RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 SHTN1A0MZ66 631 aa10.18□□□□□ -0.78
VMP1-204ENST00000587259 PPEF1O14829 653 aaPredicted RBP10.18□□□□□ -0.78
VMP1-204ENST00000587259 AOC2O75106 756 aa10.18□□□□□ -0.78
VMP1-204ENST00000587259 NTSR2O95665 410 aa10.18□□□□□ -0.78
VMP1-204ENST00000587259 EIF6P56537 245 aaKnown RBP10.18□□□□□ -0.78
VMP1-204ENST00000587259 PROSER3Q2NL68 480 aa10.18□□□□□ -0.78
VMP1-204ENST00000587259 CST9Q5W186 159 aa10.18□□□□□ -0.78
VMP1-204ENST00000587259 DLK2Q6UY11 383 aa10.18□□□□□ -0.78
VMP1-204ENST00000587259 PNMA8AQ86V59 439 aaPredicted RBP10.18□□□□□ -0.78
VMP1-204ENST00000587259 NECTIN2Q92692 538 aa10.18□□□□□ -0.78
VMP1-204ENST00000587259 ABHD8Q96I13 439 aa10.18□□□□□ -0.78
VMP1-204ENST00000587259 PSMD1Q99460 953 aa10.18□□□□□ -0.78
VMP1-204ENST00000587259 LAMB4A4D0S4 1761 aa10.18□□□□□ -0.78
VMP1-204ENST00000587259 NUP98P52948 1817 aa10.17□□□□□ -0.78
VMP1-204ENST00000587259 PPIP5K2O43314 1243 aa10.17□□□□□ -0.78
VMP1-204ENST00000587259 FAM161AQ3B820 660 aa10.17□□□□□ -0.78
VMP1-204ENST00000587259 KIF6Q6ZMV9 814 aa10.17□□□□□ -0.78
VMP1-204ENST00000587259 CAPNS2Q96L46 248 aa10.17□□□□□ -0.78
VMP1-204ENST00000587259 NYXQ9GZU5 481 aa10.17□□□□□ -0.78
VMP1-204ENST00000587259 DLG5Q8TDM6 1919 aa10.17□□□□□ -0.78
VMP1-204ENST00000587259 KDM3BQ7LBC6 1761 aa10.16□□□□□ -0.78
VMP1-204ENST00000587259 ERVV-1B6SEH8 477 aa10.16□□□□□ -0.78
VMP1-204ENST00000587259 HTATSF1O43719 755 aaKnown RBP10.16□□□□□ -0.78
VMP1-204ENST00000587259 HCLS1P14317 486 aaPredicted RBP10.16□□□□□ -0.78
VMP1-204ENST00000587259 EIF2S2P20042 333 aaKnown RBP10.16□□□□□ -0.78
VMP1-204ENST00000587259 LMOD1P29536 600 aaPredicted RBP10.16□□□□□ -0.78
VMP1-204ENST00000587259 HOXA10P31260 410 aaPredicted RBP10.16□□□□□ -0.78
VMP1-204ENST00000587259 ZNF34Q8IZ26 560 aa10.16□□□□□ -0.78
VMP1-204ENST00000587259 RBM17Q96I25 401 aaKnown RBP10.16□□□□□ -0.78
VMP1-204ENST00000587259 PLEKHF1Q96S99 279 aa10.16□□□□□ -0.78
VMP1-204ENST00000587259 ABCC4O15439 1325 aa10.15□□□□□ -0.78
VMP1-204ENST00000587259 GMPSP49915 693 aaPredicted RBP10.15□□□□□ -0.78
VMP1-204ENST00000587259 PDIA6Q15084 440 aa10.15□□□□□ -0.78
VMP1-204ENST00000587259 LRP10Q7Z4F1 713 aa10.15□□□□□ -0.78
VMP1-204ENST00000587259 NIM1KQ8IY84 436 aa10.15□□□□□ -0.78
VMP1-204ENST00000587259 GLIS2Q9BZE0 524 aaPredicted RBP10.15□□□□□ -0.78
VMP1-204ENST00000587259 ZNF408Q9H9D4 720 aa10.15□□□□□ -0.78
VMP1-204ENST00000587259 RIC1Q4ADV7 1423 aa10.15□□□□□ -0.79
VMP1-204ENST00000587259 CCDC85CA6NKD9 419 aa10.14□□□□□ -0.79
VMP1-204ENST00000587259 RGL2O15211 777 aa10.14□□□□□ -0.79
VMP1-204ENST00000587259 RAD17O75943 681 aa10.14□□□□□ -0.79
VMP1-204ENST00000587259 CELF2O95319 508 aaKnown RBP10.14□□□□□ -0.79
VMP1-204ENST00000587259 HIRAP54198 1017 aaPredicted RBP10.14□□□□□ -0.79
VMP1-204ENST00000587259 MAP2K1Q02750 393 aaPredicted RBP10.14□□□□□ -0.79
VMP1-204ENST00000587259 CXCL9Q07325 125 aa10.14□□□□□ -0.79
VMP1-204ENST00000587259 AIMP1Q12904 312 aaKnown RBP10.14□□□□□ -0.79
VMP1-204ENST00000587259 NFE2L2Q16236 605 aa10.14□□□□□ -0.79
VMP1-204ENST00000587259 KRT24Q2M2I5 525 aa10.14□□□□□ -0.79
VMP1-204ENST00000587259 GIGYF2Q6Y7W6 1299 aaKnown RBP10.14□□□□□ -0.79
VMP1-204ENST00000587259 TRPM4Q8TD43 1214 aa10.14□□□□□ -0.79
VMP1-204ENST00000587259 GPR101Q96P66 508 aaPredicted RBP10.14□□□□□ -0.79
VMP1-204ENST00000587259 CRAMP1Q96RY5 1269 aa10.14□□□□□ -0.79
VMP1-204ENST00000587259 ZIC5Q96T25 663 aa10.14□□□□□ -0.79
VMP1-204ENST00000587259 GPRC5DQ9NZD1 345 aa10.14□□□□□ -0.79
VMP1-204ENST00000587259 TSPYL4Q9UJ04 414 aa10.13□□□□□ -0.79
VMP1-204ENST00000587259 TLL2Q9Y6L7 1015 aa10.13□□□□□ -0.79
VMP1-204ENST00000587259 TAF1P21675 1872 aa10.13□□□□□ -0.79
VMP1-204ENST00000587259 COL4A1P02462 1669 aa10.12□□□□□ -0.79
VMP1-204ENST00000587259 YDJCA8MPS7 323 aa10.12□□□□□ -0.79
VMP1-204ENST00000587259 ERICH6BQ5W0A0 696 aa10.12□□□□□ -0.79
VMP1-204ENST00000587259 CC2D2BQ6DHV5 1058 aa10.12□□□□□ -0.79
VMP1-204ENST00000587259 USP50Q70EL3 339 aaPredicted RBP10.12□□□□□ -0.79
VMP1-204ENST00000587259 PPP1R42Q7Z4L9 355 aa10.12□□□□□ -0.79
VMP1-204ENST00000587259 RASEFQ8IZ41 740 aa10.12□□□□□ -0.79
VMP1-204ENST00000587259 NLRP3Q96P20 1036 aa10.12□□□□□ -0.79
VMP1-204ENST00000587259 UTP14AQ9BVJ6 771 aaKnown RBP10.12□□□□□ -0.79
VMP1-204ENST00000587259 PNNQ9H307 717 aaKnown RBP10.12□□□□□ -0.79
VMP1-204ENST00000587259 ATP6V0A2Q9Y487 856 aa10.12□□□□□ -0.79
VMP1-204ENST00000587259 THSD7BQ9C0I4 1608 aa10.11□□□□□ -0.79
VMP1-204ENST00000587259 EGFRP00533 1210 aa10.11□□□□□ -0.79
VMP1-204ENST00000587259 DPP8Q6V1X1 898 aaPredicted RBP10.11□□□□□ -0.79
VMP1-204ENST00000587259 COPS6Q7L5N1 327 aa10.11□□□□□ -0.79
VMP1-204ENST00000587259 SAPCD2Q86UD0 394 aa10.11□□□□□ -0.79
VMP1-204ENST00000587259 XAGE3Q8WTP9 111 aa10.11□□□□□ -0.79
VMP1-204ENST00000587259 MS4A3Q96HJ5 214 aa10.11□□□□□ -0.79
VMP1-204ENST00000587259 CFAP44Q96MT7 982 aa10.11□□□□□ -0.79
VMP1-204ENST00000587259 ADARB2Q9NS39 739 aaKnown RBP10.11□□□□□ -0.79
VMP1-204ENST00000587259 ZNRF3Q9ULT6 936 aa10.11□□□□□ -0.79
VMP1-204ENST00000587259 IBTKQ9P2D0 1353 aaPredicted RBP10.11□□□□□ -0.79
VMP1-204ENST00000587259 NEFMP07197 916 aa10.1□□□□□ -0.79
VMP1-204ENST00000587259 ECE1P42892 770 aa10.1□□□□□ -0.79
VMP1-204ENST00000587259 RTL5Q5HYW3 569 aaPredicted RBP10.1□□□□□ -0.79
VMP1-204ENST00000587259 CIAPIN1Q6FI81 312 aa10.1□□□□□ -0.79
VMP1-204ENST00000587259 USP48Q86UV5 1035 aa10.1□□□□□ -0.79
VMP1-204ENST00000587259 NLRP10Q86W26 655 aa10.1□□□□□ -0.79
VMP1-204ENST00000587259 MPNDQ8N594 471 aa10.1□□□□□ -0.79
VMP1-204ENST00000587259 BEGAINQ9BUH8 593 aa10.1□□□□□ -0.79
VMP1-204ENST00000587259 BCL2L13Q9BXK5 485 aa10.1□□□□□ -0.79
VMP1-204ENST00000587259 KCNQ5Q9NR82 932 aa10.1□□□□□ -0.79
VMP1-204ENST00000587259 LAMB2P55268 1798 aa10.1□□□□□ -0.79
VMP1-204ENST00000587259 TRPM7Q96QT4 1865 aa10.1□□□□□ -0.79
VMP1-204ENST00000587259 DUOX1Q9NRD9 1551 aa10.09□□□□□ -0.79
VMP1-204ENST00000587259 MAPK8IP3Q9UPT6 1336 aa10.09□□□□□ -0.79
VMP1-204ENST00000587259 RIMBP2O15034 1052 aa10.09□□□□□ -0.79
VMP1-204ENST00000587259 RIPK4P57078 832 aa10.09□□□□□ -0.79
VMP1-204ENST00000587259 KIAA2012Q0VF49 1180 aa10.09□□□□□ -0.79
VMP1-204ENST00000587259 NEUROD2Q15784 382 aa10.09□□□□□ -0.79
VMP1-204ENST00000587259 PARP10Q53GL7 1025 aa10.09□□□□□ -0.79
VMP1-204ENST00000587259 SLC10A5Q5PT55 438 aa10.09□□□□□ -0.79
VMP1-204ENST00000587259 SAMD7Q7Z3H4 446 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms