RNA–Protein interactions for RNA: ENST00000583294.1

SMARCE1-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-219ENST00000583294 C1orf229Q6ZS94 237 aaPredicted RBP9.67□□□□□ -0.86
SMARCE1-219ENST00000583294 GJD3Q8N144 294 aa9.67□□□□□ -0.86
SMARCE1-219ENST00000583294 NDFIP2Q9NV92 336 aa9.67□□□□□ -0.86
SMARCE1-219ENST00000583294 KCNMB2Q9Y691 235 aa9.67□□□□□ -0.86
SMARCE1-219ENST00000583294 EFSO43281 561 aa9.66□□□□□ -0.86
SMARCE1-219ENST00000583294 CTBSQ01459 385 aa9.66□□□□□ -0.86
SMARCE1-219ENST00000583294 PDE3BQ13370 1112 aa9.66□□□□□ -0.86
SMARCE1-219ENST00000583294 FAM129BQ96TA1 746 aa9.66□□□□□ -0.86
SMARCE1-219ENST00000583294 NIF3L1Q9GZT8 377 aa9.66□□□□□ -0.86
SMARCE1-219ENST00000583294 HCN2Q9UL51 889 aa9.66□□□□□ -0.86
SMARCE1-219ENST00000583294 GPR182O15218 404 aa9.65□□□□□ -0.86
SMARCE1-219ENST00000583294 XYLBO75191 536 aa9.65□□□□□ -0.86
SMARCE1-219ENST00000583294 CD33P20138 364 aa9.65□□□□□ -0.86
SMARCE1-219ENST00000583294 NPAS4Q8IUM7 802 aa9.65□□□□□ -0.86
SMARCE1-219ENST00000583294 ATXN7L1Q9ULK2 861 aaPredicted RBP9.65□□□□□ -0.86
SMARCE1-219ENST00000583294 FNDC3AQ9Y2H6 1198 aaKnown RBP9.65□□□□□ -0.86
SMARCE1-219ENST00000583294 RPLP1P05386 114 aaKnown RBP9.64□□□□□ -0.87
SMARCE1-219ENST00000583294 ERCC3P19447 782 aa9.64□□□□□ -0.87
SMARCE1-219ENST00000583294 FGFR3P22607 806 aa9.64□□□□□ -0.87
SMARCE1-219ENST00000583294 KRT25Q7Z3Z0 450 aa9.64□□□□□ -0.87
SMARCE1-219ENST00000583294 BEND7Q8N7W2 519 aaPredicted RBP9.64□□□□□ -0.87
SMARCE1-219ENST00000583294 GALNT6Q8NCL4 622 aa9.64□□□□□ -0.87
SMARCE1-219ENST00000583294 DMRTB1Q96MA1 342 aa9.64□□□□□ -0.87
SMARCE1-219ENST00000583294 LRRC4BQ9NT99 713 aa9.64□□□□□ -0.87
SMARCE1-219ENST00000583294 MARK1Q9P0L2 795 aa9.64□□□□□ -0.87
SMARCE1-219ENST00000583294 SHISA8B8ZZ34 492 aa9.63□□□□□ -0.87
SMARCE1-219ENST00000583294 IGHA2P01877 340 aa9.63□□□□□ -0.87
SMARCE1-219ENST00000583294 BMP4P12644 408 aa9.63□□□□□ -0.87
SMARCE1-219ENST00000583294 KCNQ4P56696 695 aa9.63□□□□□ -0.87
SMARCE1-219ENST00000583294 PLCB3Q01970 1234 aa9.63□□□□□ -0.87
SMARCE1-219ENST00000583294 ZNF438Q7Z4V0 828 aa9.63□□□□□ -0.87
SMARCE1-219ENST00000583294 TREHO43280 583 aa9.62□□□□□ -0.87
SMARCE1-219ENST00000583294 SASH3O75995 380 aa9.62□□□□□ -0.87
SMARCE1-219ENST00000583294 SNRPNP63162 240 aaKnown RBP9.62□□□□□ -0.87
SMARCE1-219ENST00000583294 EHHADHQ08426 723 aa9.62□□□□□ -0.87
SMARCE1-219ENST00000583294 GPAT2Q6NUI2 795 aa9.62□□□□□ -0.87
SMARCE1-219ENST00000583294 ELP3Q9H9T3 547 aa9.62□□□□□ -0.87
SMARCE1-219ENST00000583294 PHF20L1A8MW92 1017 aa9.61□□□□□ -0.87
SMARCE1-219ENST00000583294 MAPK8P45983 427 aa9.61□□□□□ -0.87
SMARCE1-219ENST00000583294 LAMC2Q13753 1193 aa9.61□□□□□ -0.87
SMARCE1-219ENST00000583294 CCINQ13939 588 aa9.61□□□□□ -0.87
SMARCE1-219ENST00000583294 DSC3Q14574 896 aa9.61□□□□□ -0.87
SMARCE1-219ENST00000583294 RAB44Q7Z6P3 723 aaPredicted RBP9.61□□□□□ -0.87
SMARCE1-219ENST00000583294 EDARADDQ8WWZ3 215 aa9.61□□□□□ -0.87
SMARCE1-219ENST00000583294 SLC30A3Q99726 388 aa9.61□□□□□ -0.87
SMARCE1-219ENST00000583294 GSX2Q9BZM3 304 aa9.61□□□□□ -0.87
SMARCE1-219ENST00000583294 P4HBP07237 508 aaKnown RBP9.6□□□□□ -0.87
SMARCE1-219ENST00000583294 TARSP26639 723 aaKnown RBP9.6□□□□□ -0.87
SMARCE1-219ENST00000583294 SPEM2Q0P670 501 aa9.6□□□□□ -0.87
SMARCE1-219ENST00000583294 ORC1Q13415 861 aa9.6□□□□□ -0.87
SMARCE1-219ENST00000583294 PODNQ7Z5L7 613 aa9.6□□□□□ -0.87
SMARCE1-219ENST00000583294 ZNF428Q96B54 188 aa9.6□□□□□ -0.87
SMARCE1-219ENST00000583294 BCL2L13Q9BXK5 485 aa9.6□□□□□ -0.87
SMARCE1-219ENST00000583294 TMEM63CQ9P1W3 806 aa9.6□□□□□ -0.87
SMARCE1-219ENST00000583294 FOXD3Q9UJU5 478 aaPredicted RBP9.6□□□□□ -0.87
SMARCE1-219ENST00000583294 EGFRP00533 1210 aa9.59□□□□□ -0.87
SMARCE1-219ENST00000583294 PDE12Q6L8Q7 609 aaKnown RBP9.59□□□□□ -0.87
SMARCE1-219ENST00000583294 BHMTQ93088 406 aa9.59□□□□□ -0.87
SMARCE1-219ENST00000583294 PNMA5Q96PV4 448 aa9.59□□□□□ -0.87
SMARCE1-219ENST00000583294 GGA1Q9UJY5 639 aa9.59□□□□□ -0.87
SMARCE1-219ENST00000583294 GDF2Q9UK05 429 aaPredicted RBP9.59□□□□□ -0.87
SMARCE1-219ENST00000583294 TAGLNQ01995 201 aaKnown RBP9.58□□□□□ -0.88
SMARCE1-219ENST00000583294 FMR1Q06787 632 aaKnown RBP eCLIP9.58□□□□□ -0.88
SMARCE1-219ENST00000583294 EAPPQ56P03 285 aaPredicted RBP9.58□□□□□ -0.88
SMARCE1-219ENST00000583294 NLRP13Q86W25 1043 aa9.58□□□□□ -0.88
SMARCE1-219ENST00000583294 GOLGA6L1Q8N7Z2 621 aa9.58□□□□□ -0.88
SMARCE1-219ENST00000583294 GIPC2Q8TF65 315 aa9.58□□□□□ -0.88
SMARCE1-219ENST00000583294 ALKBH8Q96BT7 664 aaKnown RBP9.58□□□□□ -0.88
SMARCE1-219ENST00000583294 DCAF5Q96JK2 942 aa9.58□□□□□ -0.88
SMARCE1-219ENST00000583294 TNFRSF21O75509 655 aa9.57□□□□□ -0.88
SMARCE1-219ENST00000583294 RARAP10276 462 aa9.57□□□□□ -0.88
SMARCE1-219ENST00000583294 NFKB1P19838 968 aa9.57□□□□□ -0.88
SMARCE1-219ENST00000583294 SUZ12Q15022 739 aaKnown RBP9.57□□□□□ -0.88
SMARCE1-219ENST00000583294 XKR5Q6UX68 686 aa9.57□□□□□ -0.88
SMARCE1-219ENST00000583294 ZFATQ9P243 1243 aa9.57□□□□□ -0.88
SMARCE1-219ENST00000583294 PRR12Q9ULL5 1215 aa9.57□□□□□ -0.88
SMARCE1-219ENST00000583294 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.57□□□□□ -0.88
SMARCE1-219ENST00000583294 TTC39BQ5VTQ0 682 aaPredicted RBP9.56□□□□□ -0.88
SMARCE1-219ENST00000583294 FBXO33Q7Z6M2 555 aa9.56□□□□□ -0.88
SMARCE1-219ENST00000583294 RRAGCQ9HB90 399 aa9.56□□□□□ -0.88
SMARCE1-219ENST00000583294 C11orf16Q9NQ32 467 aa9.56□□□□□ -0.88
SMARCE1-219ENST00000583294 ABI2Q9NYB9 513 aaPredicted RBP9.56□□□□□ -0.88
SMARCE1-219ENST00000583294 CNTN3Q9P232 1028 aa9.56□□□□□ -0.88
SMARCE1-219ENST00000583294 WWC3Q9ULE0 1092 aa9.56□□□□□ -0.88
SMARCE1-219ENST00000583294 PNMA6FA0A0J9YX94 578 aa9.55□□□□□ -0.88
SMARCE1-219ENST00000583294 NEURL1BA8MQ27 555 aa9.55□□□□□ -0.88
SMARCE1-219ENST00000583294 MMP20O60882 483 aa9.55□□□□□ -0.88
SMARCE1-219ENST00000583294 PHACTR2O75167 634 aa9.55□□□□□ -0.88
SMARCE1-219ENST00000583294 NEFLP07196 543 aa9.55□□□□□ -0.88
SMARCE1-219ENST00000583294 RBM25P49756 843 aaKnown RBP9.55□□□□□ -0.88
SMARCE1-219ENST00000583294 PLA2G4EQ3MJ16 856 aa9.55□□□□□ -0.88
SMARCE1-219ENST00000583294 USPL1Q5W0Q7 1092 aa9.55□□□□□ -0.88
SMARCE1-219ENST00000583294 C1orf127Q8N9H9 656 aa9.55□□□□□ -0.88
SMARCE1-219ENST00000583294 SNX29Q8TEQ0 813 aa9.55□□□□□ -0.88
SMARCE1-219ENST00000583294 CSRNP1Q96S65 589 aa9.55□□□□□ -0.88
SMARCE1-219ENST00000583294 SETDB2Q96T68 719 aa9.55□□□□□ -0.88
SMARCE1-219ENST00000583294 AMOTL2Q9Y2J4 779 aa9.55□□□□□ -0.88
SMARCE1-219ENST00000583294 EIF1AYO14602 144 aaKnown RBP9.54□□□□□ -0.88
SMARCE1-219ENST00000583294 ITGB2P05107 769 aa9.54□□□□□ -0.88
SMARCE1-219ENST00000583294 LDHBP07195 334 aaKnown RBP9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms