RNA–Protein interactions for RNA: ENST00000579028.1

BRIP1-204, Transcript of BRCA1 interacting protein C-terminal helicase 1, humanhuman

TSL 5

Gene BRIP1, Length 790 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIP1-204ENST00000579028 CFAP53Q96M91 514 aa11.6□□□□□ -0.55
BRIP1-204ENST00000579028 NUDCQ9Y266 331 aa11.6□□□□□ -0.55
BRIP1-204ENST00000579028 KDM3BQ7LBC6 1761 aa11.59□□□□□ -0.55
BRIP1-204ENST00000579028 TRPM4Q8TD43 1214 aa11.59□□□□□ -0.55
BRIP1-204ENST00000579028 ZIC5Q96T25 663 aa11.59□□□□□ -0.55
BRIP1-204ENST00000579028 TMX4Q9H1E5 349 aaPredicted RBP11.59□□□□□ -0.55
BRIP1-204ENST00000579028 ZNF408Q9H9D4 720 aa11.59□□□□□ -0.55
BRIP1-204ENST00000579028 KIAA2012Q0VF49 1180 aa11.58□□□□□ -0.56
BRIP1-204ENST00000579028 PARP10Q53GL7 1025 aa11.58□□□□□ -0.56
BRIP1-204ENST00000579028 GIGYF2Q6Y7W6 1299 aaKnown RBP11.58□□□□□ -0.56
BRIP1-204ENST00000579028 PPP1R42Q7Z4L9 355 aa11.58□□□□□ -0.56
BRIP1-204ENST00000579028 NLRP3Q96P20 1036 aa11.58□□□□□ -0.56
BRIP1-204ENST00000579028 PCGF6Q9BYE7 350 aa11.58□□□□□ -0.56
BRIP1-204ENST00000579028 ZBTB3Q9H5J0 574 aa11.58□□□□□ -0.56
BRIP1-204ENST00000579028 MIS18AQ9NYP9 233 aa11.58□□□□□ -0.56
BRIP1-204ENST00000579028 ZBTB12Q9Y330 459 aaPredicted RBP11.58□□□□□ -0.56
BRIP1-204ENST00000579028 FAM155AB1AL88 458 aaPredicted RBP11.57□□□□□ -0.56
BRIP1-204ENST00000579028 U2AF1L5P0DN76 240 aaPredicted RBP11.57□□□□□ -0.56
BRIP1-204ENST00000579028 HUNKP57058 714 aa11.57□□□□□ -0.56
BRIP1-204ENST00000579028 U2AF1Q01081 240 aaKnown RBP eCLIP11.57□□□□□ -0.56
BRIP1-204ENST00000579028 TNIP1Q15025 636 aa11.57□□□□□ -0.56
BRIP1-204ENST00000579028 SLC10A5Q5PT55 438 aa11.57□□□□□ -0.56
BRIP1-204ENST00000579028 PNISRQ8TF01 805 aaKnown RBP11.57□□□□□ -0.56
BRIP1-204ENST00000579028 BCL2L13Q9BXK5 485 aa11.57□□□□□ -0.56
BRIP1-204ENST00000579028 SAGE1Q9NXZ1 904 aa11.57□□□□□ -0.56
BRIP1-204ENST00000579028 RRP7AQ9Y3A4 280 aaKnown RBP11.57□□□□□ -0.56
BRIP1-204ENST00000579028 ABCC4O15439 1325 aa11.57□□□□□ -0.56
BRIP1-204ENST00000579028 BBOX1O75936 387 aa11.56□□□□□ -0.56
BRIP1-204ENST00000579028 RAD17O75943 681 aa11.56□□□□□ -0.56
BRIP1-204ENST00000579028 MYL6BP14649 208 aa11.56□□□□□ -0.56
BRIP1-204ENST00000579028 EIF4A1P60842 406 aaKnown RBP11.56□□□□□ -0.56
BRIP1-204ENST00000579028 CNGB1Q14028 1251 aaPredicted RBP11.56□□□□□ -0.56
BRIP1-204ENST00000579028 DPP8Q6V1X1 898 aaPredicted RBP11.56□□□□□ -0.56
BRIP1-204ENST00000579028 SP8Q8IXZ3 490 aa11.56□□□□□ -0.56
BRIP1-204ENST00000579028 MPNDQ8N594 471 aa11.56□□□□□ -0.56
BRIP1-204ENST00000579028 CNOT7Q9UIV1 285 aaKnown RBP11.56□□□□□ -0.56
BRIP1-204ENST00000579028 LAMB2P55268 1798 aa11.56□□□□□ -0.56
BRIP1-204ENST00000579028 ANKRD36CQ5JPF3 1778 aa11.56□□□□□ -0.56
BRIP1-204ENST00000579028 ERBB4Q15303 1308 aa11.56□□□□□ -0.56
BRIP1-204ENST00000579028 DLG5Q8TDM6 1919 aa11.55□□□□□ -0.56
BRIP1-204ENST00000579028 SHTN1A0MZ66 631 aa11.55□□□□□ -0.56
BRIP1-204ENST00000579028 YDJCA8MPS7 323 aa11.55□□□□□ -0.56
BRIP1-204ENST00000579028 H7C1D1 291 aa11.55□□□□□ -0.56
BRIP1-204ENST00000579028 SOX10P56693 466 aa11.55□□□□□ -0.56
BRIP1-204ENST00000579028 RGMBQ6NW40 437 aa11.55□□□□□ -0.56
BRIP1-204ENST00000579028 USP48Q86UV5 1035 aa11.55□□□□□ -0.56
BRIP1-204ENST00000579028 DUOX1Q9NRD9 1551 aa11.54□□□□□ -0.56
BRIP1-204ENST00000579028 PRPF38BQ5VTL8 546 aaKnown RBP11.54□□□□□ -0.56
BRIP1-204ENST00000579028 LRP10Q7Z4F1 713 aa11.54□□□□□ -0.56
BRIP1-204ENST00000579028 MICALL2Q8IY33 904 aa11.54□□□□□ -0.56
BRIP1-204ENST00000579028 DPF2Q92785 391 aa11.54□□□□□ -0.56
BRIP1-204ENST00000579028 CCDC102AQ96A19 550 aa11.54□□□□□ -0.56
BRIP1-204ENST00000579028 UTP14AQ9BVJ6 771 aaKnown RBP11.54□□□□□ -0.56
BRIP1-204ENST00000579028 GBA2Q9HCG7 927 aaPredicted RBP11.54□□□□□ -0.56
BRIP1-204ENST00000579028 LRRC37AA6NMS7 1700 aa11.54□□□□□ -0.56
BRIP1-204ENST00000579028 AKAP11Q9UKA4 1901 aa11.53□□□□□ -0.56
BRIP1-204ENST00000579028 KIF23Q02241 960 aaPredicted RBP11.53□□□□□ -0.56
BRIP1-204ENST00000579028 DLK2Q6UY11 383 aa11.53□□□□□ -0.56
BRIP1-204ENST00000579028 KRT26Q7Z3Y9 468 aa11.53□□□□□ -0.56
BRIP1-204ENST00000579028 C2orf69Q8N8R5 385 aa11.53□□□□□ -0.56
BRIP1-204ENST00000579028 RNF186Q9NXI6 227 aa11.53□□□□□ -0.56
BRIP1-204ENST00000579028 PPP2R1AP30153 589 aa11.52□□□□□ -0.57
BRIP1-204ENST00000579028 GRAPQ13588 217 aa11.52□□□□□ -0.57
BRIP1-204ENST00000579028 SAMD7Q7Z3H4 446 aa11.52□□□□□ -0.57
BRIP1-204ENST00000579028 GRAPLQ8TC17 118 aaPredicted RBP11.52□□□□□ -0.57
BRIP1-204ENST00000579028 POLR2AP24928 1970 aaKnown RBP11.52□□□□□ -0.57
BRIP1-204ENST00000579028 PDE4DIPQ5VU43 2346 aa11.51□□□□□ -0.57
BRIP1-204ENST00000579028 PSMD14O00487 310 aa11.51□□□□□ -0.57
BRIP1-204ENST00000579028 TRPA1O75762 1119 aa11.51□□□□□ -0.57
BRIP1-204ENST00000579028 SLC10A3P09131 477 aa11.51□□□□□ -0.57
BRIP1-204ENST00000579028 ZNF157P51786 506 aaPredicted RBP11.51□□□□□ -0.57
BRIP1-204ENST00000579028 PDIA6Q15084 440 aa11.51□□□□□ -0.57
BRIP1-204ENST00000579028 DDX46Q7L014 1031 aaKnown RBP11.51□□□□□ -0.57
BRIP1-204ENST00000579028 TMC4Q7Z404 712 aa11.51□□□□□ -0.57
BRIP1-204ENST00000579028 CTU1Q7Z7A3 348 aaKnown RBP11.51□□□□□ -0.57
BRIP1-204ENST00000579028 TNRC18O15417 2968 aaPredicted RBP11.5□□□□□ -0.57
BRIP1-204ENST00000579028 ADM5C9JUS6 153 aa11.5□□□□□ -0.57
BRIP1-204ENST00000579028 EGFRP00533 1210 aa11.5□□□□□ -0.57
BRIP1-204ENST00000579028 HCLS1P14317 486 aaPredicted RBP11.5□□□□□ -0.57
BRIP1-204ENST00000579028 RPS12P25398 132 aaKnown RBP11.5□□□□□ -0.57
BRIP1-204ENST00000579028 TBC1D10BQ4KMP7 808 aaPredicted RBP11.5□□□□□ -0.57
BRIP1-204ENST00000579028 NLRP10Q86W26 655 aa11.5□□□□□ -0.57
BRIP1-204ENST00000579028 DCPSQ96C86 337 aaKnown RBP11.5□□□□□ -0.57
BRIP1-204ENST00000579028 CSRNP1Q96S65 589 aa11.5□□□□□ -0.57
BRIP1-204ENST00000579028 THUMPD2Q9BTF0 503 aaKnown RBP11.5□□□□□ -0.57
BRIP1-204ENST00000579028 TAF1P21675 1872 aa11.5□□□□□ -0.57
BRIP1-204ENST00000579028 DDX60Q8IY21 1712 aaKnown RBP11.49□□□□□ -0.57
BRIP1-204ENST00000579028 NEFMP07197 916 aa11.49□□□□□ -0.57
BRIP1-204ENST00000579028 HSP90AB3PQ58FF7 597 aa11.49□□□□□ -0.57
BRIP1-204ENST00000579028 REM2Q8IYK8 340 aaPredicted RBP11.49□□□□□ -0.57
BRIP1-204ENST00000579028 NFE2L2Q16236 605 aa11.48□□□□□ -0.57
BRIP1-204ENST00000579028 WASHC4Q2M389 1173 aa11.48□□□□□ -0.57
BRIP1-204ENST00000579028 PROSER3Q2NL68 480 aa11.48□□□□□ -0.57
BRIP1-204ENST00000579028 PLEKHF1Q96S99 279 aa11.48□□□□□ -0.57
BRIP1-204ENST00000579028 DBNDD1Q9H9R9 158 aa11.48□□□□□ -0.57
BRIP1-204ENST00000579028 HPS5Q9UPZ3 1129 aa11.48□□□□□ -0.57
BRIP1-204ENST00000579028 SH3TC1Q8TE82 1336 aa11.48□□□□□ -0.57
BRIP1-204ENST00000579028 RTL9Q8NET4 1388 aa11.47□□□□□ -0.57
BRIP1-204ENST00000579028 TCIRG1Q13488 830 aa11.47□□□□□ -0.57
BRIP1-204ENST00000579028 PKN2Q16513 984 aaKnown RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms