RNA–Protein interactions for RNA: ENST00000583965.5

CDRT1-207, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDRT1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-207ENST00000583965 CSF1RP07333 972 aa14.57□□□□□ -0.08
CDRT1-207ENST00000583965 MTX1Q13505 466 aa14.57□□□□□ -0.08
CDRT1-207ENST00000583965 SF3B3Q15393 1217 aaKnown RBP14.57□□□□□ -0.08
CDRT1-207ENST00000583965 CCDC152Q4G0S7 254 aa14.57□□□□□ -0.08
CDRT1-207ENST00000583965 RPAP2Q8IXW5 612 aaPredicted RBP14.57□□□□□ -0.08
CDRT1-207ENST00000583965 ANKRD44Q8N8A2 993 aa14.57□□□□□ -0.08
CDRT1-207ENST00000583965 RTL9Q8NET4 1388 aa14.57□□□□□ -0.08
CDRT1-207ENST00000583965 CRY2Q49AN0 593 aa14.56□□□□□ -0.08
CDRT1-207ENST00000583965 EPHA10Q5JZY3 1008 aa14.56□□□□□ -0.08
CDRT1-207ENST00000583965 LMBR1LQ6UX01 489 aa14.56□□□□□ -0.08
CDRT1-207ENST00000583965 CCDC24Q8N4L8 307 aa14.56□□□□□ -0.08
CDRT1-207ENST00000583965 TTLL11Q8NHH1 800 aa14.56□□□□□ -0.08
CDRT1-207ENST00000583965 C1orf115Q9H7X2 142 aa14.56□□□□□ -0.08
CDRT1-207ENST00000583965 ATP8B2P98198 1209 aa14.55□□□□□ -0.08
CDRT1-207ENST00000583965 CEP85Q6P2H3 762 aa14.55□□□□□ -0.08
CDRT1-207ENST00000583965 HMMRO75330 724 aa14.54□□□□□ -0.08
CDRT1-207ENST00000583965 CD2APQ9Y5K6 639 aa14.54□□□□□ -0.08
CDRT1-207ENST00000583965 A0A1B0GUL6 1792 aa14.54□□□□□ -0.08
CDRT1-207ENST00000583965 SRGAP3O43295 1099 aa14.53□□□□□ -0.08
CDRT1-207ENST00000583965 TGFB2P61812 414 aa14.53□□□□□ -0.08
CDRT1-207ENST00000583965 IFIT5Q13325 482 aaKnown RBP14.53□□□□□ -0.08
CDRT1-207ENST00000583965 CCDC57Q2TAC2 916 aa14.53□□□□□ -0.08
CDRT1-207ENST00000583965 C3orf67Q6ZVT6 689 aa14.53□□□□□ -0.08
CDRT1-207ENST00000583965 SSH3Q8TE77 659 aa14.53□□□□□ -0.08
CDRT1-207ENST00000583965 RPGRQ92834 1020 aaKnown RBP14.53□□□□□ -0.08
CDRT1-207ENST00000583965 GREM2Q9H772 168 aa14.53□□□□□ -0.08
CDRT1-207ENST00000583965 CHMP3Q9Y3E7 222 aa14.53□□□□□ -0.08
CDRT1-207ENST00000583965 PCDHB15Q9Y5E8 787 aa14.53□□□□□ -0.08
CDRT1-207ENST00000583965 ARFGEF1Q9Y6D6 1849 aa14.52□□□□□ -0.08
CDRT1-207ENST00000583965 ANKRD18BA2A2Z9 1011 aa14.52□□□□□ -0.09
CDRT1-207ENST00000583965 H0YIN7 160 aa14.52□□□□□ -0.09
CDRT1-207ENST00000583965 SRGNP10124 158 aa14.52□□□□□ -0.09
CDRT1-207ENST00000583965 NPR1P16066 1061 aa14.52□□□□□ -0.09
CDRT1-207ENST00000583965 ITGA6P23229 1130 aa14.52□□□□□ -0.09
CDRT1-207ENST00000583965 HOXA10P31260 410 aaPredicted RBP14.52□□□□□ -0.09
CDRT1-207ENST00000583965 POLA2Q14181 598 aa14.52□□□□□ -0.09
CDRT1-207ENST00000583965 FAM161AQ3B820 660 aa14.52□□□□□ -0.09
CDRT1-207ENST00000583965 DDX46Q7L014 1031 aaKnown RBP14.52□□□□□ -0.09
CDRT1-207ENST00000583965 MASTLQ96GX5 879 aa14.52□□□□□ -0.09
CDRT1-207ENST00000583965 RBM17Q96I25 401 aaKnown RBP14.52□□□□□ -0.09
CDRT1-207ENST00000583965 CDC5LQ99459 802 aaKnown RBP14.52□□□□□ -0.09
CDRT1-207ENST00000583965 SLX4Q8IY92 1834 aa14.52□□□□□ -0.09
CDRT1-207ENST00000583965 PNMA6EA0A0J9YXQ4 647 aa14.51□□□□□ -0.09
CDRT1-207ENST00000583965 STYK1Q6J9G0 422 aa14.51□□□□□ -0.09
CDRT1-207ENST00000583965 C2CD5Q86YS7 1000 aa14.51□□□□□ -0.09
CDRT1-207ENST00000583965 SIRT2Q8IXJ6 389 aa14.51□□□□□ -0.09
CDRT1-207ENST00000583965 CRAMP1Q96RY5 1269 aa14.51□□□□□ -0.09
CDRT1-207ENST00000583965 LRRC37AA6NMS7 1700 aa14.51□□□□□ -0.09
CDRT1-207ENST00000583965 ALDH1B1P30837 517 aa14.5□□□□□ -0.09
CDRT1-207ENST00000583965 HDAC1Q13547 482 aaPredicted RBP14.5□□□□□ -0.09
CDRT1-207ENST00000583965 TAF7LQ5H9L4 462 aa14.5□□□□□ -0.09
CDRT1-207ENST00000583965 CCDC85AQ96PX6 553 aaPredicted RBP14.5□□□□□ -0.09
CDRT1-207ENST00000583965 PPP1R1BQ9UD71 204 aaPredicted RBP14.5□□□□□ -0.09
CDRT1-207ENST00000583965 FBXO3Q9UK99 471 aa14.5□□□□□ -0.09
CDRT1-207ENST00000583965 RFX5P48382 616 aaPredicted RBP14.49□□□□□ -0.09
CDRT1-207ENST00000583965 GRAPQ13588 217 aa14.49□□□□□ -0.09
CDRT1-207ENST00000583965 TMC4Q7Z404 712 aa14.49□□□□□ -0.09
CDRT1-207ENST00000583965 ANKRD18AQ8IVF6 992 aa14.49□□□□□ -0.09
CDRT1-207ENST00000583965 GRAPLQ8TC17 118 aaPredicted RBP14.49□□□□□ -0.09
CDRT1-207ENST00000583965 CNKSR1Q969H4 720 aa14.49□□□□□ -0.09
CDRT1-207ENST00000583965 RWDD1Q9H446 243 aaPredicted RBP14.49□□□□□ -0.09
CDRT1-207ENST00000583965 COPRSQ9NQ92 184 aa14.49□□□□□ -0.09
CDRT1-207ENST00000583965 SEC31BQ9NQW1 1179 aa14.49□□□□□ -0.09
CDRT1-207ENST00000583965 IGHMBP2P38935 993 aaKnown RBP14.48□□□□□ -0.09
CDRT1-207ENST00000583965 RPS8P62241 208 aaKnown RBP14.48□□□□□ -0.09
CDRT1-207ENST00000583965 PTPN12Q05209 780 aaKnown RBP14.48□□□□□ -0.09
CDRT1-207ENST00000583965 HSP90AB4PQ58FF6 505 aa14.48□□□□□ -0.09
CDRT1-207ENST00000583965 PPP4R2Q9NY27 417 aa14.48□□□□□ -0.09
CDRT1-207ENST00000583965 COL4A1P02462 1669 aa14.48□□□□□ -0.09
CDRT1-207ENST00000583965 BBOX1O75936 387 aa14.47□□□□□ -0.09
CDRT1-207ENST00000583965 DPEP1P16444 411 aa14.47□□□□□ -0.09
CDRT1-207ENST00000583965 CHRNA5P30532 468 aa14.47□□□□□ -0.09
CDRT1-207ENST00000583965 ZNF622Q969S3 477 aaKnown RBP eCLIP14.47□□□□□ -0.09
CDRT1-207ENST00000583965 MPHOSPH8Q99549 860 aa14.47□□□□□ -0.09
CDRT1-207ENST00000583965 NOP58Q9Y2X3 529 aaKnown RBP14.47□□□□□ -0.09
CDRT1-207ENST00000583965 SRCAPQ6ZRS2 3230 aa14.47□□□□□ -0.09
CDRT1-207ENST00000583965 CIAO1O76071 339 aa14.46□□□□□ -0.09
CDRT1-207ENST00000583965 KCNA3P22001 575 aa14.46□□□□□ -0.09
CDRT1-207ENST00000583965 LDHAL6AQ6ZMR3 332 aa14.46□□□□□ -0.09
CDRT1-207ENST00000583965 KLHL34Q8N239 644 aa14.46□□□□□ -0.09
CDRT1-207ENST00000583965 CELF1Q92879 486 aaKnown RBP14.46□□□□□ -0.09
CDRT1-207ENST00000583965 FHDC1Q9C0D6 1143 aaPredicted RBP14.46□□□□□ -0.09
CDRT1-207ENST00000583965 BSDC1Q9NW68 430 aaPredicted RBP14.46□□□□□ -0.09
CDRT1-207ENST00000583965 A0A0G2JLW4 131 aa14.45□□□□□ -0.1
CDRT1-207ENST00000583965 EYA2O00167 538 aa14.45□□□□□ -0.1
CDRT1-207ENST00000583965 SURF6O75683 361 aaKnown RBP14.45□□□□□ -0.1
CDRT1-207ENST00000583965 G3BP1Q13283 466 aaKnown RBP eCLIP14.45□□□□□ -0.1
CDRT1-207ENST00000583965 LTBP1Q14766 1721 aa14.45□□□□□ -0.1
CDRT1-207ENST00000583965 FER1L6Q2WGJ9 1857 aa14.45□□□□□ -0.1
CDRT1-207ENST00000583965 TTLL6Q8N841 843 aa14.45□□□□□ -0.1
CDRT1-207ENST00000583965 GCC1Q96CN9 775 aa14.45□□□□□ -0.1
CDRT1-207ENST00000583965 ZNF594Q96JF6 807 aaPredicted RBP14.45□□□□□ -0.1
CDRT1-207ENST00000583965 CCDC136Q96JN2 1154 aa14.45□□□□□ -0.1
CDRT1-207ENST00000583965 DCTPP1Q9H773 170 aa14.45□□□□□ -0.1
CDRT1-207ENST00000583965 PIM2Q9P1W9 311 aa14.45□□□□□ -0.1
CDRT1-207ENST00000583965 PA2G4Q9UQ80 394 aaKnown RBP14.45□□□□□ -0.1
CDRT1-207ENST00000583965 ARAP2Q8WZ64 1704 aa14.44□□□□□ -0.1
CDRT1-207ENST00000583965 PPEF1O14829 653 aaPredicted RBP14.44□□□□□ -0.1
CDRT1-207ENST00000583965 RAB11FIP3O75154 756 aa14.44□□□□□ -0.1
CDRT1-207ENST00000583965 IL15P40933 162 aaPredicted RBP14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms