RNA–Protein interactions for RNA: ENST00000581161.5

RTTN-206, Transcript of rotatin, humanhuman

TSL 1 (best)

Gene RTTN, Length 6,722 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-206ENST00000581161 CEP112Q8N8E3 955 aa4.97□□□□□ -1.61
RTTN-206ENST00000581161 PXDNQ92626 1479 aa4.97□□□□□ -1.61
RTTN-206ENST00000581161 LRP6O75581 1613 aa4.97□□□□□ -1.61
RTTN-206ENST00000581161 SULT6B1Q6IMI4 303 aa4.97□□□□□ -1.61
RTTN-206ENST00000581161 USP48Q86UV5 1035 aa4.97□□□□□ -1.61
RTTN-206ENST00000581161 DISP2A7MBM2 1401 aa4.97□□□□□ -1.61
RTTN-206ENST00000581161 NPHP4O75161 1426 aaPredicted RBP4.97□□□□□ -1.61
RTTN-206ENST00000581161 VPS37CA5D8V6 355 aaPredicted RBP4.96□□□□□ -1.61
RTTN-206ENST00000581161 ADCY5O95622 1261 aa4.96□□□□□ -1.61
RTTN-206ENST00000581161 PAXIP1Q6ZW49 1069 aaPredicted RBP4.96□□□□□ -1.61
RTTN-206ENST00000581161 IL1RAPL2Q9NP60 686 aa4.96□□□□□ -1.61
RTTN-206ENST00000581161 TSPYL4Q9UJ04 414 aa4.96□□□□□ -1.61
RTTN-206ENST00000581161 CCDC6Q16204 474 aa4.96□□□□□ -1.62
RTTN-206ENST00000581161 AEBP1Q8IUX7 1158 aa4.96□□□□□ -1.62
RTTN-206ENST00000581161 LRRCC1Q9C099 1032 aa4.96□□□□□ -1.62
RTTN-206ENST00000581161 TTC12Q9H892 705 aaPredicted RBP4.96□□□□□ -1.62
RTTN-206ENST00000581161 CNPY2Q9Y2B0 182 aa4.96□□□□□ -1.62
RTTN-206ENST00000581161 ZDHHC9Q9Y397 364 aa4.96□□□□□ -1.62
RTTN-206ENST00000581161 WDR33Q9C0J8 1336 aaKnown RBP4.96□□□□□ -1.62
RTTN-206ENST00000581161 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP4.96□□□□□ -1.62
RTTN-206ENST00000581161 DTNBO60941 627 aa4.96□□□□□ -1.62
RTTN-206ENST00000581161 TXLNAP40222 546 aa4.96□□□□□ -1.62
RTTN-206ENST00000581161 PDE1AP54750 535 aa4.96□□□□□ -1.62
RTTN-206ENST00000581161 MLECQ14165 292 aa4.96□□□□□ -1.62
RTTN-206ENST00000581161 SMC3Q9UQE7 1217 aa4.96□□□□□ -1.62
RTTN-206ENST00000581161 TBX22Q9Y458 520 aa4.96□□□□□ -1.62
RTTN-206ENST00000581161 KIAA1551Q9HCM1 1747 aa4.96□□□□□ -1.62
RTTN-206ENST00000581161 MCM2P49736 904 aa4.96□□□□□ -1.62
RTTN-206ENST00000581161 TERF1P54274 439 aa4.96□□□□□ -1.62
RTTN-206ENST00000581161 PPP4R3BQ5MIZ7 849 aa4.96□□□□□ -1.62
RTTN-206ENST00000581161 TSNARE1Q96NA8 513 aa4.96□□□□□ -1.62
RTTN-206ENST00000581161 CCDC94Q9BW85 323 aaPredicted RBP4.96□□□□□ -1.62
RTTN-206ENST00000581161 HCLS1P14317 486 aaPredicted RBP4.96□□□□□ -1.62
RTTN-206ENST00000581161 HMGB2P26583 209 aaKnown RBP4.96□□□□□ -1.62
RTTN-206ENST00000581161 EIF2AK3Q9NZJ5 1116 aaKnown RBP4.96□□□□□ -1.62
RTTN-206ENST00000581161 PALD1Q9ULE6 856 aa4.96□□□□□ -1.62
RTTN-206ENST00000581161 ARHGEF10O15013 1369 aa4.96□□□□□ -1.62
RTTN-206ENST00000581161 ZBTB24O43167 697 aaPredicted RBP4.95□□□□□ -1.62
RTTN-206ENST00000581161 KIAA0754O94854 1291 aa4.95□□□□□ -1.62
RTTN-206ENST00000581161 NOLC1Q14978 699 aaKnown RBP eCLIP4.95□□□□□ -1.62
RTTN-206ENST00000581161 CEP135Q66GS9 1140 aa4.95□□□□□ -1.62
RTTN-206ENST00000581161 LUC7LQ9NQ29 371 aaKnown RBP4.95□□□□□ -1.62
RTTN-206ENST00000581161 DOCK2Q92608 1830 aa4.95□□□□□ -1.62
RTTN-206ENST00000581161 CCP110O43303 1012 aa4.95□□□□□ -1.62
RTTN-206ENST00000581161 GNAI2P04899 355 aa4.95□□□□□ -1.62
RTTN-206ENST00000581161 CETN2P41208 172 aa4.95□□□□□ -1.62
RTTN-206ENST00000581161 BIRC2Q13490 618 aa4.95□□□□□ -1.62
RTTN-206ENST00000581161 CACYBPQ9HB71 228 aaKnown RBP4.95□□□□□ -1.62
RTTN-206ENST00000581161 COL16A1Q07092 1604 aaPredicted RBP4.95□□□□□ -1.62
RTTN-206ENST00000581161 FAM193AP78312 1265 aa4.95□□□□□ -1.62
RTTN-206ENST00000581161 DAAM2Q86T65 1068 aa4.95□□□□□ -1.62
RTTN-206ENST00000581161 PDILTQ8N807 584 aa4.95□□□□□ -1.62
RTTN-206ENST00000581161 PIBF1Q8WXW3 757 aa4.95□□□□□ -1.62
RTTN-206ENST00000581161 ZNF592Q92610 1267 aa4.95□□□□□ -1.62
RTTN-206ENST00000581161 ESYT1Q9BSJ8 1104 aa4.95□□□□□ -1.62
RTTN-206ENST00000581161 NRAPQ86VF7 1730 aa4.95□□□□□ -1.62
RTTN-206ENST00000581161 COL4A1P02462 1669 aa4.95□□□□□ -1.62
RTTN-206ENST00000581161 SH3BP5O60239 455 aa4.95□□□□□ -1.62
RTTN-206ENST00000581161 CA8P35219 290 aa4.95□□□□□ -1.62
RTTN-206ENST00000581161 MATR3P43243 847 aaKnown RBP eCLIP4.95□□□□□ -1.62
RTTN-206ENST00000581161 CDK5RAP3Q96JB5 506 aa4.95□□□□□ -1.62
RTTN-206ENST00000581161 PDLIM2Q96JY6 352 aa4.95□□□□□ -1.62
RTTN-206ENST00000581161 SMC6Q96SB8 1091 aa4.95□□□□□ -1.62
RTTN-206ENST00000581161 PODXL2Q9NZ53 605 aa4.95□□□□□ -1.62
RTTN-206ENST00000581161 ATP6V1DQ9Y5K8 247 aa4.95□□□□□ -1.62
RTTN-206ENST00000581161 ANKRD36CQ5JPF3 1778 aa4.95□□□□□ -1.62
RTTN-206ENST00000581161 CAMK4Q16566 473 aa4.95□□□□□ -1.62
RTTN-206ENST00000581161 CCDC183Q5T5S1 534 aa4.95□□□□□ -1.62
RTTN-206ENST00000581161 DDX54Q8TDD1 881 aaKnown RBP4.95□□□□□ -1.62
RTTN-206ENST00000581161 BRD1O95696 1058 aa4.94□□□□□ -1.62
RTTN-206ENST00000581161 PPP4R3AQ6IN85 833 aa4.94□□□□□ -1.62
RTTN-206ENST00000581161 TXNDC2Q86VQ3 553 aa4.94□□□□□ -1.62
RTTN-206ENST00000581161 PDCL2Q8N4E4 241 aa4.94□□□□□ -1.62
RTTN-206ENST00000581161 IGSF1Q8N6C5 1336 aa4.94□□□□□ -1.62
RTTN-206ENST00000581161 LTBP1Q14766 1721 aa4.94□□□□□ -1.62
RTTN-206ENST00000581161 KRT18P05783 430 aaKnown RBP4.94□□□□□ -1.62
RTTN-206ENST00000581161 CCT4P50991 539 aaKnown RBP4.94□□□□□ -1.62
RTTN-206ENST00000581161 KCNB2Q92953 911 aa4.94□□□□□ -1.62
RTTN-206ENST00000581161 FERMT2Q96AC1 680 aa4.94□□□□□ -1.62
RTTN-206ENST00000581161 SRCIN1Q9C0H9 1055 aa4.94□□□□□ -1.62
RTTN-206ENST00000581161 SETD1BQ9UPS6 1966 aaKnown RBP4.94□□□□□ -1.62
RTTN-206ENST00000581161 PRC1O43663 620 aa4.94□□□□□ -1.62
RTTN-206ENST00000581161 LETM1O95202 739 aaPredicted RBP4.94□□□□□ -1.62
RTTN-206ENST00000581161 SAFBQ15424 915 aaKnown RBP eCLIP4.94□□□□□ -1.62
RTTN-206ENST00000581161 GIMAP6Q6P9H5 292 aa4.94□□□□□ -1.62
RTTN-206ENST00000581161 NCKAP5LQ9HCH0 1330 aa4.94□□□□□ -1.62
RTTN-206ENST00000581161 KCPQ6ZWJ8 1503 aa4.94□□□□□ -1.62
RTTN-206ENST00000581161 NHSQ6T4R5 1651 aa4.94□□□□□ -1.62
RTTN-206ENST00000581161 XBP1P17861 261 aa4.94□□□□□ -1.62
RTTN-206ENST00000581161 SMAP1Q8IYB5 467 aaPredicted RBP4.94□□□□□ -1.62
RTTN-206ENST00000581161 MAGEC2Q9UBF1 373 aaPredicted RBP4.94□□□□□ -1.62
RTTN-206ENST00000581161 LAMB2P55268 1798 aa4.94□□□□□ -1.62
RTTN-206ENST00000581161 SPEF2Q9C093 1822 aa4.94□□□□□ -1.62
RTTN-206ENST00000581161 SURF6O75683 361 aaKnown RBP4.94□□□□□ -1.62
RTTN-206ENST00000581161 G2E3Q7L622 706 aa4.94□□□□□ -1.62
RTTN-206ENST00000581161 RSPH3Q86UC2 560 aa4.94□□□□□ -1.62
RTTN-206ENST00000581161 THEMISQ8N1K5 641 aaPredicted RBP4.94□□□□□ -1.62
RTTN-206ENST00000581161 SCLT1Q96NL6 688 aa4.94□□□□□ -1.62
RTTN-206ENST00000581161 FERMT1Q9BQL6 677 aa4.94□□□□□ -1.62
RTTN-206ENST00000581161 AKAP11Q9UKA4 1901 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms