RNA–Protein interactions for RNA: ENST00000585031.2

TOP3A-220, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-220ENST00000585031 USP48Q86UV5 1035 aa24.08■■□□□ 1.45
TOP3A-220ENST00000585031 CFAP53Q96M91 514 aa24.08■■□□□ 1.45
TOP3A-220ENST00000585031 SLC10A5Q5PT55 438 aa24.07■■□□□ 1.44
TOP3A-220ENST00000585031 LRP10Q7Z4F1 713 aa24.07■■□□□ 1.44
TOP3A-220ENST00000585031 SAGE1Q9NXZ1 904 aa24.07■■□□□ 1.44
TOP3A-220ENST00000585031 NUDCQ9Y266 331 aa24.07■■□□□ 1.44
TOP3A-220ENST00000585031 ANKRD36CQ5JPF3 1778 aa24.06■■□□□ 1.44
TOP3A-220ENST00000585031 FAM155AB1AL88 458 aaPredicted RBP24.06■■□□□ 1.44
TOP3A-220ENST00000585031 HUNKP57058 714 aa24.06■■□□□ 1.44
TOP3A-220ENST00000585031 KIAA2012Q0VF49 1180 aa24.06■■□□□ 1.44
TOP3A-220ENST00000585031 NLRP3Q96P20 1036 aa24.06■■□□□ 1.44
TOP3A-220ENST00000585031 THUMPD2Q9BTF0 503 aaKnown RBP24.06■■□□□ 1.44
TOP3A-220ENST00000585031 CDHR2Q9BYE9 1310 aa24.06■■□□□ 1.44
TOP3A-220ENST00000585031 DUOX1Q9NRD9 1551 aa24.05■■□□□ 1.44
TOP3A-220ENST00000585031 PPP2R1AP30153 589 aa24.05■■□□□ 1.44
TOP3A-220ENST00000585031 CNOT7Q9UIV1 285 aaKnown RBP24.05■■□□□ 1.44
TOP3A-220ENST00000585031 SP8Q8IXZ3 490 aa24.04■■□□□ 1.44
TOP3A-220ENST00000585031 BCL2L13Q9BXK5 485 aa24.04■■□□□ 1.44
TOP3A-220ENST00000585031 EGFRP00533 1210 aa24.03■■□□□ 1.44
TOP3A-220ENST00000585031 PDIA6Q15084 440 aa24.03■■□□□ 1.44
TOP3A-220ENST00000585031 DPP8Q6V1X1 898 aaPredicted RBP24.03■■□□□ 1.44
TOP3A-220ENST00000585031 PPP1R42Q7Z4L9 355 aa24.03■■□□□ 1.44
TOP3A-220ENST00000585031 ZBTB12Q9Y330 459 aaPredicted RBP24.03■■□□□ 1.44
TOP3A-220ENST00000585031 SAMD7Q7Z3H4 446 aa24.02■■□□□ 1.44
TOP3A-220ENST00000585031 MPNDQ8N594 471 aa24.02■■□□□ 1.44
TOP3A-220ENST00000585031 SUPT20HQ8NEM7 779 aa24.02■■□□□ 1.44
TOP3A-220ENST00000585031 RNF186Q9NXI6 227 aa24.02■■□□□ 1.44
TOP3A-220ENST00000585031 AKAP11Q9UKA4 1901 aa24.02■■□□□ 1.44
TOP3A-220ENST00000585031 HCLS1P14317 486 aaPredicted RBP24.01■■□□□ 1.43
TOP3A-220ENST00000585031 TNIP1Q15025 636 aa24.01■■□□□ 1.43
TOP3A-220ENST00000585031 PROSER3Q2NL68 480 aa24.01■■□□□ 1.43
TOP3A-220ENST00000585031 RGMBQ6NW40 437 aa24.01■■□□□ 1.43
TOP3A-220ENST00000585031 MICALL2Q8IY33 904 aa24.01■■□□□ 1.43
TOP3A-220ENST00000585031 UTP14AQ9BVJ6 771 aaKnown RBP24.01■■□□□ 1.43
TOP3A-220ENST00000585031 BBOX1O75936 387 aa24■■□□□ 1.43
TOP3A-220ENST00000585031 ANXA1P04083 346 aa24■■□□□ 1.43
TOP3A-220ENST00000585031 KIF23Q02241 960 aaPredicted RBP24■■□□□ 1.43
TOP3A-220ENST00000585031 PARP10Q53GL7 1025 aa24■■□□□ 1.43
TOP3A-220ENST00000585031 CCDC102AQ96A19 550 aa24■■□□□ 1.43
TOP3A-220ENST00000585031 TMX4Q9H1E5 349 aaPredicted RBP24■■□□□ 1.43
TOP3A-220ENST00000585031 COL4A1P02462 1669 aa23.99■■□□□ 1.43
TOP3A-220ENST00000585031 TRPA1O75762 1119 aa23.99■■□□□ 1.43
TOP3A-220ENST00000585031 PNISRQ8TF01 805 aaKnown RBP23.98■■□□□ 1.43
TOP3A-220ENST00000585031 KCNQ5Q9NR82 932 aa23.98■■□□□ 1.43
TOP3A-220ENST00000585031 LRRC37AA6NMS7 1700 aa23.98■■□□□ 1.43
TOP3A-220ENST00000585031 ADM5C9JUS6 153 aa23.97■■□□□ 1.43
TOP3A-220ENST00000585031 H7C1D1 291 aa23.97■■□□□ 1.43
TOP3A-220ENST00000585031 PSMD14O00487 310 aa23.97■■□□□ 1.43
TOP3A-220ENST00000585031 TBC1D10BQ4KMP7 808 aaPredicted RBP23.97■■□□□ 1.43
TOP3A-220ENST00000585031 CCER1Q8TC90 406 aaPredicted RBP23.97■■□□□ 1.43
TOP3A-220ENST00000585031 ZNF428Q96B54 188 aa23.97■■□□□ 1.43
TOP3A-220ENST00000585031 CTU1Q7Z7A3 348 aaKnown RBP23.96■■□□□ 1.43
TOP3A-220ENST00000585031 DPF2Q92785 391 aa23.96■■□□□ 1.43
TOP3A-220ENST00000585031 CSRNP1Q96S65 589 aa23.96■■□□□ 1.43
TOP3A-220ENST00000585031 PLEKHF1Q96S99 279 aa23.96■■□□□ 1.43
TOP3A-220ENST00000585031 GBA2Q9HCG7 927 aaPredicted RBP23.96■■□□□ 1.43
TOP3A-220ENST00000585031 KRT26Q7Z3Y9 468 aa23.95■■□□□ 1.42
TOP3A-220ENST00000585031 NLRP10Q86W26 655 aa23.95■■□□□ 1.42
TOP3A-220ENST00000585031 C2orf69Q8N8R5 385 aa23.95■■□□□ 1.42
TOP3A-220ENST00000585031 SCN9AQ15858 1988 aa23.94■■□□□ 1.42
TOP3A-220ENST00000585031 ERBB4Q15303 1308 aa23.94■■□□□ 1.42
TOP3A-220ENST00000585031 DDX60Q8IY21 1712 aaKnown RBP23.94■■□□□ 1.42
TOP3A-220ENST00000585031 ZNF157P51786 506 aaPredicted RBP23.94■■□□□ 1.42
TOP3A-220ENST00000585031 GRAPQ13588 217 aa23.94■■□□□ 1.42
TOP3A-220ENST00000585031 GRAPLQ8TC17 118 aaPredicted RBP23.94■■□□□ 1.42
TOP3A-220ENST00000585031 ASTN2O75129 1339 aaPredicted RBP23.93■■□□□ 1.42
TOP3A-220ENST00000585031 EIF2S2P20042 333 aaKnown RBP23.93■■□□□ 1.42
TOP3A-220ENST00000585031 DBNDD1Q9H9R9 158 aa23.93■■□□□ 1.42
TOP3A-220ENST00000585031 ZEB1P37275 1124 aaPredicted RBP23.92■■□□□ 1.42
TOP3A-220ENST00000585031 RBM26Q5T8P6 1007 aaKnown RBP23.92■■□□□ 1.42
TOP3A-220ENST00000585031 DDX46Q7L014 1031 aaKnown RBP23.92■■□□□ 1.42
TOP3A-220ENST00000585031 RTL9Q8NET4 1388 aa23.91■■□□□ 1.42
TOP3A-220ENST00000585031 SLC10A3P09131 477 aa23.91■■□□□ 1.42
TOP3A-220ENST00000585031 NFE2L2Q16236 605 aa23.91■■□□□ 1.42
TOP3A-220ENST00000585031 HPS5Q9UPZ3 1129 aa23.91■■□□□ 1.42
TOP3A-220ENST00000585031 RIMBP2O15034 1052 aa23.9■■□□□ 1.42
TOP3A-220ENST00000585031 POLLQ9UGP5 575 aa23.9■■□□□ 1.42
TOP3A-220ENST00000585031 COPS6Q7L5N1 327 aa23.89■■□□□ 1.41
TOP3A-220ENST00000585031 TRMT112Q9UI30 125 aaKnown RBP23.89■■□□□ 1.41
TOP3A-220ENST00000585031 AIMP1Q12904 312 aaKnown RBP23.88■■□□□ 1.41
TOP3A-220ENST00000585031 PKN2Q16513 984 aaKnown RBP23.88■■□□□ 1.41
TOP3A-220ENST00000585031 DOK7Q18PE1 504 aa23.88■■□□□ 1.41
TOP3A-220ENST00000585031 WASHC4Q2M389 1173 aa23.88■■□□□ 1.41
TOP3A-220ENST00000585031 REM2Q8IYK8 340 aaPredicted RBP23.88■■□□□ 1.41
TOP3A-220ENST00000585031 XAGE3Q8WTP9 111 aa23.88■■□□□ 1.41
TOP3A-220ENST00000585031 NECTIN2Q92692 538 aa23.88■■□□□ 1.41
TOP3A-220ENST00000585031 CELF1Q92879 486 aaKnown RBP23.88■■□□□ 1.41
TOP3A-220ENST00000585031 TCIRG1Q13488 830 aa23.87■■□□□ 1.41
TOP3A-220ENST00000585031 DCPSQ96C86 337 aaKnown RBP23.87■■□□□ 1.41
TOP3A-220ENST00000585031 MKI67P46013 3256 aaKnown RBP23.86■■□□□ 1.41
TOP3A-220ENST00000585031 GPSM2P81274 684 aa23.86■■□□□ 1.41
TOP3A-220ENST00000585031 TSPYL4Q9UJ04 414 aa23.86■■□□□ 1.41
TOP3A-220ENST00000585031 NSFL1CQ9UNZ2 370 aaKnown RBP23.86■■□□□ 1.41
TOP3A-220ENST00000585031 SH3TC1Q8TE82 1336 aa23.85■■□□□ 1.41
TOP3A-220ENST00000585031 ECE2O60344 883 aa23.85■■□□□ 1.41
TOP3A-220ENST00000585031 RPS12P25398 132 aaKnown RBP23.84■■□□□ 1.41
TOP3A-220ENST00000585031 GCC1Q96CN9 775 aa23.84■■□□□ 1.41
TOP3A-220ENST00000585031 GGA3Q9NZ52 723 aa23.84■■□□□ 1.41
TOP3A-220ENST00000585031 KIF4BQ2VIQ3 1234 aa23.83■■□□□ 1.41
TOP3A-220ENST00000585031 RASAL3Q86YV0 1011 aa23.83■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms