RNA–Protein interactions for RNA: ENST00000584014.5

ERBB2-216, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 849 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-216ENST00000584014 HSP90B1P14625 803 aaKnown RBP10.5□□□□□ -0.73
ERBB2-216ENST00000584014 SAMD1Q6SPF0 538 aaPredicted RBP10.5□□□□□ -0.73
ERBB2-216ENST00000584014 RBM17Q96I25 401 aaKnown RBP10.5□□□□□ -0.73
ERBB2-216ENST00000584014 PIM2Q9P1W9 311 aa10.5□□□□□ -0.73
ERBB2-216ENST00000584014 TNRC6CQ9HCJ0 1690 aaKnown RBP10.5□□□□□ -0.73
ERBB2-216ENST00000584014 NPR1P16066 1061 aa10.49□□□□□ -0.73
ERBB2-216ENST00000584014 IRX6P78412 446 aaPredicted RBP10.49□□□□□ -0.73
ERBB2-216ENST00000584014 DALRD3Q5D0E6 543 aaKnown RBP10.49□□□□□ -0.73
ERBB2-216ENST00000584014 SLC10A5Q5PT55 438 aa10.49□□□□□ -0.73
ERBB2-216ENST00000584014 C20orf194Q5TEA3 1177 aa10.49□□□□□ -0.73
ERBB2-216ENST00000584014 INTS3Q68E01 1043 aaKnown RBP10.49□□□□□ -0.73
ERBB2-216ENST00000584014 DDX46Q7L014 1031 aaKnown RBP10.49□□□□□ -0.73
ERBB2-216ENST00000584014 MASTLQ96GX5 879 aa10.49□□□□□ -0.73
ERBB2-216ENST00000584014 SUCLG2Q96I99 432 aa10.49□□□□□ -0.73
ERBB2-216ENST00000584014 USP44Q9H0E7 712 aa10.49□□□□□ -0.73
ERBB2-216ENST00000584014 ABCC4O15439 1325 aa10.49□□□□□ -0.73
ERBB2-216ENST00000584014 RNF123Q5XPI4 1314 aa10.49□□□□□ -0.73
ERBB2-216ENST00000584014 DDX60Q8IY21 1712 aaKnown RBP10.49□□□□□ -0.73
ERBB2-216ENST00000584014 IBTKQ9P2D0 1353 aaPredicted RBP10.49□□□□□ -0.73
ERBB2-216ENST00000584014 PXDNLA1KZ92 1463 aa10.49□□□□□ -0.73
ERBB2-216ENST00000584014 LAMB2P55268 1798 aa10.48□□□□□ -0.73
ERBB2-216ENST00000584014 ABCB7O75027 752 aa10.48□□□□□ -0.73
ERBB2-216ENST00000584014 SRGNP10124 158 aa10.48□□□□□ -0.73
ERBB2-216ENST00000584014 RRP1P56182 461 aaKnown RBP10.48□□□□□ -0.73
ERBB2-216ENST00000584014 CCDC152Q4G0S7 254 aa10.48□□□□□ -0.73
ERBB2-216ENST00000584014 TAF7LQ5H9L4 462 aa10.48□□□□□ -0.73
ERBB2-216ENST00000584014 TTLL6Q8N841 843 aa10.48□□□□□ -0.73
ERBB2-216ENST00000584014 MEIS3Q99687 375 aa10.48□□□□□ -0.73
ERBB2-216ENST00000584014 TMX4Q9H1E5 349 aaPredicted RBP10.48□□□□□ -0.73
ERBB2-216ENST00000584014 C1orf115Q9H7X2 142 aa10.48□□□□□ -0.73
ERBB2-216ENST00000584014 LRRFIP2Q9Y608 721 aaKnown RBP10.48□□□□□ -0.73
ERBB2-216ENST00000584014 TAF1P21675 1872 aa10.48□□□□□ -0.73
ERBB2-216ENST00000584014 KIF13BQ9NQT8 1826 aa10.47□□□□□ -0.73
ERBB2-216ENST00000584014 C21orf2O43822 256 aa10.47□□□□□ -0.73
ERBB2-216ENST00000584014 CENPBP07199 599 aaPredicted RBP10.47□□□□□ -0.73
ERBB2-216ENST00000584014 KCNA3P22001 575 aa10.47□□□□□ -0.73
ERBB2-216ENST00000584014 ALDH1B1P30837 517 aa10.47□□□□□ -0.73
ERBB2-216ENST00000584014 CTSWP56202 376 aa10.47□□□□□ -0.73
ERBB2-216ENST00000584014 TMEM132AQ24JP5 1023 aa10.47□□□□□ -0.73
ERBB2-216ENST00000584014 EPHA10Q5JZY3 1008 aa10.47□□□□□ -0.73
ERBB2-216ENST00000584014 STYK1Q6J9G0 422 aa10.47□□□□□ -0.73
ERBB2-216ENST00000584014 LMBR1LQ6UX01 489 aa10.47□□□□□ -0.73
ERBB2-216ENST00000584014 ARHGAP27Q6ZUM4 889 aa10.47□□□□□ -0.73
ERBB2-216ENST00000584014 CNKSR1Q969H4 720 aa10.47□□□□□ -0.73
ERBB2-216ENST00000584014 BICC1Q9H694 974 aaKnown RBP10.47□□□□□ -0.73
ERBB2-216ENST00000584014 GREM2Q9H772 168 aa10.47□□□□□ -0.73
ERBB2-216ENST00000584014 SEC31BQ9NQW1 1179 aa10.47□□□□□ -0.73
ERBB2-216ENST00000584014 PDZRN3Q9UPQ7 1066 aa10.47□□□□□ -0.73
ERBB2-216ENST00000584014 CDHR2Q9BYE9 1310 aa10.47□□□□□ -0.73
ERBB2-216ENST00000584014 COL11A2P13942 1736 aaPredicted RBP10.47□□□□□ -0.73
ERBB2-216ENST00000584014 PPEF1O14829 653 aaPredicted RBP10.46□□□□□ -0.73
ERBB2-216ENST00000584014 GNAI3P08754 354 aa10.46□□□□□ -0.73
ERBB2-216ENST00000584014 CASP7P55210 303 aa10.46□□□□□ -0.73
ERBB2-216ENST00000584014 FAM161AQ3B820 660 aa10.46□□□□□ -0.73
ERBB2-216ENST00000584014 PRPF40BQ6NWY9 871 aaKnown RBP10.46□□□□□ -0.73
ERBB2-216ENST00000584014 OLFM4Q6UX06 510 aa10.46□□□□□ -0.73
ERBB2-216ENST00000584014 TTLL11Q8NHH1 800 aa10.46□□□□□ -0.73
ERBB2-216ENST00000584014 MYH3P11055 1940 aa10.46□□□□□ -0.74
ERBB2-216ENST00000584014 GNAI2P04899 355 aa10.45□□□□□ -0.74
ERBB2-216ENST00000584014 YBX3P16989 372 aaKnown RBP eCLIP10.45□□□□□ -0.74
ERBB2-216ENST00000584014 ITGA6P23229 1130 aa10.45□□□□□ -0.74
ERBB2-216ENST00000584014 FOXO4P98177 505 aa10.45□□□□□ -0.74
ERBB2-216ENST00000584014 IFIT5Q13325 482 aaKnown RBP10.45□□□□□ -0.74
ERBB2-216ENST00000584014 MVPQ14764 893 aaKnown RBP10.45□□□□□ -0.74
ERBB2-216ENST00000584014 SF3B3Q15393 1217 aaKnown RBP10.45□□□□□ -0.74
ERBB2-216ENST00000584014 CCDC57Q2TAC2 916 aa10.45□□□□□ -0.74
ERBB2-216ENST00000584014 CELF1Q92879 486 aaKnown RBP10.45□□□□□ -0.74
ERBB2-216ENST00000584014 ZNF594Q96JF6 807 aaPredicted RBP10.45□□□□□ -0.74
ERBB2-216ENST00000584014 BCL11AQ9H165 835 aa10.45□□□□□ -0.74
ERBB2-216ENST00000584014 HDAC5Q9UQL6 1122 aa10.45□□□□□ -0.74
ERBB2-216ENST00000584014 SLX4Q8IY92 1834 aa10.44□□□□□ -0.74
ERBB2-216ENST00000584014 SPEF2Q9C093 1822 aa10.44□□□□□ -0.74
ERBB2-216ENST00000584014 KIAA1551Q9HCM1 1747 aa10.44□□□□□ -0.74
ERBB2-216ENST00000584014 ANKRD18BA2A2Z9 1011 aa10.44□□□□□ -0.74
ERBB2-216ENST00000584014 KLRG2A4D1S0 409 aaPredicted RBP10.44□□□□□ -0.74
ERBB2-216ENST00000584014 IGHMBP2P38935 993 aaKnown RBP10.44□□□□□ -0.74
ERBB2-216ENST00000584014 RPS8P62241 208 aaKnown RBP10.44□□□□□ -0.74
ERBB2-216ENST00000584014 GRAPQ13588 217 aa10.44□□□□□ -0.74
ERBB2-216ENST00000584014 PDE3AQ14432 1141 aa10.44□□□□□ -0.74
ERBB2-216ENST00000584014 CRY2Q49AN0 593 aa10.44□□□□□ -0.74
ERBB2-216ENST00000584014 SLC51AQ86UW1 340 aa10.44□□□□□ -0.74
ERBB2-216ENST00000584014 ANKRD18AQ8IVF6 992 aa10.44□□□□□ -0.74
ERBB2-216ENST00000584014 GRAPLQ8TC17 118 aaPredicted RBP10.44□□□□□ -0.74
ERBB2-216ENST00000584014 CRAMP1Q96RY5 1269 aa10.44□□□□□ -0.74
ERBB2-216ENST00000584014 CRBNQ96SW2 442 aa10.44□□□□□ -0.74
ERBB2-216ENST00000584014 CDC5LQ99459 802 aaKnown RBP10.44□□□□□ -0.74
ERBB2-216ENST00000584014 MPHOSPH8Q99549 860 aa10.44□□□□□ -0.74
ERBB2-216ENST00000584014 UTYO14607 1347 aa10.43□□□□□ -0.74
ERBB2-216ENST00000584014 ZBTB7BO15156 539 aaPredicted RBP10.43□□□□□ -0.74
ERBB2-216ENST00000584014 HOXA10P31260 410 aaPredicted RBP10.43□□□□□ -0.74
ERBB2-216ENST00000584014 KLHDC4Q8TBB5 520 aa10.43□□□□□ -0.74
ERBB2-216ENST00000584014 KAZALD1Q96I82 304 aa10.43□□□□□ -0.74
ERBB2-216ENST00000584014 PLA2G12BQ9BX93 195 aa10.43□□□□□ -0.74
ERBB2-216ENST00000584014 CNNM1Q9NRU3 951 aa10.43□□□□□ -0.74
ERBB2-216ENST00000584014 DDX19BQ9UMR2 479 aa10.43□□□□□ -0.74
ERBB2-216ENST00000584014 RIC1Q4ADV7 1423 aa10.42□□□□□ -0.74
ERBB2-216ENST00000584014 DLEC1Q9Y238 1755 aa10.42□□□□□ -0.74
ERBB2-216ENST00000584014 BBOX1O75936 387 aa10.42□□□□□ -0.74
ERBB2-216ENST00000584014 CSF1RP07333 972 aa10.42□□□□□ -0.74
ERBB2-216ENST00000584014 ANKRD44Q8N8A2 993 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms