RNA–Protein interactions for RNA: ENST00000585672.5

MBD1-212, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-212ENST00000585672 KIF1CO43896 1103 aaKnown RBP17.35■□□□□ 0.37
MBD1-212ENST00000585672 SFPQP23246 707 aaKnown RBP eCLIP17.35■□□□□ 0.37
MBD1-212ENST00000585672 MAP2K2P36507 400 aa17.35■□□□□ 0.37
MBD1-212ENST00000585672 GNL2Q13823 731 aaKnown RBP17.35■□□□□ 0.37
MBD1-212ENST00000585672 AOPEPQ8N6M6 819 aa17.35■□□□□ 0.37
MBD1-212ENST00000585672 PDE11AQ9HCR9 933 aa17.35■□□□□ 0.37
MBD1-212ENST00000585672 MED4Q9NPJ6 270 aa17.35■□□□□ 0.37
MBD1-212ENST00000585672 LRRC31Q6UY01 552 aa17.34■□□□□ 0.37
MBD1-212ENST00000585672 RSRC2Q7L4I2 434 aaKnown RBP17.34■□□□□ 0.37
MBD1-212ENST00000585672 TMC6Q7Z403 805 aa17.34■□□□□ 0.37
MBD1-212ENST00000585672 MKRN1Q9UHC7 482 aaKnown RBP17.34■□□□□ 0.37
MBD1-212ENST00000585672 ADCY9O60503 1353 aa17.34■□□□□ 0.37
MBD1-212ENST00000585672 CFAP65Q6ZU64 1925 aaKnown RBP17.34■□□□□ 0.37
MBD1-212ENST00000585672 SATB1Q01826 763 aa17.34■□□□□ 0.37
MBD1-212ENST00000585672 APOBRQ0VD83 1088 aa17.34■□□□□ 0.37
MBD1-212ENST00000585672 DCTN1Q14203 1278 aa17.34■□□□□ 0.37
MBD1-212ENST00000585672 ANKRD20A12PQ8NF67 263 aa17.34■□□□□ 0.37
MBD1-212ENST00000585672 JAKMIP1Q96N16 626 aaKnown RBP17.34■□□□□ 0.37
MBD1-212ENST00000585672 SPG7Q9UQ90 795 aa17.34■□□□□ 0.37
MBD1-212ENST00000585672 FBLN1P23142 703 aa17.33■□□□□ 0.36
MBD1-212ENST00000585672 ATP6V1AP38606 617 aa17.33■□□□□ 0.36
MBD1-212ENST00000585672 EFCAB13Q8IY85 973 aa17.33■□□□□ 0.36
MBD1-212ENST00000585672 TPCN1Q9ULQ1 816 aa17.33■□□□□ 0.36
MBD1-212ENST00000585672 N4BP1O75113 896 aaKnown RBP17.32■□□□□ 0.36
MBD1-212ENST00000585672 CCDC30Q5VVM6 783 aa17.32■□□□□ 0.36
MBD1-212ENST00000585672 CWC27Q6UX04 472 aaKnown RBP17.32■□□□□ 0.36
MBD1-212ENST00000585672 DDX54Q8TDD1 881 aaKnown RBP17.32■□□□□ 0.36
MBD1-212ENST00000585672 AKAP2Q9Y2D5 859 aa17.32■□□□□ 0.36
MBD1-212ENST00000585672 TET3O43151 1660 aa17.32■□□□□ 0.36
MBD1-212ENST00000585672 FAM212AQ96EL1 285 aa17.32■□□□□ 0.36
MBD1-212ENST00000585672 PNMA6EA0A0J9YXQ4 647 aa17.31■□□□□ 0.36
MBD1-212ENST00000585672 LARP1Q6PKG0 1096 aaKnown RBP17.31■□□□□ 0.36
MBD1-212ENST00000585672 TADA2BQ86TJ2 420 aa17.31■□□□□ 0.36
MBD1-212ENST00000585672 XPO4Q9C0E2 1151 aaKnown RBP17.31■□□□□ 0.36
MBD1-212ENST00000585672 PLEKHA4Q9H4M7 779 aa17.31■□□□□ 0.36
MBD1-212ENST00000585672 ZSWIM6Q9HCJ5 1215 aa17.31■□□□□ 0.36
MBD1-212ENST00000585672 PPP6R1Q9UPN7 881 aa17.31■□□□□ 0.36
MBD1-212ENST00000585672 FAN1Q9Y2M0 1017 aa17.31■□□□□ 0.36
MBD1-212ENST00000585672 RIMS2Q9UQ26 1411 aa17.31■□□□□ 0.36
MBD1-212ENST00000585672 PDCP20941 246 aa17.31■□□□□ 0.36
MBD1-212ENST00000585672 CYP46A1Q9Y6A2 500 aa17.31■□□□□ 0.36
MBD1-212ENST00000585672 CCDC189A1A4V9 331 aa17.3■□□□□ 0.36
MBD1-212ENST00000585672 SRGAP3O43295 1099 aa17.3■□□□□ 0.36
MBD1-212ENST00000585672 GNAI2P04899 355 aa17.3■□□□□ 0.36
MBD1-212ENST00000585672 MCM6Q14566 821 aa17.3■□□□□ 0.36
MBD1-212ENST00000585672 SLC4A10Q6U841 1118 aa17.3■□□□□ 0.36
MBD1-212ENST00000585672 RABGGTAQ92696 567 aa17.3■□□□□ 0.36
MBD1-212ENST00000585672 ASXL2Q76L83 1435 aa17.3■□□□□ 0.36
MBD1-212ENST00000585672 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.3■□□□□ 0.36
MBD1-212ENST00000585672 MAP3K9P80192 1104 aa17.3■□□□□ 0.36
MBD1-212ENST00000585672 PPP2R3AQ06190 1150 aa17.3■□□□□ 0.36
MBD1-212ENST00000585672 FBXW7Q969H0 707 aa17.3■□□□□ 0.36
MBD1-212ENST00000585672 ANO10Q9NW15 660 aa17.3■□□□□ 0.36
MBD1-212ENST00000585672 IFNKQ9P0W0 207 aa17.3■□□□□ 0.36
MBD1-212ENST00000585672 AOX1Q06278 1338 aa17.3■□□□□ 0.36
MBD1-212ENST00000585672 MROH2AA6NES4 1674 aa17.3■□□□□ 0.36
MBD1-212ENST00000585672 CPSF1Q10570 1443 aaKnown RBP17.29■□□□□ 0.36
MBD1-212ENST00000585672 ADGRL3Q9HAR2 1447 aa17.29■□□□□ 0.36
MBD1-212ENST00000585672 CCDC151A5D8V7 595 aa17.29■□□□□ 0.36
MBD1-212ENST00000585672 PATL2C9JE40 543 aaKnown RBP17.29■□□□□ 0.36
MBD1-212ENST00000585672 F6X3S4 739 aa17.29■□□□□ 0.36
MBD1-212ENST00000585672 CCP110O43303 1012 aa17.29■□□□□ 0.36
MBD1-212ENST00000585672 TDO2P48775 406 aa17.29■□□□□ 0.36
MBD1-212ENST00000585672 NUTM1Q86Y26 1132 aa17.29■□□□□ 0.36
MBD1-212ENST00000585672 CD163L1Q9NR16 1453 aa17.29■□□□□ 0.36
MBD1-212ENST00000585672 CTAGE5O15320 804 aa17.29■□□□□ 0.36
MBD1-212ENST00000585672 ZRSR1Q15695 479 aaKnown RBP17.29■□□□□ 0.36
MBD1-212ENST00000585672 PLEKHO1Q53GL0 409 aaPredicted RBP17.29■□□□□ 0.36
MBD1-212ENST00000585672 EGFL6Q8IUX8 553 aa17.29■□□□□ 0.36
MBD1-212ENST00000585672 MICALL1Q8N3F8 863 aa17.29■□□□□ 0.36
MBD1-212ENST00000585672 DNAAF4Q8WXU2 420 aa17.29■□□□□ 0.36
MBD1-212ENST00000585672 KAT2BQ92831 832 aa17.29■□□□□ 0.36
MBD1-212ENST00000585672 A0A087WUV0 522 aaPredicted RBP17.28■□□□□ 0.36
MBD1-212ENST00000585672 CEP57L1Q8IYX8 460 aa17.28■□□□□ 0.36
MBD1-212ENST00000585672 ERCC4Q92889 916 aaPredicted RBP17.28■□□□□ 0.36
MBD1-212ENST00000585672 IL1RAPL2Q9NP60 686 aa17.28■□□□□ 0.36
MBD1-212ENST00000585672 CCDC196A0A1B0GTZ2 297 aa17.28■□□□□ 0.36
MBD1-212ENST00000585672 NRDCO43847 1150 aa17.28■□□□□ 0.36
MBD1-212ENST00000585672 TXLNAP40222 546 aa17.28■□□□□ 0.36
MBD1-212ENST00000585672 PSME1Q06323 249 aa17.28■□□□□ 0.36
MBD1-212ENST00000585672 PRPF40BQ6NWY9 871 aaKnown RBP17.28■□□□□ 0.36
MBD1-212ENST00000585672 SAMD1Q6SPF0 538 aaPredicted RBP17.28■□□□□ 0.36
MBD1-212ENST00000585672 FAM177A1Q8N128 213 aaPredicted RBP17.28■□□□□ 0.36
MBD1-212ENST00000585672 GOLPH3LQ9H4A5 285 aa17.28■□□□□ 0.36
MBD1-212ENST00000585672 MRFAP1Q9Y605 127 aa17.28■□□□□ 0.36
MBD1-212ENST00000585672 HECW2Q9P2P5 1572 aa17.27■□□□□ 0.36
MBD1-212ENST00000585672 PTH1RQ03431 593 aa17.27■□□□□ 0.36
MBD1-212ENST00000585672 COL9A3Q14050 684 aaPredicted RBP17.27■□□□□ 0.36
MBD1-212ENST00000585672 SAFB2Q14151 953 aaKnown RBP eCLIP17.27■□□□□ 0.36
MBD1-212ENST00000585672 BRD3Q15059 726 aa17.27■□□□□ 0.36
MBD1-212ENST00000585672 TM6SF1Q9BZW5 370 aa17.27■□□□□ 0.36
MBD1-212ENST00000585672 SLC4A2P04920 1241 aa17.27■□□□□ 0.36
MBD1-212ENST00000585672 BEND6Q5SZJ8 279 aaPredicted RBP17.27■□□□□ 0.36
MBD1-212ENST00000585672 JAKMIP3Q5VZ66 844 aa17.27■□□□□ 0.36
MBD1-212ENST00000585672 PI4K2BQ8TCG2 481 aa17.27■□□□□ 0.36
MBD1-212ENST00000585672 WDR24Q96S15 920 aa17.27■□□□□ 0.36
MBD1-212ENST00000585672 VWA3AA6NCI4 1184 aa17.26■□□□□ 0.35
MBD1-212ENST00000585672 GIGYF1O75420 1035 aaPredicted RBP17.26■□□□□ 0.35
MBD1-212ENST00000585672 CCAR1Q8IX12 1150 aaKnown RBP17.26■□□□□ 0.35
MBD1-212ENST00000585672 MPHOSPH8Q99549 860 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms