RNA–Protein interactions for RNA: ENST00000584582.5

TOP3A-217, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 3,661 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-217ENST00000584582 SLC27A2O14975 620 aa13.39□□□□□ -0.27
TOP3A-217ENST00000584582 RXRAP19793 462 aa13.39□□□□□ -0.27
TOP3A-217ENST00000584582 PI16Q6UXB8 463 aa13.39□□□□□ -0.27
TOP3A-217ENST00000584582 GPT2Q8TD30 523 aa13.39□□□□□ -0.27
TOP3A-217ENST00000584582 RGS12O14924 1447 aa13.39□□□□□ -0.27
TOP3A-217ENST00000584582 POLA2Q14181 598 aa13.39□□□□□ -0.27
TOP3A-217ENST00000584582 BRINP3Q76B58 766 aa13.39□□□□□ -0.27
TOP3A-217ENST00000584582 PLBD2Q8NHP8 589 aa13.39□□□□□ -0.27
TOP3A-217ENST00000584582 LSG1Q9H089 658 aaKnown RBP13.39□□□□□ -0.27
TOP3A-217ENST00000584582 USP32Q8NFA0 1604 aa13.39□□□□□ -0.27
TOP3A-217ENST00000584582 KIF20BQ96Q89 1820 aa13.39□□□□□ -0.27
TOP3A-217ENST00000584582 SNAP23O00161 211 aa13.38□□□□□ -0.27
TOP3A-217ENST00000584582 JAK2O60674 1132 aa13.38□□□□□ -0.27
TOP3A-217ENST00000584582 PAG1Q9NWQ8 432 aa13.38□□□□□ -0.27
TOP3A-217ENST00000584582 APOBRQ0VD83 1088 aa13.38□□□□□ -0.27
TOP3A-217ENST00000584582 ME3Q16798 604 aa13.38□□□□□ -0.27
TOP3A-217ENST00000584582 TTLL5Q6EMB2 1281 aa13.38□□□□□ -0.27
TOP3A-217ENST00000584582 ADGRL3Q9HAR2 1447 aa13.38□□□□□ -0.27
TOP3A-217ENST00000584582 ME1P48163 572 aa13.38□□□□□ -0.27
TOP3A-217ENST00000584582 CCDC173Q0VFZ6 552 aa13.38□□□□□ -0.27
TOP3A-217ENST00000584582 CREBRFQ8IUR6 639 aa13.38□□□□□ -0.27
TOP3A-217ENST00000584582 ZDHHC9Q9Y397 364 aa13.37□□□□□ -0.27
TOP3A-217ENST00000584582 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.37□□□□□ -0.27
TOP3A-217ENST00000584582 ANKARQ7Z5J8 1434 aa13.37□□□□□ -0.27
TOP3A-217ENST00000584582 POLR3DP05423 398 aaPredicted RBP13.37□□□□□ -0.27
TOP3A-217ENST00000584582 PDCP20941 246 aa13.37□□□□□ -0.27
TOP3A-217ENST00000584582 ZSCAN31Q96LW9 406 aaPredicted RBP13.37□□□□□ -0.27
TOP3A-217ENST00000584582 TAF6LQ9Y6J9 622 aa13.37□□□□□ -0.27
TOP3A-217ENST00000584582 RIMS1Q86UR5 1692 aaKnown RBP13.37□□□□□ -0.27
TOP3A-217ENST00000584582 BECN2A8MW95 431 aa13.37□□□□□ -0.27
TOP3A-217ENST00000584582 SDF4Q9BRK5 362 aa13.37□□□□□ -0.27
TOP3A-217ENST00000584582 JAG2Q9Y219 1238 aa13.37□□□□□ -0.27
TOP3A-217ENST00000584582 MCMDC2Q4G0Z9 681 aa13.36□□□□□ -0.27
TOP3A-217ENST00000584582 OTUD7BQ6GQQ9 843 aa13.36□□□□□ -0.27
TOP3A-217ENST00000584582 TAF5LO75529 589 aa13.36□□□□□ -0.27
TOP3A-217ENST00000584582 F13A1P00488 732 aa13.36□□□□□ -0.27
TOP3A-217ENST00000584582 FAM182BQ5T319 152 aa13.36□□□□□ -0.27
TOP3A-217ENST00000584582 TPCN1Q9ULQ1 816 aa13.36□□□□□ -0.27
TOP3A-217ENST00000584582 PCDH11XQ9BZA7 1347 aa13.36□□□□□ -0.27
TOP3A-217ENST00000584582 PCDH11YQ9BZA8 1340 aa13.36□□□□□ -0.27
TOP3A-217ENST00000584582 NRKQ7Z2Y5 1582 aa13.36□□□□□ -0.27
TOP3A-217ENST00000584582 TULP1O00294 542 aaPredicted RBP13.36□□□□□ -0.27
TOP3A-217ENST00000584582 RBM10P98175 930 aaKnown RBP13.36□□□□□ -0.27
TOP3A-217ENST00000584582 PTPN12Q05209 780 aaKnown RBP13.36□□□□□ -0.27
TOP3A-217ENST00000584582 ANKRD1Q15327 319 aa13.36□□□□□ -0.27
TOP3A-217ENST00000584582 VPS53Q5VIR6 699 aa13.36□□□□□ -0.27
TOP3A-217ENST00000584582 TNMDQ9H2S6 317 aa13.36□□□□□ -0.27
TOP3A-217ENST00000584582 SASS6Q6UVJ0 657 aa13.35□□□□□ -0.27
TOP3A-217ENST00000584582 FAM13BQ9NYF5 915 aa13.35□□□□□ -0.27
TOP3A-217ENST00000584582 KIF3AQ9Y496 699 aa13.35□□□□□ -0.27
TOP3A-217ENST00000584582 ADORA1P30542 326 aa13.35□□□□□ -0.27
TOP3A-217ENST00000584582 NUP133Q8WUM0 1156 aa13.35□□□□□ -0.27
TOP3A-217ENST00000584582 NBPF26B4DH59 902 aa13.35□□□□□ -0.27
TOP3A-217ENST00000584582 BRD1O95696 1058 aa13.35□□□□□ -0.27
TOP3A-217ENST00000584582 ATP2B3Q16720 1220 aa13.35□□□□□ -0.27
TOP3A-217ENST00000584582 LRRFIP1Q32MZ4 808 aaKnown RBP13.35□□□□□ -0.27
TOP3A-217ENST00000584582 NBPF14Q5TI25 921 aa13.35□□□□□ -0.27
TOP3A-217ENST00000584582 NBPF10Q6P3W6 841 aaKnown RBP13.35□□□□□ -0.27
TOP3A-217ENST00000584582 SMIM5Q71RC9 77 aa13.35□□□□□ -0.27
TOP3A-217ENST00000584582 NBPF15Q8N660 670 aa13.35□□□□□ -0.27
TOP3A-217ENST00000584582 SH2B1Q9NRF2 756 aaPredicted RBP13.35□□□□□ -0.27
TOP3A-217ENST00000584582 LRP2BPQ9P2M1 347 aa13.35□□□□□ -0.27
TOP3A-217ENST00000584582 MINDY4BA8MYZ0 360 aa13.34□□□□□ -0.27
TOP3A-217ENST00000584582 GOLGA6L19H0YKK7 550 aa13.34□□□□□ -0.27
TOP3A-217ENST00000584582 ATP6V1AP38606 617 aa13.34□□□□□ -0.27
TOP3A-217ENST00000584582 IL15P40933 162 aaPredicted RBP13.34□□□□□ -0.27
TOP3A-217ENST00000584582 SLC9C2Q5TAH2 1124 aa13.34□□□□□ -0.27
TOP3A-217ENST00000584582 ISM2Q6H9L7 571 aa13.34□□□□□ -0.27
TOP3A-217ENST00000584582 CDC37L1Q7L3B6 337 aa13.34□□□□□ -0.27
TOP3A-217ENST00000584582 KAZALD1Q96I82 304 aa13.34□□□□□ -0.27
TOP3A-217ENST00000584582 ANKRD18BA2A2Z9 1011 aa13.34□□□□□ -0.27
TOP3A-217ENST00000584582 EYA2O00167 538 aa13.34□□□□□ -0.27
TOP3A-217ENST00000584582 DZIP3Q86Y13 1208 aaKnown RBP13.34□□□□□ -0.27
TOP3A-217ENST00000584582 TRIM5Q9C035 493 aa13.34□□□□□ -0.27
TOP3A-217ENST00000584582 IRS4O14654 1257 aaPredicted RBP13.34□□□□□ -0.27
TOP3A-217ENST00000584582 SYNE3Q6ZMZ3 975 aa13.34□□□□□ -0.27
TOP3A-217ENST00000584582 CCDC73Q6ZRK6 1079 aa13.34□□□□□ -0.27
TOP3A-217ENST00000584582 MICU3Q86XE3 530 aa13.34□□□□□ -0.27
TOP3A-217ENST00000584582 AIDAQ96BJ3 306 aa13.34□□□□□ -0.27
TOP3A-217ENST00000584582 U3KPZ7 1027 aaPredicted RBP13.34□□□□□ -0.27
TOP3A-217ENST00000584582 PXDNQ92626 1479 aa13.33□□□□□ -0.27
TOP3A-217ENST00000584582 CHAF1AQ13111 956 aaPredicted RBP13.33□□□□□ -0.28
TOP3A-217ENST00000584582 KRT32Q14532 448 aa13.33□□□□□ -0.28
TOP3A-217ENST00000584582 PDIA6Q15084 440 aa13.33□□□□□ -0.28
TOP3A-217ENST00000584582 ERCC4Q92889 916 aaPredicted RBP13.33□□□□□ -0.28
TOP3A-217ENST00000584582 AK9Q5TCS8 1911 aa13.33□□□□□ -0.28
TOP3A-217ENST00000584582 ITSN1Q15811 1721 aa13.33□□□□□ -0.28
TOP3A-217ENST00000584582 IMMTQ16891 758 aaKnown RBP13.33□□□□□ -0.28
TOP3A-217ENST00000584582 LRSAM1Q6UWE0 723 aa13.33□□□□□ -0.28
TOP3A-217ENST00000584582 ZNF592Q92610 1267 aa13.33□□□□□ -0.28
TOP3A-217ENST00000584582 NUP62CLQ9H1M0 184 aa13.33□□□□□ -0.28
TOP3A-217ENST00000584582 ITGA6P23229 1130 aa13.33□□□□□ -0.28
TOP3A-217ENST00000584582 ZAP70P43403 619 aa13.33□□□□□ -0.28
TOP3A-217ENST00000584582 RAI14Q9P0K7 980 aa13.33□□□□□ -0.28
TOP3A-217ENST00000584582 SSH2Q76I76 1423 aa13.32□□□□□ -0.28
TOP3A-217ENST00000584582 GOLGA8BA8MQT2 603 aa13.32□□□□□ -0.28
TOP3A-217ENST00000584582 TDO2P48775 406 aa13.32□□□□□ -0.28
TOP3A-217ENST00000584582 XAGE2Q96GT9 111 aa13.32□□□□□ -0.28
TOP3A-217ENST00000584582 INTS4Q96HW7 963 aaKnown RBP13.32□□□□□ -0.28
TOP3A-217ENST00000584582 NGLY1Q96IV0 654 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms