RNA–Protein interactions for RNA: ENST00000581963.1

CDK12-207, Transcript of cyclin dependent kinase 12, humanhuman

TSL 3

Gene CDK12, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK12-207ENST00000581963 PARP10Q53GL7 1025 aa8.13□□□□□ -1.11
CDK12-207ENST00000581963 SLC10A5Q5PT55 438 aa8.13□□□□□ -1.11
CDK12-207ENST00000581963 PPP1R42Q7Z4L9 355 aa8.13□□□□□ -1.11
CDK12-207ENST00000581963 TRPM4Q8TD43 1214 aa8.13□□□□□ -1.11
CDK12-207ENST00000581963 NLRP3Q96P20 1036 aa8.13□□□□□ -1.11
CDK12-207ENST00000581963 PLEKHF1Q96S99 279 aa8.13□□□□□ -1.11
CDK12-207ENST00000581963 MCOLN1Q9GZU1 580 aa8.13□□□□□ -1.11
CDK12-207ENST00000581963 VPS33BQ9H267 617 aa8.13□□□□□ -1.11
CDK12-207ENST00000581963 PGAP2Q9UHJ9 254 aa8.13□□□□□ -1.11
CDK12-207ENST00000581963 YDJCA8MPS7 323 aa8.12□□□□□ -1.11
CDK12-207ENST00000581963 ANXA1P04083 346 aa8.12□□□□□ -1.11
CDK12-207ENST00000581963 BRPF1P55201 1214 aaPredicted RBP8.12□□□□□ -1.11
CDK12-207ENST00000581963 NFE2L2Q16236 605 aa8.12□□□□□ -1.11
CDK12-207ENST00000581963 PROSER3Q2NL68 480 aa8.12□□□□□ -1.11
CDK12-207ENST00000581963 CIAPIN1Q6FI81 312 aa8.12□□□□□ -1.11
CDK12-207ENST00000581963 HHIPL1Q96JK4 782 aa8.12□□□□□ -1.11
CDK12-207ENST00000581963 ZIC5Q96T25 663 aa8.12□□□□□ -1.11
CDK12-207ENST00000581963 ZNF646O15015 1829 aaPredicted RBP8.11□□□□□ -1.11
CDK12-207ENST00000581963 CA12O43570 354 aa8.11□□□□□ -1.11
CDK12-207ENST00000581963 RAD17O75943 681 aa8.11□□□□□ -1.11
CDK12-207ENST00000581963 DLK2Q6UY11 383 aa8.11□□□□□ -1.11
CDK12-207ENST00000581963 DPP8Q6V1X1 898 aaPredicted RBP8.11□□□□□ -1.11
CDK12-207ENST00000581963 SP8Q8IXZ3 490 aa8.11□□□□□ -1.11
CDK12-207ENST00000581963 MPNDQ8N594 471 aa8.11□□□□□ -1.11
CDK12-207ENST00000581963 SUPT20HQ8NEM7 779 aa8.11□□□□□ -1.11
CDK12-207ENST00000581963 ZC3H15Q8WU90 426 aaKnown RBP8.11□□□□□ -1.11
CDK12-207ENST00000581963 UTP14AQ9BVJ6 771 aaKnown RBP8.11□□□□□ -1.11
CDK12-207ENST00000581963 BCL2L13Q9BXK5 485 aa8.11□□□□□ -1.11
CDK12-207ENST00000581963 ZNF408Q9H9D4 720 aa8.11□□□□□ -1.11
CDK12-207ENST00000581963 SPEF2Q9C093 1822 aa8.1□□□□□ -1.11
CDK12-207ENST00000581963 BBOX1O75936 387 aa8.1□□□□□ -1.11
CDK12-207ENST00000581963 HCLS1P14317 486 aaPredicted RBP8.1□□□□□ -1.11
CDK12-207ENST00000581963 DGKZQ13574 1117 aa8.1□□□□□ -1.11
CDK12-207ENST00000581963 CDC37L1Q7L3B6 337 aa8.1□□□□□ -1.11
CDK12-207ENST00000581963 NLRP10Q86W26 655 aa8.1□□□□□ -1.11
CDK12-207ENST00000581963 TMX4Q9H1E5 349 aaPredicted RBP8.1□□□□□ -1.11
CDK12-207ENST00000581963 CNOT7Q9UIV1 285 aaKnown RBP8.1□□□□□ -1.11
CDK12-207ENST00000581963 MYH3P11055 1940 aa8.09□□□□□ -1.11
CDK12-207ENST00000581963 FAM155AB1AL88 458 aaPredicted RBP8.09□□□□□ -1.11
CDK12-207ENST00000581963 EGFRP00533 1210 aa8.09□□□□□ -1.11
CDK12-207ENST00000581963 NEFMP07197 916 aa8.09□□□□□ -1.11
CDK12-207ENST00000581963 EIF2S2P20042 333 aaKnown RBP8.09□□□□□ -1.11
CDK12-207ENST00000581963 HUNKP57058 714 aa8.09□□□□□ -1.11
CDK12-207ENST00000581963 NOGQ13253 232 aa8.09□□□□□ -1.11
CDK12-207ENST00000581963 GRAPQ13588 217 aa8.09□□□□□ -1.11
CDK12-207ENST00000581963 TNIP1Q15025 636 aa8.09□□□□□ -1.11
CDK12-207ENST00000581963 USP48Q86UV5 1035 aa8.09□□□□□ -1.11
CDK12-207ENST00000581963 MICALL2Q8IY33 904 aa8.09□□□□□ -1.11
CDK12-207ENST00000581963 GRAPLQ8TC17 118 aaPredicted RBP8.09□□□□□ -1.11
CDK12-207ENST00000581963 CFAP44Q96MT7 982 aa8.09□□□□□ -1.11
CDK12-207ENST00000581963 TSPYL4Q9UJ04 414 aa8.09□□□□□ -1.11
CDK12-207ENST00000581963 SH3TC1Q8TE82 1336 aa8.08□□□□□ -1.12
CDK12-207ENST00000581963 PSMD14O00487 310 aa8.08□□□□□ -1.12
CDK12-207ENST00000581963 DDX46Q7L014 1031 aaKnown RBP8.08□□□□□ -1.12
CDK12-207ENST00000581963 COPS6Q7L5N1 327 aa8.08□□□□□ -1.12
CDK12-207ENST00000581963 SAMD7Q7Z3H4 446 aa8.08□□□□□ -1.12
CDK12-207ENST00000581963 XAGE3Q8WTP9 111 aa8.08□□□□□ -1.12
CDK12-207ENST00000581963 DPF2Q92785 391 aa8.08□□□□□ -1.12
CDK12-207ENST00000581963 ZNF428Q96B54 188 aa8.08□□□□□ -1.12
CDK12-207ENST00000581963 TRMT112Q9UI30 125 aaKnown RBP8.08□□□□□ -1.12
CDK12-207ENST00000581963 ZBTB12Q9Y330 459 aaPredicted RBP8.08□□□□□ -1.12
CDK12-207ENST00000581963 RTL9Q8NET4 1388 aa8.08□□□□□ -1.12
CDK12-207ENST00000581963 PAPPA2Q9BXP8 1791 aa8.07□□□□□ -1.12
CDK12-207ENST00000581963 MAPK8IP3Q9UPT6 1336 aa8.07□□□□□ -1.12
CDK12-207ENST00000581963 ADM5C9JUS6 153 aa8.07□□□□□ -1.12
CDK12-207ENST00000581963 H7C1D1 291 aa8.07□□□□□ -1.12
CDK12-207ENST00000581963 AIMP1Q12904 312 aaKnown RBP8.07□□□□□ -1.12
CDK12-207ENST00000581963 TCIRG1Q13488 830 aa8.07□□□□□ -1.12
CDK12-207ENST00000581963 TBC1D10BQ4KMP7 808 aaPredicted RBP8.07□□□□□ -1.12
CDK12-207ENST00000581963 HSP90AB3PQ58FF7 597 aa8.07□□□□□ -1.12
CDK12-207ENST00000581963 RGMBQ6NW40 437 aa8.07□□□□□ -1.12
CDK12-207ENST00000581963 TMC4Q7Z404 712 aa8.07□□□□□ -1.12
CDK12-207ENST00000581963 NECTIN2Q92692 538 aa8.07□□□□□ -1.12
CDK12-207ENST00000581963 CELF1Q92879 486 aaKnown RBP8.07□□□□□ -1.12
CDK12-207ENST00000581963 DBNDD1Q9H9R9 158 aa8.07□□□□□ -1.12
CDK12-207ENST00000581963 GBA2Q9HCG7 927 aaPredicted RBP8.07□□□□□ -1.12
CDK12-207ENST00000581963 KCNQ5Q9NR82 932 aa8.07□□□□□ -1.12
CDK12-207ENST00000581963 RIMBP2O15034 1052 aa8.06□□□□□ -1.12
CDK12-207ENST00000581963 ECE2O60344 883 aa8.06□□□□□ -1.12
CDK12-207ENST00000581963 KRT24Q2M2I5 525 aa8.06□□□□□ -1.12
CDK12-207ENST00000581963 WASHC4Q2M389 1173 aa8.06□□□□□ -1.12
CDK12-207ENST00000581963 KRT26Q7Z3Y9 468 aa8.06□□□□□ -1.12
CDK12-207ENST00000581963 BABAM1Q9NWV8 329 aa8.06□□□□□ -1.12
CDK12-207ENST00000581963 SAGE1Q9NXZ1 904 aa8.06□□□□□ -1.12
CDK12-207ENST00000581963 POLLQ9UGP5 575 aa8.06□□□□□ -1.12
CDK12-207ENST00000581963 ASTN2O75129 1339 aaPredicted RBP8.05□□□□□ -1.12
CDK12-207ENST00000581963 LAMB1P07942 1786 aa8.05□□□□□ -1.12
CDK12-207ENST00000581963 RPS12P25398 132 aaKnown RBP8.05□□□□□ -1.12
CDK12-207ENST00000581963 SOX10P56693 466 aa8.05□□□□□ -1.12
CDK12-207ENST00000581963 RIPK4P57078 832 aa8.05□□□□□ -1.12
CDK12-207ENST00000581963 GPSM2P81274 684 aa8.05□□□□□ -1.12
CDK12-207ENST00000581963 KIF23Q02241 960 aaPredicted RBP8.05□□□□□ -1.12
CDK12-207ENST00000581963 SF3B3Q15393 1217 aaKnown RBP8.05□□□□□ -1.12
CDK12-207ENST00000581963 DOK7Q18PE1 504 aa8.05□□□□□ -1.12
CDK12-207ENST00000581963 FAM89AQ96GI7 184 aa8.05□□□□□ -1.12
CDK12-207ENST00000581963 RNF186Q9NXI6 227 aa8.05□□□□□ -1.12
CDK12-207ENST00000581963 CHPF2Q9P2E5 772 aa8.05□□□□□ -1.12
CDK12-207ENST00000581963 NSFL1CQ9UNZ2 370 aaKnown RBP8.05□□□□□ -1.12
CDK12-207ENST00000581963 ZNF609O15014 1411 aa8.04□□□□□ -1.12
CDK12-207ENST00000581963 ECM29Q5VYK3 1845 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms