RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 RBM17Q96I25 401 aaKnown RBP17.82■□□□□ 0.44
SKA2-205ENST00000580541 CHMP3Q9Y3E7 222 aa17.82■□□□□ 0.44
SKA2-205ENST00000580541 ALDH1B1P30837 517 aa17.81■□□□□ 0.44
SKA2-205ENST00000580541 ATP8B2P98198 1209 aa17.81■□□□□ 0.44
SKA2-205ENST00000580541 IFIT5Q13325 482 aaKnown RBP17.81■□□□□ 0.44
SKA2-205ENST00000580541 CCDC24Q8N4L8 307 aa17.81■□□□□ 0.44
SKA2-205ENST00000580541 ANKRD18BA2A2Z9 1011 aa17.8■□□□□ 0.44
SKA2-205ENST00000580541 NPR1P16066 1061 aa17.8■□□□□ 0.44
SKA2-205ENST00000580541 MTX1Q13505 466 aa17.8■□□□□ 0.44
SKA2-205ENST00000580541 TAF7LQ5H9L4 462 aa17.8■□□□□ 0.44
SKA2-205ENST00000580541 MASTLQ96GX5 879 aa17.8■□□□□ 0.44
SKA2-205ENST00000580541 CDC5LQ99459 802 aaKnown RBP17.8■□□□□ 0.44
SKA2-205ENST00000580541 ABCC12Q96J65 1359 aa17.79■□□□□ 0.44
SKA2-205ENST00000580541 MYH3P11055 1940 aa17.79■□□□□ 0.44
SKA2-205ENST00000580541 SRGAP3O43295 1099 aa17.79■□□□□ 0.44
SKA2-205ENST00000580541 CRY2Q49AN0 593 aa17.79■□□□□ 0.44
SKA2-205ENST00000580541 C2CD5Q86YS7 1000 aa17.79■□□□□ 0.44
SKA2-205ENST00000580541 KAZALD1Q96I82 304 aa17.79■□□□□ 0.44
SKA2-205ENST00000580541 TMX4Q9H1E5 349 aaPredicted RBP17.79■□□□□ 0.44
SKA2-205ENST00000580541 RTL9Q8NET4 1388 aa17.79■□□□□ 0.44
SKA2-205ENST00000580541 SRGNP10124 158 aa17.78■□□□□ 0.44
SKA2-205ENST00000580541 HOXA10P31260 410 aaPredicted RBP17.78■□□□□ 0.44
SKA2-205ENST00000580541 STYK1Q6J9G0 422 aa17.78■□□□□ 0.44
SKA2-205ENST00000580541 ANKRD44Q8N8A2 993 aa17.78■□□□□ 0.44
SKA2-205ENST00000580541 CNKSR1Q969H4 720 aa17.78■□□□□ 0.44
SKA2-205ENST00000580541 CRAMP1Q96RY5 1269 aa17.78■□□□□ 0.44
SKA2-205ENST00000580541 C1orf115Q9H7X2 142 aa17.78■□□□□ 0.44
SKA2-205ENST00000580541 BBOX1O75936 387 aa17.77■□□□□ 0.44
SKA2-205ENST00000580541 ITGA6P23229 1130 aa17.77■□□□□ 0.44
SKA2-205ENST00000580541 IGHMBP2P38935 993 aaKnown RBP17.77■□□□□ 0.44
SKA2-205ENST00000580541 EPHA10Q5JZY3 1008 aa17.77■□□□□ 0.44
SKA2-205ENST00000580541 CEP85Q6P2H3 762 aa17.77■□□□□ 0.44
SKA2-205ENST00000580541 TMC4Q7Z404 712 aa17.77■□□□□ 0.44
SKA2-205ENST00000580541 KLHL34Q8N239 644 aa17.77■□□□□ 0.44
SKA2-205ENST00000580541 ZNF622Q969S3 477 aaKnown RBP eCLIP17.77■□□□□ 0.44
SKA2-205ENST00000580541 RWDD1Q9H446 243 aaPredicted RBP17.77■□□□□ 0.44
SKA2-205ENST00000580541 C10orf71Q711Q0 1435 aa17.77■□□□□ 0.44
SKA2-205ENST00000580541 HSP90AB4PQ58FF6 505 aa17.76■□□□□ 0.43
SKA2-205ENST00000580541 ANKRD18AQ8IVF6 992 aa17.76■□□□□ 0.43
SKA2-205ENST00000580541 MPHOSPH8Q99549 860 aa17.76■□□□□ 0.43
SKA2-205ENST00000580541 GREM2Q9H772 168 aa17.76■□□□□ 0.43
SKA2-205ENST00000580541 FBXO3Q9UK99 471 aa17.76■□□□□ 0.43
SKA2-205ENST00000580541 LAMB2P55268 1798 aa17.76■□□□□ 0.43
SKA2-205ENST00000580541 RPS8P62241 208 aaKnown RBP17.75■□□□□ 0.43
SKA2-205ENST00000580541 SSH3Q8TE77 659 aa17.75■□□□□ 0.43
SKA2-205ENST00000580541 CCDC85AQ96PX6 553 aaPredicted RBP17.75■□□□□ 0.43
SKA2-205ENST00000580541 PIM2Q9P1W9 311 aa17.75■□□□□ 0.43
SKA2-205ENST00000580541 DDX60Q8IY21 1712 aaKnown RBP17.75■□□□□ 0.43
SKA2-205ENST00000580541 GRAPQ13588 217 aa17.74■□□□□ 0.43
SKA2-205ENST00000580541 FAM161AQ3B820 660 aa17.74■□□□□ 0.43
SKA2-205ENST00000580541 GRAPLQ8TC17 118 aaPredicted RBP17.74■□□□□ 0.43
SKA2-205ENST00000580541 G3BP1Q13283 466 aaKnown RBP eCLIP17.73■□□□□ 0.43
SKA2-205ENST00000580541 POLA2Q14181 598 aa17.73■□□□□ 0.43
SKA2-205ENST00000580541 LDHAL6AQ6ZMR3 332 aa17.73■□□□□ 0.43
SKA2-205ENST00000580541 C3orf67Q6ZVT6 689 aa17.73■□□□□ 0.43
SKA2-205ENST00000580541 TTLL6Q8N841 843 aa17.73■□□□□ 0.43
SKA2-205ENST00000580541 COPRSQ9NQ92 184 aa17.73■□□□□ 0.43
SKA2-205ENST00000580541 PCDHB15Q9Y5E8 787 aa17.73■□□□□ 0.43
SKA2-205ENST00000580541 KIF13BQ9NQT8 1826 aa17.72■□□□□ 0.43
SKA2-205ENST00000580541 A0A0G2JLW4 131 aa17.72■□□□□ 0.43
SKA2-205ENST00000580541 PNMA6EA0A0J9YXQ4 647 aa17.72■□□□□ 0.43
SKA2-205ENST00000580541 DPEP1P16444 411 aa17.72■□□□□ 0.43
SKA2-205ENST00000580541 HDAC1Q13547 482 aaPredicted RBP17.72■□□□□ 0.43
SKA2-205ENST00000580541 GRIPAP1Q4V328 841 aa17.72■□□□□ 0.43
SKA2-205ENST00000580541 CNNM1Q9NRU3 951 aa17.72■□□□□ 0.43
SKA2-205ENST00000580541 BSDC1Q9NW68 430 aaPredicted RBP17.72■□□□□ 0.43
SKA2-205ENST00000580541 SURF6O75683 361 aaKnown RBP17.71■□□□□ 0.43
SKA2-205ENST00000580541 CHRNA5P30532 468 aa17.71■□□□□ 0.43
SKA2-205ENST00000580541 ERC1Q8IUD2 1116 aa17.71■□□□□ 0.43
SKA2-205ENST00000580541 FHDC1Q9C0D6 1143 aaPredicted RBP17.71■□□□□ 0.43
SKA2-205ENST00000580541 SEC31BQ9NQW1 1179 aa17.71■□□□□ 0.43
SKA2-205ENST00000580541 PPP4R2Q9NY27 417 aa17.71■□□□□ 0.43
SKA2-205ENST00000580541 ZBTB47Q9UFB7 747 aaPredicted RBP17.71■□□□□ 0.43
SKA2-205ENST00000580541 ANKRD31Q8N7Z5 1873 aa17.71■□□□□ 0.43
SKA2-205ENST00000580541 CIAO1O76071 339 aa17.7■□□□□ 0.42
SKA2-205ENST00000580541 PTPN12Q05209 780 aaKnown RBP17.7■□□□□ 0.42
SKA2-205ENST00000580541 OS9Q13438 667 aaPredicted RBP17.7■□□□□ 0.42
SKA2-205ENST00000580541 DALRD3Q5D0E6 543 aaKnown RBP17.7■□□□□ 0.42
SKA2-205ENST00000580541 SOGA3Q5TF21 947 aa17.7■□□□□ 0.42
SKA2-205ENST00000580541 CC2D2BQ6DHV5 1058 aa17.7■□□□□ 0.42
SKA2-205ENST00000580541 SYT17Q9BSW7 474 aa17.7■□□□□ 0.42
SKA2-205ENST00000580541 RAB11FIP3O75154 756 aa17.69■□□□□ 0.42
SKA2-205ENST00000580541 IL15P40933 162 aaPredicted RBP17.69■□□□□ 0.42
SKA2-205ENST00000580541 RFX5P48382 616 aaPredicted RBP17.69■□□□□ 0.42
SKA2-205ENST00000580541 SIRT2Q8IXJ6 389 aa17.69■□□□□ 0.42
SKA2-205ENST00000580541 SP8Q8IXZ3 490 aa17.69■□□□□ 0.42
SKA2-205ENST00000580541 GCC1Q96CN9 775 aa17.69■□□□□ 0.42
SKA2-205ENST00000580541 CCDC136Q96JN2 1154 aa17.69■□□□□ 0.42
SKA2-205ENST00000580541 ANKRD2Q9GZV1 360 aa17.69■□□□□ 0.42
SKA2-205ENST00000580541 NOP58Q9Y2X3 529 aaKnown RBP17.69■□□□□ 0.42
SKA2-205ENST00000580541 EYA2O00167 538 aa17.68■□□□□ 0.42
SKA2-205ENST00000580541 PPEF1O14829 653 aaPredicted RBP17.68■□□□□ 0.42
SKA2-205ENST00000580541 CELF1Q92879 486 aaKnown RBP17.68■□□□□ 0.42
SKA2-205ENST00000580541 DCTPP1Q9H773 170 aa17.68■□□□□ 0.42
SKA2-205ENST00000580541 MROH5Q6ZUA9 1318 aa17.68■□□□□ 0.42
SKA2-205ENST00000580541 KCNA3P22001 575 aa17.67■□□□□ 0.42
SKA2-205ENST00000580541 PRPF40BQ6NWY9 871 aaKnown RBP17.67■□□□□ 0.42
SKA2-205ENST00000580541 ZNF594Q96JF6 807 aaPredicted RBP17.67■□□□□ 0.42
SKA2-205ENST00000580541 CEP126Q9P2H0 1117 aa17.67■□□□□ 0.42
SKA2-205ENST00000580541 ATP6V0A2Q9Y487 856 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 879.2 ms