RNA–Protein interactions for RNA: ENST00000582169.5

EIF4A1-223, Transcript of eukaryotic translation initiation factor 4A1, human

TSL 4

Gene EIF4A1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EIF4A1-223	ENST00000582169	DCAF8L1	A6NGE4	600 aa		13.54	□□□□□ -0.24
EIF4A1-223	ENST00000582169	CSF1R	P07333	972 aa		13.54	□□□□□ -0.24
EIF4A1-223	ENST00000582169	C2CD5	Q86YS7	1000 aa		13.54	□□□□□ -0.24
EIF4A1-223	ENST00000582169	CCDC24	Q8N4L8	307 aa		13.54	□□□□□ -0.24
EIF4A1-223	ENST00000582169	ANKRD44	Q8N8A2	993 aa		13.54	□□□□□ -0.24
EIF4A1-223	ENST00000582169	NLGN2	Q8NFZ4	835 aa		13.54	□□□□□ -0.24
EIF4A1-223	ENST00000582169	RPGR	Q92834	1020 aa	Known RBP	13.54	□□□□□ -0.24
EIF4A1-223	ENST00000582169	HDAC5	Q9UQL6	1122 aa		13.54	□□□□□ -0.24
EIF4A1-223	ENST00000582169	IRS4	O14654	1257 aa	Predicted RBP	13.53	□□□□□ -0.24
EIF4A1-223	ENST00000582169	RTL5	Q5HYW3	569 aa	Predicted RBP	13.53	□□□□□ -0.24
EIF4A1-223	ENST00000582169	CEP85	Q6P2H3	762 aa		13.53	□□□□□ -0.24
EIF4A1-223	ENST00000582169	BICC1	Q9H694	974 aa	Known RBP	13.53	□□□□□ -0.24
EIF4A1-223	ENST00000582169	C1orf115	Q9H7X2	142 aa		13.53	□□□□□ -0.24
EIF4A1-223	ENST00000582169	KLRG2	A4D1S0	409 aa	Predicted RBP	13.52	□□□□□ -0.25
EIF4A1-223	ENST00000582169	PDE8A	O60658	829 aa		13.52	□□□□□ -0.25
EIF4A1-223	ENST00000582169	HCLS1	P14317	486 aa	Predicted RBP	13.52	□□□□□ -0.25
EIF4A1-223	ENST00000582169	NPR1	P16066	1061 aa		13.52	□□□□□ -0.25
EIF4A1-223	ENST00000582169	DPEP1	P16444	411 aa		13.52	□□□□□ -0.25
EIF4A1-223	ENST00000582169	ATP8B2	P98198	1209 aa		13.52	□□□□□ -0.25
EIF4A1-223	ENST00000582169	CRY2	Q49AN0	593 aa		13.52	□□□□□ -0.25
EIF4A1-223	ENST00000582169	STYK1	Q6J9G0	422 aa		13.52	□□□□□ -0.25
EIF4A1-223	ENST00000582169	RPAP2	Q8IXW5	612 aa	Predicted RBP	13.52	□□□□□ -0.25
EIF4A1-223	ENST00000582169	MASTL	Q96GX5	879 aa		13.52	□□□□□ -0.25
EIF4A1-223	ENST00000582169	PIM2	Q9P1W9	311 aa		13.52	□□□□□ -0.25
EIF4A1-223	ENST00000582169	CACNA1S	Q13698	1873 aa		13.52	□□□□□ -0.25
EIF4A1-223	ENST00000582169	ARFGEF1	Q9Y6D6	1849 aa		13.51	□□□□□ -0.25
EIF4A1-223	ENST00000582169		A0A0G2JLW4	131 aa		13.51	□□□□□ -0.25
EIF4A1-223	ENST00000582169	SRGN	P10124	158 aa		13.51	□□□□□ -0.25
EIF4A1-223	ENST00000582169	CHRNA5	P30532	468 aa		13.51	□□□□□ -0.25
EIF4A1-223	ENST00000582169	POLA2	Q14181	598 aa		13.51	□□□□□ -0.25
EIF4A1-223	ENST00000582169	SF3B3	Q15393	1217 aa	Known RBP	13.51	□□□□□ -0.25
EIF4A1-223	ENST00000582169	TTLL11	Q8NHH1	800 aa		13.51	□□□□□ -0.25
EIF4A1-223	ENST00000582169	SSH3	Q8TE77	659 aa		13.51	□□□□□ -0.25
EIF4A1-223	ENST00000582169	CNKSR1	Q969H4	720 aa		13.51	□□□□□ -0.25
EIF4A1-223	ENST00000582169	ZNF622	Q969S3	477 aa	Known RBP eCLIP	13.51	□□□□□ -0.25
EIF4A1-223	ENST00000582169	RTL9	Q8NET4	1388 aa		13.5	□□□□□ -0.25
EIF4A1-223	ENST00000582169	PNMA6E	A0A0J9YXQ4	647 aa		13.5	□□□□□ -0.25
EIF4A1-223	ENST00000582169	ALDH1B1	P30837	517 aa		13.5	□□□□□ -0.25
EIF4A1-223	ENST00000582169	CTSW	P56202	376 aa		13.5	□□□□□ -0.25
EIF4A1-223	ENST00000582169	CCDC152	Q4G0S7	254 aa		13.5	□□□□□ -0.25
EIF4A1-223	ENST00000582169	DALRD3	Q5D0E6	543 aa	Known RBP	13.5	□□□□□ -0.25
EIF4A1-223	ENST00000582169	C3orf67	Q6ZVT6	689 aa		13.5	□□□□□ -0.25
EIF4A1-223	ENST00000582169	RBM17	Q96I25	401 aa	Known RBP	13.5	□□□□□ -0.25
EIF4A1-223	ENST00000582169	RFX5	P48382	616 aa	Predicted RBP	13.49	□□□□□ -0.25
EIF4A1-223	ENST00000582169	HDAC1	Q13547	482 aa	Predicted RBP	13.49	□□□□□ -0.25
EIF4A1-223	ENST00000582169	LMBR1L	Q6UX01	489 aa		13.49	□□□□□ -0.25
EIF4A1-223	ENST00000582169	DDX46	Q7L014	1031 aa	Known RBP	13.49	□□□□□ -0.25
EIF4A1-223	ENST00000582169	PELP1	Q8IZL8	1130 aa	Known RBP	13.49	□□□□□ -0.25
EIF4A1-223	ENST00000582169	TTLL6	Q8N841	843 aa		13.49	□□□□□ -0.25
EIF4A1-223	ENST00000582169	GPR162	Q16538	588 aa		13.48	□□□□□ -0.25
EIF4A1-223	ENST00000582169	SOGA3	Q5TF21	947 aa		13.48	□□□□□ -0.25
EIF4A1-223	ENST00000582169	PPP4R2	Q9NY27	417 aa		13.48	□□□□□ -0.25
EIF4A1-223	ENST00000582169	BCS1L	Q9Y276	419 aa		13.48	□□□□□ -0.25
EIF4A1-223	ENST00000582169	GTF3C3	Q9Y5Q9	886 aa		13.48	□□□□□ -0.25
EIF4A1-223	ENST00000582169	IGHD	P01880	384 aa		13.47	□□□□□ -0.25
EIF4A1-223	ENST00000582169	KCNA3	P22001	575 aa		13.47	□□□□□ -0.25
EIF4A1-223	ENST00000582169	HOXA10	P31260	410 aa	Predicted RBP	13.47	□□□□□ -0.25
EIF4A1-223	ENST00000582169	PRPF40B	Q6NWY9	871 aa	Known RBP	13.47	□□□□□ -0.25
EIF4A1-223	ENST00000582169	CRAMP1	Q96RY5	1269 aa		13.47	□□□□□ -0.25
EIF4A1-223	ENST00000582169	TMX4	Q9H1E5	349 aa	Predicted RBP	13.47	□□□□□ -0.25
EIF4A1-223	ENST00000582169	GOLGB1	Q14789	3259 aa	Known RBP	13.47	□□□□□ -0.25
EIF4A1-223	ENST00000582169	COL4A1	P02462	1669 aa		13.47	□□□□□ -0.25
EIF4A1-223	ENST00000582169	SRGAP3	O43295	1099 aa		13.46	□□□□□ -0.25
EIF4A1-223	ENST00000582169	GRIN3B	O60391	1043 aa		13.46	□□□□□ -0.25
EIF4A1-223	ENST00000582169	TMC4	Q7Z404	712 aa		13.46	□□□□□ -0.25
EIF4A1-223	ENST00000582169	CDC5L	Q99459	802 aa	Known RBP	13.46	□□□□□ -0.25
EIF4A1-223	ENST00000582169	GREM2	Q9H772	168 aa		13.46	□□□□□ -0.25
EIF4A1-223	ENST00000582169	WWC3	Q9ULE0	1092 aa		13.46	□□□□□ -0.25
EIF4A1-223	ENST00000582169	NOP58	Q9Y2X3	529 aa	Known RBP	13.46	□□□□□ -0.25
EIF4A1-223	ENST00000582169	TAF1	P21675	1872 aa		13.46	□□□□□ -0.26
EIF4A1-223	ENST00000582169	KDM2B	Q8NHM5	1336 aa		13.45	□□□□□ -0.26
EIF4A1-223	ENST00000582169	PPEF1	O14829	653 aa	Predicted RBP	13.45	□□□□□ -0.26
EIF4A1-223	ENST00000582169	PTPN12	Q05209	780 aa	Known RBP	13.45	□□□□□ -0.26
EIF4A1-223	ENST00000582169	GRAP	Q13588	217 aa		13.45	□□□□□ -0.26
EIF4A1-223	ENST00000582169	FAM161A	Q3B820	660 aa		13.45	□□□□□ -0.26
EIF4A1-223	ENST00000582169	GRAPL	Q8TC17	118 aa	Predicted RBP	13.45	□□□□□ -0.26
EIF4A1-223	ENST00000582169	DCTPP1	Q9H773	170 aa		13.45	□□□□□ -0.26
EIF4A1-223	ENST00000582169	COPRS	Q9NQ92	184 aa		13.45	□□□□□ -0.26
EIF4A1-223	ENST00000582169	CHMP3	Q9Y3E7	222 aa		13.45	□□□□□ -0.26
EIF4A1-223	ENST00000582169	LRRC37A	A6NMS7	1700 aa		13.44	□□□□□ -0.26
EIF4A1-223	ENST00000582169	SLX4	Q8IY92	1834 aa		13.44	□□□□□ -0.26
EIF4A1-223	ENST00000582169	HMMR	O75330	724 aa		13.44	□□□□□ -0.26
EIF4A1-223	ENST00000582169	ITGA6	P23229	1130 aa		13.44	□□□□□ -0.26
EIF4A1-223	ENST00000582169	SMC5	Q8IY18	1101 aa		13.44	□□□□□ -0.26
EIF4A1-223	ENST00000582169	SEC31B	Q9NQW1	1179 aa		13.44	□□□□□ -0.26
EIF4A1-223	ENST00000582169	BBOX1	O75936	387 aa		13.43	□□□□□ -0.26
EIF4A1-223	ENST00000582169	GRIPAP1	Q4V328	841 aa		13.43	□□□□□ -0.26
EIF4A1-223	ENST00000582169	CCDC93	Q567U6	631 aa		13.43	□□□□□ -0.26
EIF4A1-223	ENST00000582169	CC2D2B	Q6DHV5	1058 aa		13.43	□□□□□ -0.26
EIF4A1-223	ENST00000582169	CCDC85A	Q96PX6	553 aa	Predicted RBP	13.43	□□□□□ -0.26
EIF4A1-223	ENST00000582169	RWDD1	Q9H446	243 aa	Predicted RBP	13.43	□□□□□ -0.26
EIF4A1-223	ENST00000582169	SPEF2	Q9C093	1822 aa		13.43	□□□□□ -0.26
EIF4A1-223	ENST00000582169	ANKRD18B	A2A2Z9	1011 aa		13.42	□□□□□ -0.26
EIF4A1-223	ENST00000582169	YBX3	P16989	372 aa	Known RBP eCLIP	13.42	□□□□□ -0.26	6e-10	■□□□□ 10.3
EIF4A1-223	ENST00000582169	IGHMBP2	P38935	993 aa	Known RBP	13.42	□□□□□ -0.26
EIF4A1-223	ENST00000582169	IFIT5	Q13325	482 aa	Known RBP	13.42	□□□□□ -0.26
EIF4A1-223	ENST00000582169	CCDC57	Q2TAC2	916 aa		13.42	□□□□□ -0.26
EIF4A1-223	ENST00000582169	TAF7L	Q5H9L4	462 aa		13.42	□□□□□ -0.26
EIF4A1-223	ENST00000582169	B4GALNT3	Q6L9W6	998 aa		13.42	□□□□□ -0.26
EIF4A1-223	ENST00000582169	ANKRD18A	Q8IVF6	992 aa		13.42	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms