RNA–Protein interactions for RNA: ENST00000583344.1

SMCHD1-208, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 738 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-208ENST00000583344 RARAP10276 462 aa8.8□□□□□ -1
SMCHD1-208ENST00000583344 PLAURQ03405 335 aa8.8□□□□□ -1
SMCHD1-208ENST00000583344 COX20Q5RI15 118 aa8.8□□□□□ -1
SMCHD1-208ENST00000583344 DHX32Q7L7V1 743 aaKnown RBP8.8□□□□□ -1
SMCHD1-208ENST00000583344 MAP3K6O95382 1288 aa8.79□□□□□ -1
SMCHD1-208ENST00000583344 FAM69CQ0P6D2 419 aa8.79□□□□□ -1
SMCHD1-208ENST00000583344 OCLNQ16625 522 aa8.79□□□□□ -1
SMCHD1-208ENST00000583344 SWI5Q1ZZU3 235 aa8.79□□□□□ -1
SMCHD1-208ENST00000583344 XP32Q5T750 250 aa8.79□□□□□ -1
SMCHD1-208ENST00000583344 TREML1Q86YW5 311 aa8.79□□□□□ -1
SMCHD1-208ENST00000583344 RGL4Q8IZJ4 473 aa8.79□□□□□ -1
SMCHD1-208ENST00000583344 NACC1Q96RE7 527 aa8.79□□□□□ -1
SMCHD1-208ENST00000583344 LPIN3Q9BQK8 851 aa8.79□□□□□ -1
SMCHD1-208ENST00000583344 RTCBQ9Y3I0 505 aaKnown RBP8.79□□□□□ -1
SMCHD1-208ENST00000583344 SELPP16109 830 aa8.78□□□□□ -1
SMCHD1-208ENST00000583344 RSPO4Q2I0M5 234 aaPredicted RBP8.78□□□□□ -1
SMCHD1-208ENST00000583344 PERM1Q5SV97 790 aa8.78□□□□□ -1
SMCHD1-208ENST00000583344 SHISA2Q6UWI4 295 aa8.78□□□□□ -1
SMCHD1-208ENST00000583344 DMRTC2Q8IXT2 367 aaPredicted RBP8.78□□□□□ -1
SMCHD1-208ENST00000583344 SAP130Q9H0E3 1048 aa8.78□□□□□ -1
SMCHD1-208ENST00000583344 ELNP15502 786 aa8.77□□□□□ -1.01
SMCHD1-208ENST00000583344 RAC1P63000 192 aa8.77□□□□□ -1.01
SMCHD1-208ENST00000583344 SRPK2P78362 688 aaKnown RBP8.77□□□□□ -1.01
SMCHD1-208ENST00000583344 CAPN12Q6ZSI9 719 aa8.77□□□□□ -1.01
SMCHD1-208ENST00000583344 HFE2Q6ZVN8 426 aa8.77□□□□□ -1.01
SMCHD1-208ENST00000583344 CMTR1Q8N1G2 835 aaKnown RBP8.77□□□□□ -1.01
SMCHD1-208ENST00000583344 TRPM4Q8TD43 1214 aa8.77□□□□□ -1.01
SMCHD1-208ENST00000583344 MKNK1Q9BUB5 465 aa8.77□□□□□ -1.01
SMCHD1-208ENST00000583344 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.77□□□□□ -1.01
SMCHD1-208ENST00000583344 GPLD1P80108 840 aa8.76□□□□□ -1.01
SMCHD1-208ENST00000583344 ELOAQ14241 798 aaKnown RBP8.76□□□□□ -1.01
SMCHD1-208ENST00000583344 GRIK5Q16478 980 aa8.76□□□□□ -1.01
SMCHD1-208ENST00000583344 FAM26DQ5JW98 314 aa8.76□□□□□ -1.01
SMCHD1-208ENST00000583344 NKAPLQ5M9Q1 402 aa8.76□□□□□ -1.01
SMCHD1-208ENST00000583344 ETFBKMTQ8IXQ9 262 aa8.76□□□□□ -1.01
SMCHD1-208ENST00000583344 FMR1NBQ8N0W7 255 aaPredicted RBP8.76□□□□□ -1.01
SMCHD1-208ENST00000583344 XYLBO75191 536 aa8.75□□□□□ -1.01
SMCHD1-208ENST00000583344 ADGRE1Q14246 886 aa8.75□□□□□ -1.01
SMCHD1-208ENST00000583344 MBTPS1Q14703 1052 aa8.75□□□□□ -1.01
SMCHD1-208ENST00000583344 PCSK7Q16549 785 aa8.75□□□□□ -1.01
SMCHD1-208ENST00000583344 ELMSAN1Q6PJG2 1045 aa8.75□□□□□ -1.01
SMCHD1-208ENST00000583344 ILDR2Q71H61 639 aa8.75□□□□□ -1.01
SMCHD1-208ENST00000583344 Q8N3U1 123 aa8.75□□□□□ -1.01
SMCHD1-208ENST00000583344 C11orf16Q9NQ32 467 aa8.75□□□□□ -1.01
SMCHD1-208ENST00000583344 KCNMB2Q9Y691 235 aa8.75□□□□□ -1.01
SMCHD1-208ENST00000583344 C9orf172C9J069 976 aa8.74□□□□□ -1.01
SMCHD1-208ENST00000583344 TMEM164Q5U3C3 297 aa8.74□□□□□ -1.01
SMCHD1-208ENST00000583344 MSL1Q68DK7 614 aa8.74□□□□□ -1.01
SMCHD1-208ENST00000583344 FRRS1LQ9P0K9 344 aa8.74□□□□□ -1.01
SMCHD1-208ENST00000583344 EGFRP00533 1210 aa8.73□□□□□ -1.01
SMCHD1-208ENST00000583344 EIF2AK2P19525 551 aaKnown RBP8.73□□□□□ -1.01
SMCHD1-208ENST00000583344 C16orf46Q6P387 395 aa8.73□□□□□ -1.01
SMCHD1-208ENST00000583344 SMG9Q9H0W8 520 aaKnown RBP8.73□□□□□ -1.01
SMCHD1-208ENST00000583344 TLR7Q9NYK1 1049 aaKnown RBP8.73□□□□□ -1.01
SMCHD1-208ENST00000583344 CXXC1Q9P0U4 656 aaPredicted RBP8.73□□□□□ -1.01
SMCHD1-208ENST00000583344 TNFRSF10BO14763 440 aa8.72□□□□□ -1.01
SMCHD1-208ENST00000583344 DYRK3O43781 588 aa8.72□□□□□ -1.01
SMCHD1-208ENST00000583344 ATG7O95352 703 aa8.72□□□□□ -1.01
SMCHD1-208ENST00000583344 NRLP54845 237 aa8.72□□□□□ -1.01
SMCHD1-208ENST00000583344 NAA30Q147X3 362 aaPredicted RBP8.72□□□□□ -1.01
SMCHD1-208ENST00000583344 TRIP4Q15650 581 aaPredicted RBP8.72□□□□□ -1.01
SMCHD1-208ENST00000583344 LENG1Q96BZ8 264 aaPredicted RBP8.72□□□□□ -1.01
SMCHD1-208ENST00000583344 NSUN5Q96P11 429 aaKnown RBP8.72□□□□□ -1.01
SMCHD1-208ENST00000583344 J3QW42 95 aa8.71□□□□□ -1.02
SMCHD1-208ENST00000583344 MMP20O60882 483 aa8.71□□□□□ -1.02
SMCHD1-208ENST00000583344 TXNRD3Q86VQ6 643 aa8.71□□□□□ -1.02
SMCHD1-208ENST00000583344 WFDC8Q8IUA0 241 aa8.71□□□□□ -1.02
SMCHD1-208ENST00000583344 ZMYND15Q9H091 742 aa8.71□□□□□ -1.02
SMCHD1-208ENST00000583344 USP21Q9UK80 565 aa8.71□□□□□ -1.02
SMCHD1-208ENST00000583344 PSAPP07602 524 aa8.7□□□□□ -1.02
SMCHD1-208ENST00000583344 BRD2P25440 801 aaKnown RBP8.7□□□□□ -1.02
SMCHD1-208ENST00000583344 SLAIN2Q9P270 581 aa8.7□□□□□ -1.02
SMCHD1-208ENST00000583344 ARID4AP29374 1257 aaPredicted RBP8.69□□□□□ -1.02
SMCHD1-208ENST00000583344 NRG1Q02297 640 aaPredicted RBP8.69□□□□□ -1.02
SMCHD1-208ENST00000583344 ZMYM1Q5SVZ6 1142 aa8.69□□□□□ -1.02
SMCHD1-208ENST00000583344 COL26A1Q96A83 441 aa8.69□□□□□ -1.02
SMCHD1-208ENST00000583344 LOC102724428A0A0B4J2F2 783 aa8.68□□□□□ -1.02
SMCHD1-208ENST00000583344 SIK1P57059 783 aa8.68□□□□□ -1.02
SMCHD1-208ENST00000583344 FOXD4L6Q3SYB3 417 aaPredicted RBP8.68□□□□□ -1.02
SMCHD1-208ENST00000583344 FOXD4L3Q6VB84 417 aaPredicted RBP8.68□□□□□ -1.02
SMCHD1-208ENST00000583344 FBXO11Q86XK2 927 aa8.68□□□□□ -1.02
SMCHD1-208ENST00000583344 TTC9Q92623 222 aa8.68□□□□□ -1.02
SMCHD1-208ENST00000583344 PLD4Q96BZ4 506 aa8.68□□□□□ -1.02
SMCHD1-208ENST00000583344 ARID3CA6NKF2 412 aa8.67□□□□□ -1.02
SMCHD1-208ENST00000583344 DEAF1O75398 565 aaPredicted RBP8.67□□□□□ -1.02
SMCHD1-208ENST00000583344 DTWD1Q8N5C7 304 aa8.67□□□□□ -1.02
SMCHD1-208ENST00000583344 CLP1Q92989 425 aaKnown RBP8.67□□□□□ -1.02
SMCHD1-208ENST00000583344 PBXIP1Q96AQ6 731 aa8.67□□□□□ -1.02
SMCHD1-208ENST00000583344 CCDC97Q96F63 343 aaPredicted RBP8.67□□□□□ -1.02
SMCHD1-208ENST00000583344 GHRHP01286 108 aa8.66□□□□□ -1.02
SMCHD1-208ENST00000583344 PRSS36Q5K4E3 855 aa8.66□□□□□ -1.02
SMCHD1-208ENST00000583344 GDF6Q6KF10 455 aaPredicted RBP8.66□□□□□ -1.02
SMCHD1-208ENST00000583344 NLRP13Q86W25 1043 aa8.66□□□□□ -1.02
SMCHD1-208ENST00000583344 UBAP1LF5GYI3 381 aa8.65□□□□□ -1.02
SMCHD1-208ENST00000583344 ZBTB39O15060 712 aa8.65□□□□□ -1.02
SMCHD1-208ENST00000583344 PTCD1O75127 700 aaKnown RBP8.65□□□□□ -1.02
SMCHD1-208ENST00000583344 HOXD8P13378 290 aaPredicted RBP8.65□□□□□ -1.02
SMCHD1-208ENST00000583344 SOX18P35713 384 aa8.65□□□□□ -1.02
SMCHD1-208ENST00000583344 ZAP70P43403 619 aa8.65□□□□□ -1.02
SMCHD1-208ENST00000583344 TP53INP1Q96A56 240 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms