RNA–Protein interactions for RNA: ENST00000583438.1

PPP4R1-225, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-225ENST00000583438 POLKQ9UBT6 870 aa11□□□□□ -0.65
PPP4R1-225ENST00000583438 PHKG2P15735 406 aa10.99□□□□□ -0.65
PPP4R1-225ENST00000583438 TMF1P82094 1093 aa10.99□□□□□ -0.65
PPP4R1-225ENST00000583438 QPCTQ16769 361 aa10.99□□□□□ -0.65
PPP4R1-225ENST00000583438 PRR14Q9BWN1 585 aa10.99□□□□□ -0.65
PPP4R1-225ENST00000583438 WASHC2AQ641Q2 1341 aa10.99□□□□□ -0.65
PPP4R1-225ENST00000583438 NRXN2Q9P2S2 1712 aa10.98□□□□□ -0.65
PPP4R1-225ENST00000583438 GRIN3BO60391 1043 aa10.98□□□□□ -0.65
PPP4R1-225ENST00000583438 PTPN5P54829 565 aa10.98□□□□□ -0.65
PPP4R1-225ENST00000583438 EIF4A2Q14240 407 aaKnown RBP10.98□□□□□ -0.65
PPP4R1-225ENST00000583438 GRIPAP1Q4V328 841 aa10.98□□□□□ -0.65
PPP4R1-225ENST00000583438 MORN1Q5T089 497 aa10.98□□□□□ -0.65
PPP4R1-225ENST00000583438 SPNS2Q8IVW8 549 aa10.98□□□□□ -0.65
PPP4R1-225ENST00000583438 UBR2Q8IWV8 1755 aa10.98□□□□□ -0.65
PPP4R1-225ENST00000583438 ANKRD31Q8N7Z5 1873 aa10.98□□□□□ -0.65
PPP4R1-225ENST00000583438 LILRB3O75022 631 aa10.97□□□□□ -0.65
PPP4R1-225ENST00000583438 COL11A2P13942 1736 aaPredicted RBP10.96□□□□□ -0.65
PPP4R1-225ENST00000583438 PPM1GO15355 546 aaPredicted RBP10.96□□□□□ -0.65
PPP4R1-225ENST00000583438 SSFA2P28290 1259 aa10.96□□□□□ -0.65
PPP4R1-225ENST00000583438 IFFO2Q5TF58 517 aa10.96□□□□□ -0.65
PPP4R1-225ENST00000583438 AEBP1Q8IUX7 1158 aa10.96□□□□□ -0.65
PPP4R1-225ENST00000583438 SLC27A5Q9Y2P5 690 aa10.96□□□□□ -0.65
PPP4R1-225ENST00000583438 CACNA1SQ13698 1873 aa10.95□□□□□ -0.66
PPP4R1-225ENST00000583438 SIPA1L3O60292 1781 aaPredicted RBP10.95□□□□□ -0.66
PPP4R1-225ENST00000583438 TIAM2Q8IVF5 1701 aa10.95□□□□□ -0.66
PPP4R1-225ENST00000583438 MMP10P09238 476 aa10.95□□□□□ -0.66
PPP4R1-225ENST00000583438 RTL5Q5HYW3 569 aaPredicted RBP10.95□□□□□ -0.66
PPP4R1-225ENST00000583438 PPP2R2DQ66LE6 453 aa10.95□□□□□ -0.66
PPP4R1-225ENST00000583438 PCDHB3Q9Y5E6 796 aa10.95□□□□□ -0.66
PPP4R1-225ENST00000583438 HSPA6P17066 643 aa10.94□□□□□ -0.66
PPP4R1-225ENST00000583438 KCNA3P22001 575 aa10.94□□□□□ -0.66
PPP4R1-225ENST00000583438 RFC5P40937 340 aa10.94□□□□□ -0.66
PPP4R1-225ENST00000583438 TNNT2P45379 298 aaPredicted RBP10.94□□□□□ -0.66
PPP4R1-225ENST00000583438 PRPF38BQ5VTL8 546 aaKnown RBP10.94□□□□□ -0.66
PPP4R1-225ENST00000583438 SMARCC1Q92922 1105 aaPredicted RBP10.94□□□□□ -0.66
PPP4R1-225ENST00000583438 TMOD3Q9NYL9 352 aa10.94□□□□□ -0.66
PPP4R1-225ENST00000583438 KCPQ6ZWJ8 1503 aa10.94□□□□□ -0.66
PPP4R1-225ENST00000583438 PCNTO95613 3336 aa10.93□□□□□ -0.66
PPP4R1-225ENST00000583438 TNRC6CQ9HCJ0 1690 aaKnown RBP10.93□□□□□ -0.66
PPP4R1-225ENST00000583438 A0A0G2JLW4 131 aa10.93□□□□□ -0.66
PPP4R1-225ENST00000583438 GYS1P13807 737 aa10.93□□□□□ -0.66
PPP4R1-225ENST00000583438 BLOC1S3Q6QNY0 202 aa10.93□□□□□ -0.66
PPP4R1-225ENST00000583438 FLAD1Q8NFF5 587 aa10.93□□□□□ -0.66
PPP4R1-225ENST00000583438 SYMPKQ92797 1274 aaKnown RBP10.93□□□□□ -0.66
PPP4R1-225ENST00000583438 SRP68Q9UHB9 627 aaKnown RBP10.93□□□□□ -0.66
PPP4R1-225ENST00000583438 MRC1P22897 1456 aa10.93□□□□□ -0.66
PPP4R1-225ENST00000583438 DDR1Q08345 913 aa10.92□□□□□ -0.66
PPP4R1-225ENST00000583438 ZBTB3Q9H5J0 574 aa10.92□□□□□ -0.66
PPP4R1-225ENST00000583438 NMRK2Q9NPI5 230 aa10.92□□□□□ -0.66
PPP4R1-225ENST00000583438 SPG7Q9UQ90 795 aa10.92□□□□□ -0.66
PPP4R1-225ENST00000583438 CNTNAP4Q9C0A0 1308 aa10.91□□□□□ -0.66
PPP4R1-225ENST00000583438 DPEP1P16444 411 aa10.91□□□□□ -0.66
PPP4R1-225ENST00000583438 PRELPP51888 382 aa10.91□□□□□ -0.66
PPP4R1-225ENST00000583438 HTRA3P83110 453 aa10.91□□□□□ -0.66
PPP4R1-225ENST00000583438 MTMR2Q13614 643 aa10.91□□□□□ -0.66
PPP4R1-225ENST00000583438 NYAP1Q6ZVC0 841 aa10.91□□□□□ -0.66
PPP4R1-225ENST00000583438 SCUBE3Q8IX30 993 aa10.91□□□□□ -0.66
PPP4R1-225ENST00000583438 IFNL2Q8IZJ0 200 aa10.91□□□□□ -0.66
PPP4R1-225ENST00000583438 RNF166Q96A37 237 aaPredicted RBP10.91□□□□□ -0.66
PPP4R1-225ENST00000583438 SCN7AQ01118 1682 aa10.91□□□□□ -0.66
PPP4R1-225ENST00000583438 C6orf229H3BNL8 230 aa10.9□□□□□ -0.66
PPP4R1-225ENST00000583438 COPS2P61201 443 aa10.9□□□□□ -0.66
PPP4R1-225ENST00000583438 RNF19BQ6ZMZ0 732 aa10.9□□□□□ -0.66
PPP4R1-225ENST00000583438 DNAJC5GQ8N7S2 189 aa10.9□□□□□ -0.66
PPP4R1-225ENST00000583438 DICER1Q9UPY3 1922 aaKnown RBP10.9□□□□□ -0.67
PPP4R1-225ENST00000583438 TIMELESSQ9UNS1 1208 aa10.89□□□□□ -0.67
PPP4R1-225ENST00000583438 FER1L6Q2WGJ9 1857 aa10.89□□□□□ -0.67
PPP4R1-225ENST00000583438 CARMIL3Q8ND23 1372 aa10.89□□□□□ -0.67
PPP4R1-225ENST00000583438 BCORQ6W2J9 1755 aa10.88□□□□□ -0.67
PPP4R1-225ENST00000583438 NR1I2O75469 434 aa10.88□□□□□ -0.67
PPP4R1-225ENST00000583438 BCS1LQ9Y276 419 aa10.88□□□□□ -0.67
PPP4R1-225ENST00000583438 PLEKHG2Q9H7P9 1386 aa10.88□□□□□ -0.67
PPP4R1-225ENST00000583438 RPS6KA4O75676 772 aa10.87□□□□□ -0.67
PPP4R1-225ENST00000583438 CHRNA5P30532 468 aa10.87□□□□□ -0.67
PPP4R1-225ENST00000583438 CRKLP46109 303 aaKnown RBP10.87□□□□□ -0.67
PPP4R1-225ENST00000583438 Q3C1V9 767 aa10.87□□□□□ -0.67
PPP4R1-225ENST00000583438 ZNF530Q6P9A1 599 aaPredicted RBP10.87□□□□□ -0.67
PPP4R1-225ENST00000583438 INTS5Q6P9B9 1019 aaKnown RBP10.87□□□□□ -0.67
PPP4R1-225ENST00000583438 BRICD5Q6PL45 260 aa10.87□□□□□ -0.67
PPP4R1-225ENST00000583438 THAP11Q96EK4 314 aa10.87□□□□□ -0.67
PPP4R1-225ENST00000583438 ARFGEF2Q9Y6D5 1785 aa10.87□□□□□ -0.67
PPP4R1-225ENST00000583438 COL3A1P02461 1466 aaPredicted RBP10.87□□□□□ -0.67
PPP4R1-225ENST00000583438 USP42Q9H9J4 1324 aaKnown RBP10.86□□□□□ -0.67
PPP4R1-225ENST00000583438 ERVV-2B6SEH9 535 aa10.86□□□□□ -0.67
PPP4R1-225ENST00000583438 CFAP99D6REC4 459 aa10.86□□□□□ -0.67
PPP4R1-225ENST00000583438 PTCD1O75127 700 aaKnown RBP10.86□□□□□ -0.67
PPP4R1-225ENST00000583438 TRAPPC3LQ5T215 181 aa10.86□□□□□ -0.67
PPP4R1-225ENST00000583438 RC3H1Q5TC82 1133 aaKnown RBP10.86□□□□□ -0.67
PPP4R1-225ENST00000583438 MTRQ99707 1265 aa10.86□□□□□ -0.67
PPP4R1-225ENST00000583438 POLR3GLQ9BT43 218 aa10.86□□□□□ -0.67
PPP4R1-225ENST00000583438 PANK3Q9H999 370 aa10.86□□□□□ -0.67
PPP4R1-225ENST00000583438 RTCBQ9Y3I0 505 aaKnown RBP10.86□□□□□ -0.67
PPP4R1-225ENST00000583438 SPDYE5A6NIY4 337 aa10.85□□□□□ -0.67
PPP4R1-225ENST00000583438 HSPA5P11021 654 aaKnown RBP10.85□□□□□ -0.67
PPP4R1-225ENST00000583438 IL13P35225 146 aa10.85□□□□□ -0.67
PPP4R1-225ENST00000583438 TGFB2P61812 414 aa10.85□□□□□ -0.67
PPP4R1-225ENST00000583438 TMEM259Q4ZIN3 620 aa10.85□□□□□ -0.67
PPP4R1-225ENST00000583438 CDCA8Q53HL2 280 aa10.85□□□□□ -0.67
PPP4R1-225ENST00000583438 TJAP1Q5JTD0 557 aa10.85□□□□□ -0.67
PPP4R1-225ENST00000583438 NFATC2IPQ8NCF5 419 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms