RNA–Protein interactions for RNA: ENST00000581298.5

SNX11-208, Transcript of sorting nexin 11, humanhuman

TSL 5

Gene SNX11, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-208ENST00000581298 SYNE4Q8N205 404 aa9.25□□□□□ -0.93
SNX11-208ENST00000581298 ZBTB38Q8NAP3 1195 aaPredicted RBP9.25□□□□□ -0.93
SNX11-208ENST00000581298 GRAPLQ8TC17 118 aaPredicted RBP9.25□□□□□ -0.93
SNX11-208ENST00000581298 RPGRQ92834 1020 aaKnown RBP9.25□□□□□ -0.93
SNX11-208ENST00000581298 ABHD8Q96I13 439 aa9.25□□□□□ -0.93
SNX11-208ENST00000581298 RRAGCQ9HB90 399 aa9.25□□□□□ -0.93
SNX11-208ENST00000581298 TRMT112Q9UI30 125 aaKnown RBP9.25□□□□□ -0.93
SNX11-208ENST00000581298 ANKRD36CQ5JPF3 1778 aa9.24□□□□□ -0.93
SNX11-208ENST00000581298 CCER2I3L3R5 266 aa9.24□□□□□ -0.93
SNX11-208ENST00000581298 DDX58O95786 925 aaKnown RBP9.24□□□□□ -0.93
SNX11-208ENST00000581298 PCCAP05165 728 aaPredicted RBP9.24□□□□□ -0.93
SNX11-208ENST00000581298 HCLS1P14317 486 aaPredicted RBP9.24□□□□□ -0.93
SNX11-208ENST00000581298 HSP90B1P14625 803 aaKnown RBP9.24□□□□□ -0.93
SNX11-208ENST00000581298 IARSP41252 1262 aaKnown RBP9.24□□□□□ -0.93
SNX11-208ENST00000581298 OLFM4Q6UX06 510 aa9.24□□□□□ -0.93
SNX11-208ENST00000581298 TSR2Q969E8 191 aaKnown RBP9.24□□□□□ -0.93
SNX11-208ENST00000581298 ABCC4O15439 1325 aa9.24□□□□□ -0.93
SNX11-208ENST00000581298 CDHR2Q9BYE9 1310 aa9.24□□□□□ -0.93
SNX11-208ENST00000581298 FANCIQ9NVI1 1328 aa9.24□□□□□ -0.93
SNX11-208ENST00000581298 ATP5J2-PTCD1G3V325 749 aa9.23□□□□□ -0.93
SNX11-208ENST00000581298 PPEF1O14829 653 aaPredicted RBP9.23□□□□□ -0.93
SNX11-208ENST00000581298 IGKV5-2P06315 115 aa9.23□□□□□ -0.93
SNX11-208ENST00000581298 RIC3Q7Z5B4 369 aa9.23□□□□□ -0.93
SNX11-208ENST00000581298 FAM89AQ96GI7 184 aa9.23□□□□□ -0.93
SNX11-208ENST00000581298 ZNF277Q9NRM2 450 aaPredicted RBP9.23□□□□□ -0.93
SNX11-208ENST00000581298 CCDC88AQ3V6T2 1871 aa9.23□□□□□ -0.93
SNX11-208ENST00000581298 PI4KAP2A4QPH2 592 aa9.22□□□□□ -0.93
SNX11-208ENST00000581298 H7C1W4 665 aa9.22□□□□□ -0.93
SNX11-208ENST00000581298 IRS4O14654 1257 aaPredicted RBP9.22□□□□□ -0.93
SNX11-208ENST00000581298 FOXN1O15353 648 aa9.22□□□□□ -0.93
SNX11-208ENST00000581298 DDNO94850 711 aaPredicted RBP9.22□□□□□ -0.93
SNX11-208ENST00000581298 DDX46Q7L014 1031 aaKnown RBP9.22□□□□□ -0.93
SNX11-208ENST00000581298 PI4KAP1Q8N8J0 262 aa9.22□□□□□ -0.93
SNX11-208ENST00000581298 SMC1BQ8NDV3 1235 aa9.22□□□□□ -0.93
SNX11-208ENST00000581298 PLA2G12BQ9BX93 195 aa9.22□□□□□ -0.93
SNX11-208ENST00000581298 STK31Q9BXU1 1019 aa9.22□□□□□ -0.93
SNX11-208ENST00000581298 CACNA1FO60840 1977 aa9.21□□□□□ -0.93
SNX11-208ENST00000581298 PDE8AO60658 829 aa9.21□□□□□ -0.94
SNX11-208ENST00000581298 MYCNP04198 464 aaPredicted RBP9.21□□□□□ -0.94
SNX11-208ENST00000581298 CTCFP49711 727 aaPredicted RBP9.21□□□□□ -0.94
SNX11-208ENST00000581298 CASP7P55210 303 aa9.21□□□□□ -0.94
SNX11-208ENST00000581298 EXOSC9Q06265 439 aaKnown RBP9.21□□□□□ -0.94
SNX11-208ENST00000581298 KIAA2012Q0VF49 1180 aa9.21□□□□□ -0.94
SNX11-208ENST00000581298 FLIIQ13045 1269 aa9.21□□□□□ -0.94
SNX11-208ENST00000581298 G2E3Q7L622 706 aa9.21□□□□□ -0.94
SNX11-208ENST00000581298 TRMT2AQ8IZ69 625 aaKnown RBP9.21□□□□□ -0.94
SNX11-208ENST00000581298 FAM9BQ8IZU0 186 aa9.21□□□□□ -0.94
SNX11-208ENST00000581298 GPC2Q8N158 579 aa9.21□□□□□ -0.94
SNX11-208ENST00000581298 SUPT20HQ8NEM7 779 aa9.21□□□□□ -0.94
SNX11-208ENST00000581298 SP7Q8TDD2 431 aaPredicted RBP9.21□□□□□ -0.94
SNX11-208ENST00000581298 MYD88Q99836 296 aa9.21□□□□□ -0.94
SNX11-208ENST00000581298 MYH16Q9H6N6 1097 aa9.21□□□□□ -0.94
SNX11-208ENST00000581298 CWC25Q9NXE8 425 aaPredicted RBP9.21□□□□□ -0.94
SNX11-208ENST00000581298 PODXL2Q9NZ53 605 aa9.21□□□□□ -0.94
SNX11-208ENST00000581298 MAP3K2Q9Y2U5 619 aa9.21□□□□□ -0.94
SNX11-208ENST00000581298 RTL9Q8NET4 1388 aa9.21□□□□□ -0.94
SNX11-208ENST00000581298 COL4A5P29400 1685 aa9.2□□□□□ -0.94
SNX11-208ENST00000581298 IQCA1LA6NCM1 817 aa9.2□□□□□ -0.94
SNX11-208ENST00000581298 NEURL1BA8MQ27 555 aa9.2□□□□□ -0.94
SNX11-208ENST00000581298 RPS8P62241 208 aaKnown RBP9.2□□□□□ -0.94
SNX11-208ENST00000581298 SLC51AQ86UW1 340 aa9.2□□□□□ -0.94
SNX11-208ENST00000581298 MPNDQ8N594 471 aa9.2□□□□□ -0.94
SNX11-208ENST00000581298 JDP2Q8WYK2 163 aa9.2□□□□□ -0.94
SNX11-208ENST00000581298 CELF1Q92879 486 aaKnown RBP9.2□□□□□ -0.94
SNX11-208ENST00000581298 TAF1DQ9H5J8 278 aaPredicted RBP9.2□□□□□ -0.94
SNX11-208ENST00000581298 ZNF541Q9H0D2 1346 aa9.2□□□□□ -0.94
SNX11-208ENST00000581298 TIAM2Q8IVF5 1701 aa9.19□□□□□ -0.94
SNX11-208ENST00000581298 DDX60Q8IY21 1712 aaKnown RBP9.19□□□□□ -0.94
SNX11-208ENST00000581298 CSF1RP07333 972 aa9.19□□□□□ -0.94
SNX11-208ENST00000581298 LINS1Q8NG48 757 aa9.19□□□□□ -0.94
SNX11-208ENST00000581298 DNAAF4Q8WXU2 420 aa9.19□□□□□ -0.94
SNX11-208ENST00000581298 ZNF428Q96B54 188 aa9.19□□□□□ -0.94
SNX11-208ENST00000581298 LAMB2P55268 1798 aa9.19□□□□□ -0.94
SNX11-208ENST00000581298 CCDC85CA6NKD9 419 aa9.18□□□□□ -0.94
SNX11-208ENST00000581298 LRRC37AA6NMS7 1700 aa9.18□□□□□ -0.94
SNX11-208ENST00000581298 E9PSI1 815 aa9.18□□□□□ -0.94
SNX11-208ENST00000581298 SCN4AP35499 1836 aa9.18□□□□□ -0.94
SNX11-208ENST00000581298 EIF6P56537 245 aaKnown RBP9.18□□□□□ -0.94
SNX11-208ENST00000581298 SLFN5Q08AF3 891 aa9.18□□□□□ -0.94
SNX11-208ENST00000581298 NEXNQ0ZGT2 675 aa9.18□□□□□ -0.94
SNX11-208ENST00000581298 CACNA1SQ13698 1873 aa9.18□□□□□ -0.94
SNX11-208ENST00000581298 GCKRQ14397 625 aa9.18□□□□□ -0.94
SNX11-208ENST00000581298 CCDC152Q4G0S7 254 aa9.18□□□□□ -0.94
SNX11-208ENST00000581298 DPP8Q6V1X1 898 aaPredicted RBP9.18□□□□□ -0.94
SNX11-208ENST00000581298 LARGE2Q8N3Y3 721 aa9.18□□□□□ -0.94
SNX11-208ENST00000581298 TTLL11Q8NHH1 800 aa9.18□□□□□ -0.94
SNX11-208ENST00000581298 TMX4Q9H1E5 349 aaPredicted RBP9.18□□□□□ -0.94
SNX11-208ENST00000581298 DUOX1Q9NRD9 1551 aa9.18□□□□□ -0.94
SNX11-208ENST00000581298 ZNRF3Q9ULT6 936 aa9.18□□□□□ -0.94
SNX11-208ENST00000581298 PASKQ96RG2 1323 aa9.17□□□□□ -0.94
SNX11-208ENST00000581298 PPIP5K2O43314 1243 aa9.17□□□□□ -0.94
SNX11-208ENST00000581298 BRPF1P55201 1214 aaPredicted RBP9.17□□□□□ -0.94
SNX11-208ENST00000581298 CTSWP56202 376 aa9.17□□□□□ -0.94
SNX11-208ENST00000581298 BEND3Q5T5X7 828 aa9.17□□□□□ -0.94
SNX11-208ENST00000581298 CHADLQ6NUI6 762 aa9.17□□□□□ -0.94
SNX11-208ENST00000581298 PNMA8AQ86V59 439 aaPredicted RBP9.17□□□□□ -0.94
SNX11-208ENST00000581298 LDHDQ86WU2 507 aa9.17□□□□□ -0.94
SNX11-208ENST00000581298 SEC31BQ9NQW1 1179 aa9.17□□□□□ -0.94
SNX11-208ENST00000581298 POLLQ9UGP5 575 aa9.17□□□□□ -0.94
SNX11-208ENST00000581298 HACL1Q9UJ83 578 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms