RNA–Protein interactions for RNA: ENST00000582981.5

TOP3A-214, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 3,239 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-214ENST00000582981 SLC27A2O14975 620 aa12.39□□□□□ -0.43
TOP3A-214ENST00000582981 SECISBP2LQ93073 1101 aaKnown RBP12.39□□□□□ -0.43
TOP3A-214ENST00000582981 NOL10Q9BSC4 688 aaKnown RBP12.39□□□□□ -0.43
TOP3A-214ENST00000582981 TECPR2O15040 1411 aa12.39□□□□□ -0.43
TOP3A-214ENST00000582981 ARID5BQ14865 1188 aa12.39□□□□□ -0.43
TOP3A-214ENST00000582981 EPHA10Q5JZY3 1008 aa12.39□□□□□ -0.43
TOP3A-214ENST00000582981 CHST3Q7LGC8 479 aa12.39□□□□□ -0.43
TOP3A-214ENST00000582981 RAB11FIP4Q86YS3 637 aa12.39□□□□□ -0.43
TOP3A-214ENST00000582981 DNAJC25Q9H1X3 360 aa12.39□□□□□ -0.43
TOP3A-214ENST00000582981 TPM3P06753 285 aa12.38□□□□□ -0.43
TOP3A-214ENST00000582981 G3BP1Q13283 466 aaKnown RBP eCLIP12.38□□□□□ -0.43
TOP3A-214ENST00000582981 ELF2Q15723 593 aa12.38□□□□□ -0.43
TOP3A-214ENST00000582981 KAZALD1Q96I82 304 aa12.38□□□□□ -0.43
TOP3A-214ENST00000582981 NUP62CLQ9H1M0 184 aa12.38□□□□□ -0.43
TOP3A-214ENST00000582981 ZNF215Q9UL58 517 aaPredicted RBP12.38□□□□□ -0.43
TOP3A-214ENST00000582981 A0A0G2JLW4 131 aa12.38□□□□□ -0.43
TOP3A-214ENST00000582981 ATP5J2-PTCD1G3V325 749 aa12.38□□□□□ -0.43
TOP3A-214ENST00000582981 PTCD1O75127 700 aaKnown RBP12.38□□□□□ -0.43
TOP3A-214ENST00000582981 TYRO3Q06418 890 aa12.38□□□□□ -0.43
TOP3A-214ENST00000582981 BLOC1S2Q6QNY1 142 aa12.38□□□□□ -0.43
TOP3A-214ENST00000582981 FUCA2Q9BTY2 467 aa12.38□□□□□ -0.43
TOP3A-214ENST00000582981 NR1I2O75469 434 aa12.37□□□□□ -0.43
TOP3A-214ENST00000582981 SLC20A2Q08357 652 aa12.37□□□□□ -0.43
TOP3A-214ENST00000582981 RGS22Q8NE09 1264 aa12.37□□□□□ -0.43
TOP3A-214ENST00000582981 ZNF397Q8NF99 534 aaPredicted RBP12.37□□□□□ -0.43
TOP3A-214ENST00000582981 RUFY2Q8WXA3 655 aa12.37□□□□□ -0.43
TOP3A-214ENST00000582981 SYTL4Q96C24 671 aaPredicted RBP12.37□□□□□ -0.43
TOP3A-214ENST00000582981 TRIM5Q9C035 493 aa12.37□□□□□ -0.43
TOP3A-214ENST00000582981 TNMDQ9H2S6 317 aa12.37□□□□□ -0.43
TOP3A-214ENST00000582981 KRT85P78386 507 aa12.37□□□□□ -0.43
TOP3A-214ENST00000582981 NECTIN1Q15223 517 aa12.37□□□□□ -0.43
TOP3A-214ENST00000582981 DDX46Q7L014 1031 aaKnown RBP12.37□□□□□ -0.43
TOP3A-214ENST00000582981 SPATA32Q96LK8 384 aa12.37□□□□□ -0.43
TOP3A-214ENST00000582981 ZSWIM6Q9HCJ5 1215 aa12.37□□□□□ -0.43
TOP3A-214ENST00000582981 RSPH14Q9UHP6 348 aa12.37□□□□□ -0.43
TOP3A-214ENST00000582981 FEZ2Q9UHY8 353 aaPredicted RBP12.37□□□□□ -0.43
TOP3A-214ENST00000582981 CCDC192P0DO97 292 aa12.37□□□□□ -0.43
TOP3A-214ENST00000582981 PSME1Q06323 249 aa12.37□□□□□ -0.43
TOP3A-214ENST00000582981 FBXO38Q6PIJ6 1188 aa12.37□□□□□ -0.43
TOP3A-214ENST00000582981 RIC3Q7Z5B4 369 aa12.37□□□□□ -0.43
TOP3A-214ENST00000582981 SIRT1Q96EB6 747 aa12.37□□□□□ -0.43
TOP3A-214ENST00000582981 ATP6V1DQ9Y5K8 247 aa12.37□□□□□ -0.43
TOP3A-214ENST00000582981 MRVI1Q9Y6F6 885 aa12.37□□□□□ -0.43
TOP3A-214ENST00000582981 TULP2O00295 520 aa12.36□□□□□ -0.43
TOP3A-214ENST00000582981 POLR3GO15318 223 aaPredicted RBP12.36□□□□□ -0.43
TOP3A-214ENST00000582981 ZC3H6P61129 1189 aaKnown RBP12.36□□□□□ -0.43
TOP3A-214ENST00000582981 RAD51AP2Q09MP3 1159 aa12.36□□□□□ -0.43
TOP3A-214ENST00000582981 MAP3K11Q16584 847 aa12.36□□□□□ -0.43
TOP3A-214ENST00000582981 VPS53Q5VIR6 699 aa12.36□□□□□ -0.43
TOP3A-214ENST00000582981 TMEM87AQ8NBN3 555 aa12.36□□□□□ -0.43
TOP3A-214ENST00000582981 XRN1Q8IZH2 1706 aaKnown RBP12.36□□□□□ -0.43
TOP3A-214ENST00000582981 CCT2P78371 535 aaKnown RBP12.36□□□□□ -0.43
TOP3A-214ENST00000582981 C1orf141Q5JVX7 400 aa12.36□□□□□ -0.43
TOP3A-214ENST00000582981 CEP135Q66GS9 1140 aa12.36□□□□□ -0.43
TOP3A-214ENST00000582981 MYD88Q99836 296 aa12.36□□□□□ -0.43
TOP3A-214ENST00000582981 CBX8Q9HC52 389 aa12.36□□□□□ -0.43
TOP3A-214ENST00000582981 RGPD1P0DJD0 1748 aa12.36□□□□□ -0.43
TOP3A-214ENST00000582981 AOX1Q06278 1338 aa12.36□□□□□ -0.43
TOP3A-214ENST00000582981 NEK11Q8NG66 645 aa12.35□□□□□ -0.43
TOP3A-214ENST00000582981 GPATCH3Q96I76 525 aa12.35□□□□□ -0.43
TOP3A-214ENST00000582981 DBF4Q9UBU7 674 aaPredicted RBP12.35□□□□□ -0.43
TOP3A-214ENST00000582981 PHF8Q9UPP1 1060 aa12.35□□□□□ -0.43
TOP3A-214ENST00000582981 BRF1Q92994 677 aa12.35□□□□□ -0.43
TOP3A-214ENST00000582981 NCOA5Q9HCD5 579 aaKnown RBP12.35□□□□□ -0.43
TOP3A-214ENST00000582981 PAXBP1Q9Y5B6 917 aa12.35□□□□□ -0.43
TOP3A-214ENST00000582981 FAM208AQ9UK61 1670 aaKnown RBP12.35□□□□□ -0.43
TOP3A-214ENST00000582981 GRM8O00222 908 aa12.35□□□□□ -0.43
TOP3A-214ENST00000582981 HTATSF1O43719 755 aaKnown RBP12.35□□□□□ -0.43
TOP3A-214ENST00000582981 RBM6P78332 1123 aaKnown RBP12.35□□□□□ -0.43
TOP3A-214ENST00000582981 TOB2Q14106 344 aaPredicted RBP12.35□□□□□ -0.43
TOP3A-214ENST00000582981 C10orf67Q8IYJ2 551 aa12.35□□□□□ -0.43
TOP3A-214ENST00000582981 EVI5LQ96CN4 794 aa12.35□□□□□ -0.43
TOP3A-214ENST00000582981 TRMT1Q9NXH9 659 aaKnown RBP12.35□□□□□ -0.43
TOP3A-214ENST00000582981 GIGYF1O75420 1035 aaPredicted RBP12.34□□□□□ -0.43
TOP3A-214ENST00000582981 HSP90AB4PQ58FF6 505 aa12.34□□□□□ -0.43
TOP3A-214ENST00000582981 ORAI2Q96SN7 254 aa12.34□□□□□ -0.43
TOP3A-214ENST00000582981 TSPYL1Q9H0U9 437 aa12.34□□□□□ -0.43
TOP3A-214ENST00000582981 USP16Q9Y5T5 823 aa12.34□□□□□ -0.43
TOP3A-214ENST00000582981 HSP90AB3PQ58FF7 597 aa12.34□□□□□ -0.43
TOP3A-214ENST00000582981 PGBD1Q96JS3 809 aa12.34□□□□□ -0.43
TOP3A-214ENST00000582981 H3BQV1 296 aa12.33□□□□□ -0.43
TOP3A-214ENST00000582981 IGKV5-2P06315 115 aa12.33□□□□□ -0.43
TOP3A-214ENST00000582981 SYCP1Q15431 976 aa12.33□□□□□ -0.43
TOP3A-214ENST00000582981 IFFO2Q5TF58 517 aa12.33□□□□□ -0.43
TOP3A-214ENST00000582981 KSR2Q6VAB6 950 aa12.33□□□□□ -0.43
TOP3A-214ENST00000582981 FILIP1Q7Z7B0 1213 aa12.33□□□□□ -0.43
TOP3A-214ENST00000582981 TEX2Q8IWB9 1127 aa12.33□□□□□ -0.43
TOP3A-214ENST00000582981 LEO1Q8WVC0 666 aaPredicted RBP12.33□□□□□ -0.43
TOP3A-214ENST00000582981 CCDC85AQ96PX6 553 aaPredicted RBP12.33□□□□□ -0.43
TOP3A-214ENST00000582981 AXIN2Q9Y2T1 843 aa12.33□□□□□ -0.43
TOP3A-214ENST00000582981 RNMTO43148 476 aaKnown RBP12.33□□□□□ -0.44
TOP3A-214ENST00000582981 CCDC144BQ3MJ40 725 aa12.33□□□□□ -0.44
TOP3A-214ENST00000582981 OTUD7BQ6GQQ9 843 aa12.33□□□□□ -0.44
TOP3A-214ENST00000582981 CCDC144CPQ8IYA2 1237 aa12.33□□□□□ -0.44
TOP3A-214ENST00000582981 FAM200AQ8TCP9 573 aa12.33□□□□□ -0.44
TOP3A-214ENST00000582981 XAGE3Q8WTP9 111 aa12.33□□□□□ -0.44
TOP3A-214ENST00000582981 DDX17Q92841 729 aaKnown RBP12.33□□□□□ -0.44
TOP3A-214ENST00000582981 PXDNQ92626 1479 aa12.33□□□□□ -0.44
TOP3A-214ENST00000582981 TTC41PQ6P2S7 1318 aa12.33□□□□□ -0.44
TOP3A-214ENST00000582981 Q6ZUG5 572 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms