RNA–Protein interactions for RNA: ENST00000584944.5

TRAF4-215, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-215ENST00000584944 DZIP1LQ8IYY4 767 aaKnown RBP17.45■□□□□ 0.38
TRAF4-215ENST00000584944 CCDC88AQ3V6T2 1871 aa17.44■□□□□ 0.38
TRAF4-215ENST00000584944 NPR1P16066 1061 aa17.44■□□□□ 0.38
TRAF4-215ENST00000584944 JARID2Q92833 1246 aaPredicted RBP17.44■□□□□ 0.38
TRAF4-215ENST00000584944 RBM17Q96I25 401 aaKnown RBP17.44■□□□□ 0.38
TRAF4-215ENST00000584944 ABCC12Q96J65 1359 aa17.43■□□□□ 0.38
TRAF4-215ENST00000584944 GLTPD2A6NH11 291 aa17.43■□□□□ 0.38
TRAF4-215ENST00000584944 SLC10A5Q5PT55 438 aa17.43■□□□□ 0.38
TRAF4-215ENST00000584944 DDX46Q7L014 1031 aaKnown RBP17.43■□□□□ 0.38
TRAF4-215ENST00000584944 ITPRIPQ8IWB1 547 aa17.43■□□□□ 0.38
TRAF4-215ENST00000584944 CNKSR1Q969H4 720 aa17.43■□□□□ 0.38
TRAF4-215ENST00000584944 MASTLQ96GX5 879 aa17.43■□□□□ 0.38
TRAF4-215ENST00000584944 WDR90Q96KV7 1748 aa17.43■□□□□ 0.38
TRAF4-215ENST00000584944 PDE8AO60658 829 aa17.42■□□□□ 0.38
TRAF4-215ENST00000584944 ALDH1B1P30837 517 aa17.42■□□□□ 0.38
TRAF4-215ENST00000584944 CCDC152Q4G0S7 254 aa17.42■□□□□ 0.38
TRAF4-215ENST00000584944 SYNE4Q8N205 404 aa17.42■□□□□ 0.38
TRAF4-215ENST00000584944 CHMP3Q9Y3E7 222 aa17.42■□□□□ 0.38
TRAF4-215ENST00000584944 CDHR2Q9BYE9 1310 aa17.42■□□□□ 0.38
TRAF4-215ENST00000584944 H7C1W4 665 aa17.41■□□□□ 0.38
TRAF4-215ENST00000584944 UBTFL1P0CB47 393 aaPredicted RBP17.41■□□□□ 0.38
TRAF4-215ENST00000584944 STYK1Q6J9G0 422 aa17.41■□□□□ 0.38
TRAF4-215ENST00000584944 CHMP4BQ9H444 224 aaKnown RBP17.41■□□□□ 0.38
TRAF4-215ENST00000584944 ABCC4O15439 1325 aa17.41■□□□□ 0.38
TRAF4-215ENST00000584944 COL11A2P13942 1736 aaPredicted RBP17.41■□□□□ 0.38
TRAF4-215ENST00000584944 C21orf2O43822 256 aa17.4■□□□□ 0.38
TRAF4-215ENST00000584944 PLIN1O60240 522 aa17.4■□□□□ 0.38
TRAF4-215ENST00000584944 GNAI3P08754 354 aa17.4■□□□□ 0.38
TRAF4-215ENST00000584944 SRGNP10124 158 aa17.4■□□□□ 0.38
TRAF4-215ENST00000584944 VEGFAP15692 232 aaPredicted RBP17.4■□□□□ 0.38
TRAF4-215ENST00000584944 HTRA3P83110 453 aa17.4■□□□□ 0.38
TRAF4-215ENST00000584944 INTS3Q68E01 1043 aaKnown RBP17.4■□□□□ 0.38
TRAF4-215ENST00000584944 SMC1BQ8NDV3 1235 aa17.4■□□□□ 0.38
TRAF4-215ENST00000584944 FER1L6Q2WGJ9 1857 aa17.39■□□□□ 0.38
TRAF4-215ENST00000584944 RIC1Q4ADV7 1423 aa17.39■□□□□ 0.38
TRAF4-215ENST00000584944 CENPBP07199 599 aaPredicted RBP17.39■□□□□ 0.37
TRAF4-215ENST00000584944 CTSWP56202 376 aa17.39■□□□□ 0.37
TRAF4-215ENST00000584944 TMEM57Q8N5G2 664 aa17.39■□□□□ 0.37
TRAF4-215ENST00000584944 KLRG1Q96E93 195 aa17.39■□□□□ 0.37
TRAF4-215ENST00000584944 TIAM2Q8IVF5 1701 aa17.38■□□□□ 0.37
TRAF4-215ENST00000584944 TAF7LQ5H9L4 462 aa17.38■□□□□ 0.37
TRAF4-215ENST00000584944 PANK1Q8TE04 598 aa17.38■□□□□ 0.37
TRAF4-215ENST00000584944 CCDC85AQ96PX6 553 aaPredicted RBP17.38■□□□□ 0.37
TRAF4-215ENST00000584944 ZNF219Q9P2Y4 722 aaPredicted RBP17.38■□□□□ 0.37
TRAF4-215ENST00000584944 DICER1Q9UPY3 1922 aaKnown RBP17.37■□□□□ 0.37
TRAF4-215ENST00000584944 KLRG2A4D1S0 409 aaPredicted RBP17.37■□□□□ 0.37
TRAF4-215ENST00000584944 POTECB2RU33 542 aa17.37■□□□□ 0.37
TRAF4-215ENST00000584944 NBPF7P0C2Y1 421 aaPredicted RBP17.37■□□□□ 0.37
TRAF4-215ENST00000584944 CRY2Q49AN0 593 aa17.37■□□□□ 0.37
TRAF4-215ENST00000584944 LTBP3Q9NS15 1303 aa17.37■□□□□ 0.37
TRAF4-215ENST00000584944 SLX4Q8IY92 1834 aa17.37■□□□□ 0.37
TRAF4-215ENST00000584944 PDE3AQ14432 1141 aa17.36■□□□□ 0.37
TRAF4-215ENST00000584944 SF3B3Q15393 1217 aaKnown RBP17.36■□□□□ 0.37
TRAF4-215ENST00000584944 SOGA3Q5TF21 947 aa17.36■□□□□ 0.37
TRAF4-215ENST00000584944 DPY19L2Q6NUT2 758 aa17.36■□□□□ 0.37
TRAF4-215ENST00000584944 PRPF40BQ6NWY9 871 aaKnown RBP17.36■□□□□ 0.37
TRAF4-215ENST00000584944 JMYQ8N9B5 988 aa17.36■□□□□ 0.37
TRAF4-215ENST00000584944 CRAMP1Q96RY5 1269 aa17.36■□□□□ 0.37
TRAF4-215ENST00000584944 CDC5LQ99459 802 aaKnown RBP17.36■□□□□ 0.37
TRAF4-215ENST00000584944 USP44Q9H0E7 712 aa17.36■□□□□ 0.37
TRAF4-215ENST00000584944 TNNQ9UQP3 1299 aa17.36■□□□□ 0.37
TRAF4-215ENST00000584944 HOXA10P31260 410 aaPredicted RBP17.35■□□□□ 0.37
TRAF4-215ENST00000584944 RRP1P56182 461 aaKnown RBP17.35■□□□□ 0.37
TRAF4-215ENST00000584944 IFIT5Q13325 482 aaKnown RBP17.35■□□□□ 0.37
TRAF4-215ENST00000584944 CCDC57Q2TAC2 916 aa17.35■□□□□ 0.37
TRAF4-215ENST00000584944 C3orf67Q6ZVT6 689 aa17.35■□□□□ 0.37
TRAF4-215ENST00000584944 ANKRD18BA2A2Z9 1011 aa17.34■□□□□ 0.37
TRAF4-215ENST00000584944 PPEF1O14829 653 aaPredicted RBP17.34■□□□□ 0.37
TRAF4-215ENST00000584944 BBOX1O75936 387 aa17.34■□□□□ 0.37
TRAF4-215ENST00000584944 LMBR1LQ6UX01 489 aa17.34■□□□□ 0.37
TRAF4-215ENST00000584944 ANKRD18AQ8IVF6 992 aa17.34■□□□□ 0.37
TRAF4-215ENST00000584944 PLA2G12BQ9BX93 195 aa17.34■□□□□ 0.37
TRAF4-215ENST00000584944 TAOK3Q9H2K8 898 aa17.34■□□□□ 0.37
TRAF4-215ENST00000584944 DDX19BQ9UMR2 479 aa17.34■□□□□ 0.37
TRAF4-215ENST00000584944 CACNA1SQ13698 1873 aa17.33■□□□□ 0.37
TRAF4-215ENST00000584944 UTYO14607 1347 aa17.33■□□□□ 0.36
TRAF4-215ENST00000584944 GNAI2P04899 355 aa17.33■□□□□ 0.36
TRAF4-215ENST00000584944 IGHMBP2P38935 993 aaKnown RBP17.33■□□□□ 0.36
TRAF4-215ENST00000584944 GRAPQ13588 217 aa17.33■□□□□ 0.36
TRAF4-215ENST00000584944 MVPQ14764 893 aaKnown RBP17.33■□□□□ 0.36
TRAF4-215ENST00000584944 TMC4Q7Z404 712 aa17.33■□□□□ 0.36
TRAF4-215ENST00000584944 TTLL11Q8NHH1 800 aa17.33■□□□□ 0.36
TRAF4-215ENST00000584944 GRAPLQ8TC17 118 aaPredicted RBP17.33■□□□□ 0.36
TRAF4-215ENST00000584944 C7orf43Q8WVR3 580 aa17.33■□□□□ 0.36
TRAF4-215ENST00000584944 SUCLG2Q96I99 432 aa17.33■□□□□ 0.36
TRAF4-215ENST00000584944 MPHOSPH8Q99549 860 aa17.33■□□□□ 0.36
TRAF4-215ENST00000584944 MEIS3Q99687 375 aa17.33■□□□□ 0.36
TRAF4-215ENST00000584944 COG6Q9Y2V7 657 aa17.33■□□□□ 0.36
TRAF4-215ENST00000584944 PCNTO95613 3336 aa17.32■□□□□ 0.36
TRAF4-215ENST00000584944 RLBP1P12271 317 aa17.32■□□□□ 0.36
TRAF4-215ENST00000584944 CASP7P55210 303 aa17.32■□□□□ 0.36
TRAF4-215ENST00000584944 BICC1Q9H694 974 aaKnown RBP17.32■□□□□ 0.36
TRAF4-215ENST00000584944 GREM2Q9H772 168 aa17.32■□□□□ 0.36
TRAF4-215ENST00000584944 LRRFIP2Q9Y608 721 aaKnown RBP17.32■□□□□ 0.36
TRAF4-215ENST00000584944 ITGA6P23229 1130 aa17.31■□□□□ 0.36
TRAF4-215ENST00000584944 RPS8P62241 208 aaKnown RBP17.31■□□□□ 0.36
TRAF4-215ENST00000584944 FAM161AQ3B820 660 aa17.31■□□□□ 0.36
TRAF4-215ENST00000584944 SUPT16HQ9Y5B9 1047 aaKnown RBP17.31■□□□□ 0.36
TRAF4-215ENST00000584944 FOXO4P98177 505 aa17.3■□□□□ 0.36
TRAF4-215ENST00000584944 GRIPAP1Q4V328 841 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 289.6 ms