□□□ 0.55
NFIX-208ENST00000587260 GRAPQ13588 217 aa18.47■□□□□ 0.55
NFIX-208ENST00000587260 HSP90AB4PQ58FF6 505 aa18.47■□□□□ 0.55
NFIX-208ENST00000587260 ANKRD18AQ8IVF6 992 aa18.47■□□□□ 0.55
NFIX-208ENST00000587260 GRAPLQ8TC17 118 aaPredicted RBP18.47■□□□□ 0.55
NFIX-208ENST00000587260 MASTLQ96GX5 879 aa18.47■□□□□ 0.55
NFIX-208ENST00000587260 A0A0G2JLW4 131 aa18.46■□□□□ 0.55
NFIX-208ENST00000587260 DPEP1P16444 411 aa18.46■□□□□ 0.55
NFIX-208ENST00000587260 HOXA10P31260 410 aaPredicted RBP18.46■□□□□ 0.55
NFIX-208ENST00000587260 LRRC24Q50LG9 513 aa18.46■□□□□ 0.55
NFIX-208ENST00000587260 SLC51AQ86UW1 340 aa18.46■□□□□ 0.55
NFIX-208ENST00000587260 CHD1LQ86WJ1 897 aa18.46■□□□□ 0.55
NFIX-208ENST00000587260 PUS3Q9BZE2 481 aaKnown RBP18.46■□□□□ 0.55
NFIX-208ENST00000587260 SLX4Q8IY92 1834 aa18.46■□□□□ 0.55
NFIX-208ENST00000587260 LDHAL6AQ6ZMR3 332 aa18.45■□□□□ 0.54
NFIX-208ENST00000587260 MPHOSPH8Q99549 860 aa18.45■□□□□ 0.54
NFIX-208ENST00000587260 BCL11AQ9H165 835 aa18.45■□□□□ 0.54
NFIX-208ENST00000587260 CNNM1Q9NRU3 951 aa18.45■□□□□ 0.54
NFIX-208ENST00000587260 WWC3Q9ULE0 1092 aa18.45■□□□□ 0.54
NFIX-208ENST00000587260 CD2APQ9Y5K6 639 aa18.45■□□□□ 0.54
NFIX-208ENST00000587260 ANKRD45Q5TZF3 282 aa18.44■□□□□ 0.54
NFIX-208ENST00000587260 STYK1Q6J9G0 422 aa18.44■□□□□ 0.54
NFIX-208ENST00000587260 CRAMP1Q96RY5 1269 aa18.44■□□□□ 0.54
NFIX-208ENST00000587260 EYA2O00167 538 aa18.44■□□□□ 0.54
NFIX-208ENST00000587260 RPS8P62241 208 aaKnown RBP18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms