RNA–Protein interactions for RNA: ENST00000580295.1

FTSJ3-208, Transcript of FtsJ RNA methyltransferase homolog 3, human

TSL 4

Gene FTSJ3, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FTSJ3-208	ENST00000580295	CSF1R	P07333	972 aa		13.73	□□□□□ -0.21
FTSJ3-208	ENST00000580295	HCLS1	P14317	486 aa	Predicted RBP	13.73	□□□□□ -0.21
FTSJ3-208	ENST00000580295	CTSW	P56202	376 aa		13.73	□□□□□ -0.21
FTSJ3-208	ENST00000580295	FOXO4	P98177	505 aa		13.73	□□□□□ -0.21
FTSJ3-208	ENST00000580295	RABL6	Q3YEC7	729 aa	Predicted RBP	13.73	□□□□□ -0.21
FTSJ3-208	ENST00000580295	RTL5	Q5HYW3	569 aa	Predicted RBP	13.73	□□□□□ -0.21
FTSJ3-208	ENST00000580295	JARID2	Q92833	1246 aa	Predicted RBP	13.73	□□□□□ -0.21
FTSJ3-208	ENST00000580295	KAZALD1	Q96I82	304 aa		13.73	□□□□□ -0.21
FTSJ3-208	ENST00000580295	SUCLG2	Q96I99	432 aa		13.73	□□□□□ -0.21
FTSJ3-208	ENST00000580295	CD2AP	Q9Y5K6	639 aa		13.73	□□□□□ -0.21
FTSJ3-208	ENST00000580295	ANKRD31	Q8N7Z5	1873 aa		13.73	□□□□□ -0.21
FTSJ3-208	ENST00000580295	RTL9	Q8NET4	1388 aa		13.72	□□□□□ -0.21
FTSJ3-208	ENST00000580295	MTX1	Q13505	466 aa		13.72	□□□□□ -0.21
FTSJ3-208	ENST00000580295	CRY2	Q49AN0	593 aa		13.72	□□□□□ -0.21
FTSJ3-208	ENST00000580295	CCDC152	Q4G0S7	254 aa		13.72	□□□□□ -0.21
FTSJ3-208	ENST00000580295	ERICH6B	Q5W0A0	696 aa		13.72	□□□□□ -0.21
FTSJ3-208	ENST00000580295	TTLL11	Q8NHH1	800 aa		13.72	□□□□□ -0.21
FTSJ3-208	ENST00000580295	LRRFIP2	Q9Y608	721 aa	Known RBP	13.72	□□□□□ -0.21
FTSJ3-208	ENST00000580295	TGFB2	P61812	414 aa		13.71	□□□□□ -0.21
FTSJ3-208	ENST00000580295	RPAP2	Q8IXW5	612 aa	Predicted RBP	13.71	□□□□□ -0.21
FTSJ3-208	ENST00000580295	ANKRD44	Q8N8A2	993 aa		13.71	□□□□□ -0.21
FTSJ3-208	ENST00000580295	EXOC6	Q8TAG9	804 aa		13.71	□□□□□ -0.21
FTSJ3-208	ENST00000580295	BICC1	Q9H694	974 aa	Known RBP	13.71	□□□□□ -0.21
FTSJ3-208	ENST00000580295	LRP5	O75197	1615 aa		13.71	□□□□□ -0.22
FTSJ3-208	ENST00000580295		H0YIN7	160 aa		13.7	□□□□□ -0.22
FTSJ3-208	ENST00000580295	HOXA10	P31260	410 aa	Predicted RBP	13.7	□□□□□ -0.22
FTSJ3-208	ENST00000580295	EPHA10	Q5JZY3	1008 aa		13.7	□□□□□ -0.22
FTSJ3-208	ENST00000580295	LMBR1L	Q6UX01	489 aa		13.7	□□□□□ -0.22
FTSJ3-208	ENST00000580295	TNRC6C	Q9HCJ0	1690 aa	Known RBP	13.69	□□□□□ -0.22
FTSJ3-208	ENST00000580295	SRGN	P10124	158 aa		13.69	□□□□□ -0.22
FTSJ3-208	ENST00000580295	NPR1	P16066	1061 aa		13.69	□□□□□ -0.22
FTSJ3-208	ENST00000580295	IRX6	P78412	446 aa	Predicted RBP	13.69	□□□□□ -0.22
FTSJ3-208	ENST00000580295	ATP8B2	P98198	1209 aa		13.69	□□□□□ -0.22
FTSJ3-208	ENST00000580295	CCDC24	Q8N4L8	307 aa		13.69	□□□□□ -0.22
FTSJ3-208	ENST00000580295	RPGR	Q92834	1020 aa	Known RBP	13.69	□□□□□ -0.22
FTSJ3-208	ENST00000580295	MASTL	Q96GX5	879 aa		13.69	□□□□□ -0.22
FTSJ3-208	ENST00000580295	CRAMP1	Q96RY5	1269 aa		13.69	□□□□□ -0.22
FTSJ3-208	ENST00000580295	HMMR	O75330	724 aa		13.68	□□□□□ -0.22
FTSJ3-208	ENST00000580295	ALDH1B1	P30837	517 aa		13.68	□□□□□ -0.22
FTSJ3-208	ENST00000580295	IFIT5	Q13325	482 aa	Known RBP	13.68	□□□□□ -0.22
FTSJ3-208	ENST00000580295	CCDC57	Q2TAC2	916 aa		13.68	□□□□□ -0.22
FTSJ3-208	ENST00000580295	STYK1	Q6J9G0	422 aa		13.68	□□□□□ -0.22
FTSJ3-208	ENST00000580295	CEP85	Q6P2H3	762 aa		13.68	□□□□□ -0.22
FTSJ3-208	ENST00000580295	C3orf67	Q6ZVT6	689 aa		13.68	□□□□□ -0.22
FTSJ3-208	ENST00000580295	DDX46	Q7L014	1031 aa	Known RBP	13.68	□□□□□ -0.22
FTSJ3-208	ENST00000580295	C2CD5	Q86YS7	1000 aa		13.68	□□□□□ -0.22
FTSJ3-208	ENST00000580295	RBM17	Q96I25	401 aa	Known RBP	13.68	□□□□□ -0.22
FTSJ3-208	ENST00000580295	CDC5L	Q99459	802 aa	Known RBP	13.68	□□□□□ -0.22
FTSJ3-208	ENST00000580295	DLEC1	Q9Y238	1755 aa		13.68	□□□□□ -0.22
FTSJ3-208	ENST00000580295	ANKRD18B	A2A2Z9	1011 aa		13.67	□□□□□ -0.22
FTSJ3-208	ENST00000580295	SSH3	Q8TE77	659 aa		13.67	□□□□□ -0.22
FTSJ3-208	ENST00000580295	PPP1R1B	Q9UD71	204 aa	Predicted RBP	13.67	□□□□□ -0.22
FTSJ3-208	ENST00000580295	SRGAP3	O43295	1099 aa		13.66	□□□□□ -0.22
FTSJ3-208	ENST00000580295	ITGA6	P23229	1130 aa		13.66	□□□□□ -0.22
FTSJ3-208	ENST00000580295	TMC4	Q7Z404	712 aa		13.66	□□□□□ -0.22
FTSJ3-208	ENST00000580295	CNKSR1	Q969H4	720 aa		13.66	□□□□□ -0.22
FTSJ3-208	ENST00000580295	GREM2	Q9H772	168 aa		13.66	□□□□□ -0.22
FTSJ3-208	ENST00000580295	C1orf115	Q9H7X2	142 aa		13.66	□□□□□ -0.22
FTSJ3-208	ENST00000580295	FBXO3	Q9UK99	471 aa		13.66	□□□□□ -0.22
FTSJ3-208	ENST00000580295	CHMP3	Q9Y3E7	222 aa		13.66	□□□□□ -0.22
FTSJ3-208	ENST00000580295	COL11A2	P13942	1736 aa	Predicted RBP	13.66	□□□□□ -0.22
FTSJ3-208	ENST00000580295	KIAA1551	Q9HCM1	1747 aa		13.66	□□□□□ -0.22
FTSJ3-208	ENST00000580295	BBOX1	O75936	387 aa		13.65	□□□□□ -0.22
FTSJ3-208	ENST00000580295	GRAP	Q13588	217 aa		13.65	□□□□□ -0.22
FTSJ3-208	ENST00000580295	FAM161A	Q3B820	660 aa		13.65	□□□□□ -0.22
FTSJ3-208	ENST00000580295	GRAPL	Q8TC17	118 aa	Predicted RBP	13.65	□□□□□ -0.22
FTSJ3-208	ENST00000580295	PNMA6E	A0A0J9YXQ4	647 aa		13.64	□□□□□ -0.23
FTSJ3-208	ENST00000580295	DPEP1	P16444	411 aa		13.64	□□□□□ -0.23
FTSJ3-208	ENST00000580295	KCNA3	P22001	575 aa		13.64	□□□□□ -0.23
FTSJ3-208	ENST00000580295	RFX5	P48382	616 aa	Predicted RBP	13.64	□□□□□ -0.23
FTSJ3-208	ENST00000580295	RPS8	P62241	208 aa	Known RBP	13.64	□□□□□ -0.23
FTSJ3-208	ENST00000580295	ANKRD18A	Q8IVF6	992 aa		13.64	□□□□□ -0.23
FTSJ3-208	ENST00000580295	FHDC1	Q9C0D6	1143 aa	Predicted RBP	13.64	□□□□□ -0.23
FTSJ3-208	ENST00000580295	COPRS	Q9NQ92	184 aa		13.64	□□□□□ -0.23
FTSJ3-208	ENST00000580295	PIM2	Q9P1W9	311 aa		13.64	□□□□□ -0.23
FTSJ3-208	ENST00000580295	PCDHB15	Q9Y5E8	787 aa		13.64	□□□□□ -0.23
FTSJ3-208	ENST00000580295		A0A0G2JLW4	131 aa		13.63	□□□□□ -0.23
FTSJ3-208	ENST00000580295	CHRNA5	P30532	468 aa		13.63	□□□□□ -0.23
FTSJ3-208	ENST00000580295	IGHMBP2	P38935	993 aa	Known RBP	13.63	□□□□□ -0.23
FTSJ3-208	ENST00000580295	PTPN12	Q05209	780 aa	Known RBP	13.63	□□□□□ -0.23
FTSJ3-208	ENST00000580295	HDAC1	Q13547	482 aa	Predicted RBP	13.63	□□□□□ -0.23
FTSJ3-208	ENST00000580295	TAF7L	Q5H9L4	462 aa		13.63	□□□□□ -0.23
FTSJ3-208	ENST00000580295	SIRT2	Q8IXJ6	389 aa		13.63	□□□□□ -0.23
FTSJ3-208	ENST00000580295	TTLL6	Q8N841	843 aa		13.63	□□□□□ -0.23
FTSJ3-208	ENST00000580295	ZNF622	Q969S3	477 aa	Known RBP eCLIP	13.63	□□□□□ -0.23
FTSJ3-208	ENST00000580295	CCDC85A	Q96PX6	553 aa	Predicted RBP	13.63	□□□□□ -0.23
FTSJ3-208	ENST00000580295	SYT17	Q9BSW7	474 aa		13.63	□□□□□ -0.23
FTSJ3-208	ENST00000580295	SEC31B	Q9NQW1	1179 aa		13.63	□□□□□ -0.23
FTSJ3-208	ENST00000580295	BSDC1	Q9NW68	430 aa	Predicted RBP	13.63	□□□□□ -0.23
FTSJ3-208	ENST00000580295	BRCA1	P38398	1863 aa	Known RBP	13.63	□□□□□ -0.23
FTSJ3-208	ENST00000580295	CIAO1	O76071	339 aa		13.62	□□□□□ -0.23
FTSJ3-208	ENST00000580295	GRIPAP1	Q4V328	841 aa		13.62	□□□□□ -0.23
FTSJ3-208	ENST00000580295	HSP90AB4P	Q58FF6	505 aa		13.62	□□□□□ -0.23
FTSJ3-208	ENST00000580295	POTEH	Q6S545	545 aa		13.62	□□□□□ -0.23
FTSJ3-208	ENST00000580295	KLHL34	Q8N239	644 aa		13.62	□□□□□ -0.23
FTSJ3-208	ENST00000580295	MPHOSPH8	Q99549	860 aa		13.62	□□□□□ -0.23
FTSJ3-208	ENST00000580295	RWDD1	Q9H446	243 aa	Predicted RBP	13.62	□□□□□ -0.23
FTSJ3-208	ENST00000580295	NOP58	Q9Y2X3	529 aa	Known RBP	13.62	□□□□□ -0.23
FTSJ3-208	ENST00000580295	TAF1	P21675	1872 aa		13.61	□□□□□ -0.23
FTSJ3-208	ENST00000580295	CC2D2B	Q6DHV5	1058 aa		13.61	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms