RNA–Protein interactions for RNA: ENST00000583741.1

SRSF1-206, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5

Gene SRSF1, Length 1,465 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-206ENST00000583741 LRRC37AA6NMS7 1700 aa26.78■■□□□ 1.88
SRSF1-206ENST00000583741 TMPOP42166 694 aaKnown RBP26.77■■□□□ 1.88
SRSF1-206ENST00000583741 SP8Q8IXZ3 490 aa26.77■■□□□ 1.88
SRSF1-206ENST00000583741 SUPT20HQ8NEM7 779 aa26.77■■□□□ 1.88
SRSF1-206ENST00000583741 DDX60Q8IY21 1712 aaKnown RBP26.77■■□□□ 1.88
SRSF1-206ENST00000583741 BBOX1O75936 387 aa26.76■■□□□ 1.87
SRSF1-206ENST00000583741 RALBP1Q15311 655 aa26.76■■□□□ 1.87
SRSF1-206ENST00000583741 TLL2Q9Y6L7 1015 aa26.76■■□□□ 1.87
SRSF1-206ENST00000583741 ECE1P42892 770 aa26.75■■□□□ 1.87
SRSF1-206ENST00000583741 KIAA2012Q0VF49 1180 aa26.75■■□□□ 1.87
SRSF1-206ENST00000583741 KRT24Q2M2I5 525 aa26.75■■□□□ 1.87
SRSF1-206ENST00000583741 HSP90AB3PQ58FF7 597 aa26.75■■□□□ 1.87
SRSF1-206ENST00000583741 MPNDQ8N594 471 aa26.75■■□□□ 1.87
SRSF1-206ENST00000583741 GPR101Q96P66 508 aaPredicted RBP26.75■■□□□ 1.87
SRSF1-206ENST00000583741 TCIRG1Q13488 830 aa26.74■■□□□ 1.87
SRSF1-206ENST00000583741 ZNF428Q96B54 188 aa26.74■■□□□ 1.87
SRSF1-206ENST00000583741 TRMT112Q9UI30 125 aaKnown RBP26.74■■□□□ 1.87
SRSF1-206ENST00000583741 SH3TC1Q8TE82 1336 aa26.74■■□□□ 1.87
SRSF1-206ENST00000583741 CIAPIN1Q6FI81 312 aa26.74■■□□□ 1.87
SRSF1-206ENST00000583741 ABHD8Q96I13 439 aa26.74■■□□□ 1.87
SRSF1-206ENST00000583741 RAD17O75943 681 aa26.73■■□□□ 1.87
SRSF1-206ENST00000583741 LMOD3Q0VAK6 560 aa26.73■■□□□ 1.87
SRSF1-206ENST00000583741 GRAPQ13588 217 aa26.73■■□□□ 1.87
SRSF1-206ENST00000583741 DDX46Q7L014 1031 aaKnown RBP26.73■■□□□ 1.87
SRSF1-206ENST00000583741 GRAPLQ8TC17 118 aaPredicted RBP26.73■■□□□ 1.87
SRSF1-206ENST00000583741 GLIS2Q9BZE0 524 aaPredicted RBP26.73■■□□□ 1.87
SRSF1-206ENST00000583741 YDJCA8MPS7 323 aa26.71■■□□□ 1.87
SRSF1-206ENST00000583741 AOC2O75106 756 aa26.71■■□□□ 1.87
SRSF1-206ENST00000583741 CELF2O95319 508 aaKnown RBP26.71■■□□□ 1.87
SRSF1-206ENST00000583741 HIRAP54198 1017 aaPredicted RBP26.71■■□□□ 1.87
SRSF1-206ENST00000583741 SAPCD2Q86UD0 394 aa26.71■■□□□ 1.87
SRSF1-206ENST00000583741 PGAP2Q9UHJ9 254 aa26.71■■□□□ 1.87
SRSF1-206ENST00000583741 CDHR2Q9BYE9 1310 aa26.71■■□□□ 1.87
SRSF1-206ENST00000583741 COL4A1P02462 1669 aa26.71■■□□□ 1.87
SRSF1-206ENST00000583741 CCER2I3L3R5 266 aa26.7■■□□□ 1.87
SRSF1-206ENST00000583741 CCDC146Q8IYE0 955 aa26.7■■□□□ 1.87
SRSF1-206ENST00000583741 BCL2L13Q9BXK5 485 aa26.7■■□□□ 1.87
SRSF1-206ENST00000583741 CHPF2Q9P2E5 772 aa26.7■■□□□ 1.87
SRSF1-206ENST00000583741 SHTN1A0MZ66 631 aa26.69■■□□□ 1.86
SRSF1-206ENST00000583741 NEUROD2Q15784 382 aa26.69■■□□□ 1.86
SRSF1-206ENST00000583741 TRPM4Q8TD43 1214 aa26.69■■□□□ 1.86
SRSF1-206ENST00000583741 BEGAINQ9BUH8 593 aa26.69■■□□□ 1.86
SRSF1-206ENST00000583741 TSKSQ9UJT2 592 aa26.69■■□□□ 1.86
SRSF1-206ENST00000583741 CHL1O00533 1208 aa26.68■■□□□ 1.86
SRSF1-206ENST00000583741 MYBBP1AQ9BQG0 1328 aaKnown RBP26.68■■□□□ 1.86
SRSF1-206ENST00000583741 TNIP1Q15025 636 aa26.68■■□□□ 1.86
SRSF1-206ENST00000583741 MAP2K2P36507 400 aa26.67■■□□□ 1.86
SRSF1-206ENST00000583741 ZC3H15Q8WU90 426 aaKnown RBP26.66■■□□□ 1.86
SRSF1-206ENST00000583741 CNOT7Q9UIV1 285 aaKnown RBP26.66■■□□□ 1.86
SRSF1-206ENST00000583741 TRIM35Q9UPQ4 493 aa26.66■■□□□ 1.86
SRSF1-206ENST00000583741 LAS1LQ9Y4W2 734 aaKnown RBP26.66■■□□□ 1.86
SRSF1-206ENST00000583741 TMC4Q7Z404 712 aa26.65■■□□□ 1.86
SRSF1-206ENST00000583741 ZNF408Q9H9D4 720 aa26.65■■□□□ 1.86
SRSF1-206ENST00000583741 PLBD2Q8NHP8 589 aa26.64■■□□□ 1.86
SRSF1-206ENST00000583741 CELF1Q92879 486 aaKnown RBP26.64■■□□□ 1.86
SRSF1-206ENST00000583741 ZBTB12Q9Y330 459 aaPredicted RBP26.64■■□□□ 1.86
SRSF1-206ENST00000583741 HDGFL1Q5TGJ6 251 aa26.63■■□□□ 1.85
SRSF1-206ENST00000583741 MICALL2Q8IY33 904 aa26.63■■□□□ 1.85
SRSF1-206ENST00000583741 FAM89AQ96GI7 184 aa26.63■■□□□ 1.85
SRSF1-206ENST00000583741 HHIPL1Q96JK4 782 aa26.63■■□□□ 1.85
SRSF1-206ENST00000583741 ISCA1Q9BUE6 129 aa26.63■■□□□ 1.85
SRSF1-206ENST00000583741 ATP5J2-PTCD1G3V325 749 aa26.62■■□□□ 1.85
SRSF1-206ENST00000583741 CDC37L1Q7L3B6 337 aa26.62■■□□□ 1.85
SRSF1-206ENST00000583741 DLK2Q6UY11 383 aa26.62■■□□□ 1.85
SRSF1-206ENST00000583741 ANKRD13DQ6ZTN6 518 aa26.62■■□□□ 1.85
SRSF1-206ENST00000583741 DBNDD1Q9H9R9 158 aa26.62■■□□□ 1.85
SRSF1-206ENST00000583741 NSFL1CQ9UNZ2 370 aaKnown RBP26.62■■□□□ 1.85
SRSF1-206ENST00000583741 CASP8AP2Q9UKL3 1982 aa26.61■■□□□ 1.85
SRSF1-206ENST00000583741 POLR2AP24928 1970 aaKnown RBP26.61■■□□□ 1.85
SRSF1-206ENST00000583741 PSMD14O00487 310 aa26.61■■□□□ 1.85
SRSF1-206ENST00000583741 SF3B3Q15393 1217 aaKnown RBP26.61■■□□□ 1.85
SRSF1-206ENST00000583741 WASHC4Q2M389 1173 aa26.61■■□□□ 1.85
SRSF1-206ENST00000583741 H7C1D1 291 aa26.6■■□□□ 1.85
SRSF1-206ENST00000583741 SAMD7Q7Z3H4 446 aa26.6■■□□□ 1.85
SRSF1-206ENST00000583741 POLLQ9UGP5 575 aa26.6■■□□□ 1.85
SRSF1-206ENST00000583741 RIMBP2O15034 1052 aa26.59■■□□□ 1.85
SRSF1-206ENST00000583741 EGFRP00533 1210 aa26.59■■□□□ 1.85
SRSF1-206ENST00000583741 HOXB7P09629 217 aa26.59■■□□□ 1.85
SRSF1-206ENST00000583741 BRPF1P55201 1214 aaPredicted RBP26.59■■□□□ 1.85
SRSF1-206ENST00000583741 FAM161AQ3B820 660 aa26.59■■□□□ 1.85
SRSF1-206ENST00000583741 RTL5Q5HYW3 569 aaPredicted RBP26.59■■□□□ 1.85
SRSF1-206ENST00000583741 USP48Q86UV5 1035 aa26.59■■□□□ 1.85
SRSF1-206ENST00000583741 RUNDC1Q96C34 613 aa26.59■■□□□ 1.85
SRSF1-206ENST00000583741 DBF4Q9UBU7 674 aaPredicted RBP26.59■■□□□ 1.85
SRSF1-206ENST00000583741 SCN9AQ15858 1988 aa26.58■■□□□ 1.85
SRSF1-206ENST00000583741 GPSM2P81274 684 aa26.58■■□□□ 1.85
SRSF1-206ENST00000583741 DPF2Q92785 391 aa26.58■■□□□ 1.85
SRSF1-206ENST00000583741 ZIC5Q96T25 663 aa26.57■■□□□ 1.84
SRSF1-206ENST00000583741 KCNQ5Q9NR82 932 aa26.57■■□□□ 1.84
SRSF1-206ENST00000583741 RTL9Q8NET4 1388 aa26.57■■□□□ 1.84
SRSF1-206ENST00000583741 CCDC85CA6NKD9 419 aa26.56■■□□□ 1.84
SRSF1-206ENST00000583741 C6orf229H3BNL8 230 aa26.56■■□□□ 1.84
SRSF1-206ENST00000583741 CA12O43570 354 aa26.56■■□□□ 1.84
SRSF1-206ENST00000583741 TBC1D10BQ4KMP7 808 aaPredicted RBP26.56■■□□□ 1.84
SRSF1-206ENST00000583741 MRS2Q9HD23 443 aa26.56■■□□□ 1.84
SRSF1-206ENST00000583741 CCDC184Q52MB2 194 aa26.55■■□□□ 1.84
SRSF1-206ENST00000583741 ECE2O60344 883 aa26.55■■□□□ 1.84
SRSF1-206ENST00000583741 HUNKP57058 714 aa26.55■■□□□ 1.84
SRSF1-206ENST00000583741 DOK7Q18PE1 504 aa26.55■■□□□ 1.84
SRSF1-206ENST00000583741 DUSP27Q5VZP5 1158 aa26.55■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms