RNA–Protein interactions for RNA: ENST00000585315.5

CDH8-214, Transcript of cadherin 8, humanhuman

TSL 5

Gene CDH8, Length 9,076 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-214ENST00000585315 CNGA4Q8IV77 575 aa8.36□□□□□ -1.07
CDH8-214ENST00000585315 CEP63Q96MT8 703 aa8.36□□□□□ -1.07
CDH8-214ENST00000585315 ABCA10Q8WWZ4 1543 aa8.36□□□□□ -1.07
CDH8-214ENST00000585315 SNAPC4Q5SXM2 1469 aa8.36□□□□□ -1.07
CDH8-214ENST00000585315 RANBP6O60518 1105 aaKnown RBP8.36□□□□□ -1.07
CDH8-214ENST00000585315 CAPN2P17655 700 aa8.36□□□□□ -1.07
CDH8-214ENST00000585315 CALML3P27482 149 aa8.36□□□□□ -1.07
CDH8-214ENST00000585315 PPP1R42Q7Z4L9 355 aa8.36□□□□□ -1.07
CDH8-214ENST00000585315 HOMER2Q9NSB8 354 aa8.36□□□□□ -1.07
CDH8-214ENST00000585315 F13A1P00488 732 aa8.36□□□□□ -1.07
CDH8-214ENST00000585315 POLR3DP05423 398 aaPredicted RBP8.36□□□□□ -1.07
CDH8-214ENST00000585315 IDEP14735 1019 aa8.36□□□□□ -1.07
CDH8-214ENST00000585315 SDSP20132 328 aa8.36□□□□□ -1.07
CDH8-214ENST00000585315 OGFRQ9NZT2 677 aa8.36□□□□□ -1.07
CDH8-214ENST00000585315 PCF11O94913 1555 aaKnown RBP8.36□□□□□ -1.07
CDH8-214ENST00000585315 MPHOSPH10O00566 681 aaKnown RBP8.36□□□□□ -1.07
CDH8-214ENST00000585315 RHPN1Q8TCX5 695 aa8.36□□□□□ -1.07
CDH8-214ENST00000585315 GDPD2Q9HCC8 539 aa8.36□□□□□ -1.07
CDH8-214ENST00000585315 PRDM10Q9NQV6 1147 aa8.36□□□□□ -1.07
CDH8-214ENST00000585315 MCM6Q14566 821 aa8.36□□□□□ -1.07
CDH8-214ENST00000585315 DDX54Q8TDD1 881 aaKnown RBP8.36□□□□□ -1.07
CDH8-214ENST00000585315 ESYT1Q9BSJ8 1104 aa8.36□□□□□ -1.07
CDH8-214ENST00000585315 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.36□□□□□ -1.07
CDH8-214ENST00000585315 SMARCA5O60264 1052 aaPredicted RBP8.36□□□□□ -1.07
CDH8-214ENST00000585315 ANO6Q4KMQ2 910 aa8.36□□□□□ -1.07
CDH8-214ENST00000585315 ABCC5O15440 1437 aa8.36□□□□□ -1.07
CDH8-214ENST00000585315 BIN1O00499 593 aa8.36□□□□□ -1.07
CDH8-214ENST00000585315 SYT1P21579 422 aa8.36□□□□□ -1.07
CDH8-214ENST00000585315 CDC5LQ99459 802 aaKnown RBP8.36□□□□□ -1.07
CDH8-214ENST00000585315 EXOC1Q9NV70 894 aa8.36□□□□□ -1.07
CDH8-214ENST00000585315 MACROD2A1Z1Q3 448 aa8.35□□□□□ -1.07
CDH8-214ENST00000585315 TYRO3Q06418 890 aa8.35□□□□□ -1.07
CDH8-214ENST00000585315 CPLX3Q8WVH0 158 aa8.35□□□□□ -1.07
CDH8-214ENST00000585315 DACT1Q9NYF0 836 aa8.35□□□□□ -1.07
CDH8-214ENST00000585315 GIMAP6Q6P9H5 292 aa8.35□□□□□ -1.07
CDH8-214ENST00000585315 TBC1D5Q92609 795 aa8.35□□□□□ -1.07
CDH8-214ENST00000585315 JAKMIP2Q96AA8 810 aa8.35□□□□□ -1.07
CDH8-214ENST00000585315 THUMPD2Q9BTF0 503 aaKnown RBP8.35□□□□□ -1.07
CDH8-214ENST00000585315 CTNNBL1Q8WYA6 563 aaPredicted RBP8.35□□□□□ -1.07
CDH8-214ENST00000585315 BCCIPQ9P287 314 aaKnown RBP eCLIP8.35□□□□□ -1.07
CDH8-214ENST00000585315 POLR3AO14802 1390 aaPredicted RBP8.35□□□□□ -1.07
CDH8-214ENST00000585315 BICDL2A1A5D9 508 aa8.35□□□□□ -1.07
CDH8-214ENST00000585315 ZBTB43O43298 467 aa8.35□□□□□ -1.07
CDH8-214ENST00000585315 TCERG1LQ5VWI1 586 aa8.35□□□□□ -1.07
CDH8-214ENST00000585315 CROCCP2Q86T23 111 aa8.35□□□□□ -1.07
CDH8-214ENST00000585315 MICU3Q86XE3 530 aa8.35□□□□□ -1.07
CDH8-214ENST00000585315 ESR2Q92731 530 aa8.35□□□□□ -1.07
CDH8-214ENST00000585315 IQCGQ9H095 443 aaKnown RBP8.35□□□□□ -1.07
CDH8-214ENST00000585315 PARD3Q8TEW0 1356 aa8.35□□□□□ -1.07
CDH8-214ENST00000585315 NUTM2AQ8IVF1 878 aaPredicted RBP8.35□□□□□ -1.07
CDH8-214ENST00000585315 THOC2Q8NI27 1593 aaKnown RBP8.35□□□□□ -1.07
CDH8-214ENST00000585315 MATR3P43243 847 aaKnown RBP eCLIP8.35□□□□□ -1.07
CDH8-214ENST00000585315 GABPB1Q06547 395 aaPredicted RBP8.35□□□□□ -1.07
CDH8-214ENST00000585315 CCDC96Q2M329 555 aa8.35□□□□□ -1.07
CDH8-214ENST00000585315 B4GALNT4Q76KP1 1039 aa8.35□□□□□ -1.07
CDH8-214ENST00000585315 SMAP1Q8IYB5 467 aaPredicted RBP8.35□□□□□ -1.07
CDH8-214ENST00000585315 CRACR2BQ8N4Y2 399 aaPredicted RBP8.35□□□□□ -1.07
CDH8-214ENST00000585315 CCT2P78371 535 aaKnown RBP8.34□□□□□ -1.07
CDH8-214ENST00000585315 CEP128Q6ZU80 1094 aa8.34□□□□□ -1.07
CDH8-214ENST00000585315 ERO1AQ96HE7 468 aa8.34□□□□□ -1.07
CDH8-214ENST00000585315 CCDC42Q96M95 316 aa8.34□□□□□ -1.07
CDH8-214ENST00000585315 FERP16591 822 aa8.34□□□□□ -1.07
CDH8-214ENST00000585315 UBE4AQ14139 1066 aa8.34□□□□□ -1.07
CDH8-214ENST00000585315 CCDC174Q6PII3 467 aa8.34□□□□□ -1.07
CDH8-214ENST00000585315 OTUD6BQ8N6M0 293 aa8.34□□□□□ -1.07
CDH8-214ENST00000585315 TMOD3Q9NYL9 352 aa8.34□□□□□ -1.07
CDH8-214ENST00000585315 CC2D2AQ9P2K1 1620 aa8.34□□□□□ -1.07
CDH8-214ENST00000585315 WASLO00401 505 aaPredicted RBP8.34□□□□□ -1.07
CDH8-214ENST00000585315 GTF2A1P52655 376 aaPredicted RBP8.34□□□□□ -1.07
CDH8-214ENST00000585315 USP48Q86UV5 1035 aa8.34□□□□□ -1.07
CDH8-214ENST00000585315 BRF1Q92994 677 aa8.34□□□□□ -1.07
CDH8-214ENST00000585315 CCDC8Q9H0W5 538 aaPredicted RBP8.34□□□□□ -1.07
CDH8-214ENST00000585315 DCTPP1Q9H773 170 aa8.34□□□□□ -1.07
CDH8-214ENST00000585315 CWC25Q9NXE8 425 aaPredicted RBP8.34□□□□□ -1.07
CDH8-214ENST00000585315 STIM2Q9P246 746 aa8.34□□□□□ -1.07
CDH8-214ENST00000585315 ZHX1Q9UKY1 873 aaPredicted RBP8.34□□□□□ -1.07
CDH8-214ENST00000585315 SPTLC2O15270 562 aa8.34□□□□□ -1.07
CDH8-214ENST00000585315 MYO1BO43795 1136 aa8.34□□□□□ -1.07
CDH8-214ENST00000585315 IPO4Q8TEX9 1081 aaKnown RBP8.34□□□□□ -1.07
CDH8-214ENST00000585315 INSRP06213 1382 aa8.34□□□□□ -1.07
CDH8-214ENST00000585315 TRIM75PA6NK02 468 aa8.34□□□□□ -1.07
CDH8-214ENST00000585315 TBCAO75347 108 aaKnown RBP8.34□□□□□ -1.07
CDH8-214ENST00000585315 RBM5P52756 815 aaKnown RBP eCLIP8.34□□□□□ -1.07
CDH8-214ENST00000585315 HDXQ7Z353 690 aa8.34□□□□□ -1.07
CDH8-214ENST00000585315 A0A1B0GUA9 196 aa8.34□□□□□ -1.08
CDH8-214ENST00000585315 CALM1P0DP23 149 aa8.34□□□□□ -1.08
CDH8-214ENST00000585315 CALM2P0DP24 149 aa8.34□□□□□ -1.08
CDH8-214ENST00000585315 CALM3P0DP25 149 aa8.34□□□□□ -1.08
CDH8-214ENST00000585315 ATRIPQ8WXE1 791 aa8.34□□□□□ -1.08
CDH8-214ENST00000585315 TSNARE1Q96NA8 513 aa8.34□□□□□ -1.08
CDH8-214ENST00000585315 SMC6Q96SB8 1091 aa8.34□□□□□ -1.08
CDH8-214ENST00000585315 NBPF11Q86T75 865 aa8.33□□□□□ -1.08
CDH8-214ENST00000585315 UBA5Q9GZZ9 404 aa8.33□□□□□ -1.08
CDH8-214ENST00000585315 PRPF4BQ13523 1007 aaKnown RBP8.33□□□□□ -1.08
CDH8-214ENST00000585315 WTAPQ15007 396 aa8.33□□□□□ -1.08
CDH8-214ENST00000585315 CCDC6Q16204 474 aa8.33□□□□□ -1.08
CDH8-214ENST00000585315 CCDC121Q6ZUS5 278 aa8.33□□□□□ -1.08
CDH8-214ENST00000585315 ZMYM3Q14202 1370 aa8.33□□□□□ -1.08
CDH8-214ENST00000585315 GUCY1B3Q02153 619 aa8.33□□□□□ -1.08
CDH8-214ENST00000585315 CCDC110Q8TBZ0 833 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms