RNA–Protein interactions for RNA: ENST00000583080.1

SREBF1-221, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-221ENST00000583080 TSKSQ9UJT2 592 aa21.24■□□□□ 0.99
SREBF1-221ENST00000583080 LRRC37AA6NMS7 1700 aa21.24■□□□□ 0.99
SREBF1-221ENST00000583080 RAD17O75943 681 aa21.23■□□□□ 0.99
SREBF1-221ENST00000583080 CELF2O95319 508 aaKnown RBP21.23■□□□□ 0.99
SREBF1-221ENST00000583080 KIAA2012Q0VF49 1180 aa21.23■□□□□ 0.99
SREBF1-221ENST00000583080 SP8Q8IXZ3 490 aa21.23■□□□□ 0.99
SREBF1-221ENST00000583080 MPNDQ8N594 471 aa21.23■□□□□ 0.99
SREBF1-221ENST00000583080 DDX60Q8IY21 1712 aaKnown RBP21.22■□□□□ 0.99
SREBF1-221ENST00000583080 SHTN1A0MZ66 631 aa21.22■□□□□ 0.99
SREBF1-221ENST00000583080 BBOX1O75936 387 aa21.22■□□□□ 0.99
SREBF1-221ENST00000583080 KRT24Q2M2I5 525 aa21.22■□□□□ 0.99
SREBF1-221ENST00000583080 CIAPIN1Q6FI81 312 aa21.22■□□□□ 0.99
SREBF1-221ENST00000583080 TRPM4Q8TD43 1214 aa21.22■□□□□ 0.99
SREBF1-221ENST00000583080 COL4A1P02462 1669 aa21.21■□□□□ 0.99
SREBF1-221ENST00000583080 YDJCA8MPS7 323 aa21.21■□□□□ 0.99
SREBF1-221ENST00000583080 HIRAP54198 1017 aaPredicted RBP21.21■□□□□ 0.99
SREBF1-221ENST00000583080 GRAPQ13588 217 aa21.21■□□□□ 0.99
SREBF1-221ENST00000583080 HSP90AB3PQ58FF7 597 aa21.21■□□□□ 0.99
SREBF1-221ENST00000583080 SAPCD2Q86UD0 394 aa21.21■□□□□ 0.99
SREBF1-221ENST00000583080 GRAPLQ8TC17 118 aaPredicted RBP21.21■□□□□ 0.99
SREBF1-221ENST00000583080 BEGAINQ9BUH8 593 aa21.21■□□□□ 0.99
SREBF1-221ENST00000583080 TRMT112Q9UI30 125 aaKnown RBP21.21■□□□□ 0.99
SREBF1-221ENST00000583080 TMPOP42166 694 aaKnown RBP21.2■□□□□ 0.98
SREBF1-221ENST00000583080 TCIRG1Q13488 830 aa21.2■□□□□ 0.98
SREBF1-221ENST00000583080 DDX46Q7L014 1031 aaKnown RBP21.2■□□□□ 0.98
SREBF1-221ENST00000583080 BCL2L13Q9BXK5 485 aa21.2■□□□□ 0.98
SREBF1-221ENST00000583080 BABAM1Q9NWV8 329 aa21.2■□□□□ 0.98
SREBF1-221ENST00000583080 SH3TC1Q8TE82 1336 aa21.2■□□□□ 0.98
SREBF1-221ENST00000583080 CDHR2Q9BYE9 1310 aa21.2■□□□□ 0.98
SREBF1-221ENST00000583080 FAM161AQ3B820 660 aa21.19■□□□□ 0.98
SREBF1-221ENST00000583080 ZNF408Q9H9D4 720 aa21.19■□□□□ 0.98
SREBF1-221ENST00000583080 PGAP2Q9UHJ9 254 aa21.19■□□□□ 0.98
SREBF1-221ENST00000583080 MAP2K2P36507 400 aa21.17■□□□□ 0.98
SREBF1-221ENST00000583080 LMOD3Q0VAK6 560 aa21.17■□□□□ 0.98
SREBF1-221ENST00000583080 CHPF2Q9P2E5 772 aa21.17■□□□□ 0.98
SREBF1-221ENST00000583080 TNIP1Q15025 636 aa21.16■□□□□ 0.98
SREBF1-221ENST00000583080 DLK2Q6UY11 383 aa21.16■□□□□ 0.98
SREBF1-221ENST00000583080 CCDC146Q8IYE0 955 aa21.16■□□□□ 0.98
SREBF1-221ENST00000583080 CNOT7Q9UIV1 285 aaKnown RBP21.16■□□□□ 0.98
SREBF1-221ENST00000583080 MICALL2Q8IY33 904 aa21.15■□□□□ 0.98
SREBF1-221ENST00000583080 ZC3H15Q8WU90 426 aaKnown RBP21.15■□□□□ 0.98
SREBF1-221ENST00000583080 ZBTB12Q9Y330 459 aaPredicted RBP21.15■□□□□ 0.98
SREBF1-221ENST00000583080 CCDC85CA6NKD9 419 aa21.14■□□□□ 0.97
SREBF1-221ENST00000583080 NEUROD2Q15784 382 aa21.14■□□□□ 0.97
SREBF1-221ENST00000583080 CELF1Q92879 486 aaKnown RBP21.14■□□□□ 0.97
SREBF1-221ENST00000583080 HHIPL1Q96JK4 782 aa21.14■□□□□ 0.97
SREBF1-221ENST00000583080 CHL1O00533 1208 aa21.13■□□□□ 0.97
SREBF1-221ENST00000583080 CDC37L1Q7L3B6 337 aa21.13■□□□□ 0.97
SREBF1-221ENST00000583080 ZIC5Q96T25 663 aa21.13■□□□□ 0.97
SREBF1-221ENST00000583080 DBNDD1Q9H9R9 158 aa21.13■□□□□ 0.97
SREBF1-221ENST00000583080 ATP5J2-PTCD1G3V325 749 aa21.12■□□□□ 0.97
SREBF1-221ENST00000583080 PSMD14O00487 310 aa21.12■□□□□ 0.97
SREBF1-221ENST00000583080 EGFRP00533 1210 aa21.12■□□□□ 0.97
SREBF1-221ENST00000583080 BRPF1P55201 1214 aaPredicted RBP21.12■□□□□ 0.97
SREBF1-221ENST00000583080 HDGFL1Q5TGJ6 251 aa21.12■□□□□ 0.97
SREBF1-221ENST00000583080 SAMD7Q7Z3H4 446 aa21.12■□□□□ 0.97
SREBF1-221ENST00000583080 TMC4Q7Z404 712 aa21.12■□□□□ 0.97
SREBF1-221ENST00000583080 USP48Q86UV5 1035 aa21.12■□□□□ 0.97
SREBF1-221ENST00000583080 FAM89AQ96GI7 184 aa21.12■□□□□ 0.97
SREBF1-221ENST00000583080 ISCA1Q9BUE6 129 aa21.12■□□□□ 0.97
SREBF1-221ENST00000583080 LAS1LQ9Y4W2 734 aaKnown RBP21.12■□□□□ 0.97
SREBF1-221ENST00000583080 CASP8AP2Q9UKL3 1982 aa21.12■□□□□ 0.97
SREBF1-221ENST00000583080 H7C1D1 291 aa21.11■□□□□ 0.97
SREBF1-221ENST00000583080 PLBD2Q8NHP8 589 aa21.11■□□□□ 0.97
SREBF1-221ENST00000583080 NSFL1CQ9UNZ2 370 aaKnown RBP21.11■□□□□ 0.97
SREBF1-221ENST00000583080 TRIM35Q9UPQ4 493 aa21.11■□□□□ 0.97
SREBF1-221ENST00000583080 RTL9Q8NET4 1388 aa21.1■□□□□ 0.97
SREBF1-221ENST00000583080 RIMBP2O15034 1052 aa21.1■□□□□ 0.97
SREBF1-221ENST00000583080 CA12O43570 354 aa21.1■□□□□ 0.97
SREBF1-221ENST00000583080 GPSM2P81274 684 aa21.1■□□□□ 0.97
SREBF1-221ENST00000583080 RALBP1Q15311 655 aa21.1■□□□□ 0.97
SREBF1-221ENST00000583080 SF3B3Q15393 1217 aaKnown RBP21.1■□□□□ 0.97
SREBF1-221ENST00000583080 WASHC4Q2M389 1173 aa21.1■□□□□ 0.97
SREBF1-221ENST00000583080 RTL5Q5HYW3 569 aaPredicted RBP21.1■□□□□ 0.97
SREBF1-221ENST00000583080 POLLQ9UGP5 575 aa21.1■□□□□ 0.97
SREBF1-221ENST00000583080 HUNKP57058 714 aa21.09■□□□□ 0.97
SREBF1-221ENST00000583080 TBC1D10BQ4KMP7 808 aaPredicted RBP21.09■□□□□ 0.97
SREBF1-221ENST00000583080 ANKRD13DQ6ZTN6 518 aa21.09■□□□□ 0.97
SREBF1-221ENST00000583080 MCOLN1Q9GZU1 580 aa21.09■□□□□ 0.97
SREBF1-221ENST00000583080 KCNQ5Q9NR82 932 aa21.09■□□□□ 0.97
SREBF1-221ENST00000583080 SCN9AQ15858 1988 aa21.08■□□□□ 0.97
SREBF1-221ENST00000583080 C6orf229H3BNL8 230 aa21.08■□□□□ 0.97
SREBF1-221ENST00000583080 ECE2O60344 883 aa21.08■□□□□ 0.97
SREBF1-221ENST00000583080 DPF2Q92785 391 aa21.08■□□□□ 0.97
SREBF1-221ENST00000583080 ADM5C9JUS6 153 aa21.07■□□□□ 0.96
SREBF1-221ENST00000583080 NOGQ13253 232 aa21.07■□□□□ 0.96
SREBF1-221ENST00000583080 DOK7Q18PE1 504 aa21.07■□□□□ 0.96
SREBF1-221ENST00000583080 KRT26Q7Z3Y9 468 aa21.07■□□□□ 0.96
SREBF1-221ENST00000583080 HOXB7P09629 217 aa21.06■□□□□ 0.96
SREBF1-221ENST00000583080 MLLT1Q03111 559 aaPredicted RBP21.06■□□□□ 0.96
SREBF1-221ENST00000583080 DBF4Q9UBU7 674 aaPredicted RBP21.06■□□□□ 0.96
SREBF1-221ENST00000583080 POLR2AP24928 1970 aaKnown RBP21.06■□□□□ 0.96
SREBF1-221ENST00000583080 IRS4O14654 1257 aaPredicted RBP21.05■□□□□ 0.96
SREBF1-221ENST00000583080 RGS19P49795 217 aa21.05■□□□□ 0.96
SREBF1-221ENST00000583080 RBM26Q5T8P6 1007 aaKnown RBP21.05■□□□□ 0.96
SREBF1-221ENST00000583080 TBC1D16Q8TBP0 767 aa21.05■□□□□ 0.96
SREBF1-221ENST00000583080 MYBBP1AQ9BQG0 1328 aaKnown RBP21.04■□□□□ 0.96
SREBF1-221ENST00000583080 FAM155AB1AL88 458 aaPredicted RBP21.04■□□□□ 0.96
SREBF1-221ENST00000583080 DUSP27Q5VZP5 1158 aa21.04■□□□□ 0.96
SREBF1-221ENST00000583080 RUNDC1Q96C34 613 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms