RNA–Protein interactions for RNA: ENST00000578773.1

GGA3-206, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 432 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-206ENST00000578773 COL4A1P02462 1669 aa15.12■□□□□ 0.01
GGA3-206ENST00000578773 UBN2Q6ZU65 1347 aa15.12■□□□□ 0.01
GGA3-206ENST00000578773 CDHR2Q9BYE9 1310 aa15.12■□□□□ 0.01
GGA3-206ENST00000578773 LRRC37AA6NMS7 1700 aa15.12■□□□□ 0.01
GGA3-206ENST00000578773 GPR25O00155 361 aa15.11■□□□□ 0.01
GGA3-206ENST00000578773 DDX60Q8IY21 1712 aaKnown RBP15.1■□□□□ 0.01
GGA3-206ENST00000578773 TEFQ10587 303 aa15.1■□□□□ 0.01
GGA3-206ENST00000578773 RBM26Q5T8P6 1007 aaKnown RBP15.1■□□□□ 0.01
GGA3-206ENST00000578773 SCAF8Q9UPN6 1271 aaKnown RBP15.1■□□□□ 0.01
GGA3-206ENST00000578773 KIF7Q2M1P5 1343 aa15.1■□□□□ 0.01
GGA3-206ENST00000578773 CDCA5Q96FF9 252 aa15.09■□□□□ 0.01
GGA3-206ENST00000578773 CRAMP1Q96RY5 1269 aa15.09■□□□□ 0.01
GGA3-206ENST00000578773 UNC80Q8N2C7 3258 aa15.09■□□□□ 0.01
GGA3-206ENST00000578773 GPTP24298 496 aa15.08■□□□□ 0
GGA3-206ENST00000578773 MKRN3Q13064 507 aaKnown RBP15.08■□□□□ 0
GGA3-206ENST00000578773 MORC1Q86VD1 984 aa15.08■□□□□ 0
GGA3-206ENST00000578773 OTUD5Q96G74 571 aa15.08■□□□□ 0
GGA3-206ENST00000578773 RTFDC1Q9BY42 306 aaPredicted RBP15.08■□□□□ 0
GGA3-206ENST00000578773 KCNQ5Q9NR82 932 aa15.08■□□□□ 0
GGA3-206ENST00000578773 H7C1D1 291 aa15.07■□□□□ 0
GGA3-206ENST00000578773 PSMD14O00487 310 aa15.07■□□□□ 0
GGA3-206ENST00000578773 KIAA2012Q0VF49 1180 aa15.07■□□□□ 0
GGA3-206ENST00000578773 RBM17Q96I25 401 aaKnown RBP15.07■□□□□ 0
GGA3-206ENST00000578773 GGA3Q9NZ52 723 aa15.07■□□□□ 0
GGA3-206ENST00000578773 ATP6V0A2Q9Y487 856 aa15.07■□□□□ 0
GGA3-206ENST00000578773 PSME4Q14997 1843 aa15.07■□□□□ 0
GGA3-206ENST00000578773 ABCC4O15439 1325 aa15.07■□□□□ 0
GGA3-206ENST00000578773 ZSWIM8A7E2V4 1837 aa15.06■□□□□ 0
GGA3-206ENST00000578773 H0YGN5 161 aa15.06■□□□□ 0
GGA3-206ENST00000578773 TNIP1Q15025 636 aa15.06■□□□□ 0
GGA3-206ENST00000578773 SUSD4Q5VX71 490 aa15.06■□□□□ 0
GGA3-206ENST00000578773 NGEFQ8N5V2 710 aa15.06■□□□□ 0
GGA3-206ENST00000578773 PANK3Q9H999 370 aa15.06■□□□□ 0
GGA3-206ENST00000578773 LAMB1P07942 1786 aa15.06■□□□□ 0
GGA3-206ENST00000578773 BTBD11A6QL63 1104 aa15.05■□□□□ -0
GGA3-206ENST00000578773 CAP1Q01518 475 aa15.05■□□□□ -0
GGA3-206ENST00000578773 DCPSQ96C86 337 aaKnown RBP15.05■□□□□ -0
GGA3-206ENST00000578773 CEMIPQ8WUJ3 1361 aa15.05■□□□□ -0
GGA3-206ENST00000578773 RTL9Q8NET4 1388 aa15.04■□□□□ -0
GGA3-206ENST00000578773 UBE2Q2LH0YL09 131 aa15.04■□□□□ -0
GGA3-206ENST00000578773 FKTNO75072 461 aa15.04■□□□□ -0
GGA3-206ENST00000578773 NTSR2O95665 410 aa15.04■□□□□ -0
GGA3-206ENST00000578773 GRIPAP1Q4V328 841 aa15.04■□□□□ -0
GGA3-206ENST00000578773 DPP8Q6V1X1 898 aaPredicted RBP15.04■□□□□ -0
GGA3-206ENST00000578773 CHRDL2Q6WN34 429 aa15.04■□□□□ -0
GGA3-206ENST00000578773 TTLL7Q6ZT98 887 aa15.04■□□□□ -0
GGA3-206ENST00000578773 GNAT3A8MTJ3 354 aa15.03■□□□□ -0
GGA3-206ENST00000578773 OTOP1Q7RTM1 612 aa15.03■□□□□ -0
GGA3-206ENST00000578773 NYXQ9GZU5 481 aa15.03■□□□□ -0
GGA3-206ENST00000578773 VPS33BQ9H267 617 aa15.03■□□□□ -0
GGA3-206ENST00000578773 DBNDD1Q9H9R9 158 aa15.03■□□□□ -0
GGA3-206ENST00000578773 TRIM17Q9Y577 477 aa15.03■□□□□ -0
GGA3-206ENST00000578773 ZNF646O15015 1829 aaPredicted RBP15.03■□□□□ -0
GGA3-206ENST00000578773 LAMA3Q16787 3333 aa15.02■□□□□ -0
GGA3-206ENST00000578773 COL3A1P02461 1466 aaPredicted RBP15.02■□□□□ -0
GGA3-206ENST00000578773 KIF4BQ2VIQ3 1234 aa15.02■□□□□ -0
GGA3-206ENST00000578773 PRAMEF18Q5VWM3 479 aa15.02■□□□□ -0
GGA3-206ENST00000578773 MPNDQ8N594 471 aa15.02■□□□□ -0
GGA3-206ENST00000578773 RBM27Q9P2N5 1060 aaKnown RBP15.02■□□□□ -0
GGA3-206ENST00000578773 REM2Q8IYK8 340 aaPredicted RBP15.01□□□□□ -0.01
GGA3-206ENST00000578773 SUPT20HQ8NEM7 779 aa15.01□□□□□ -0.01
GGA3-206ENST00000578773 DPF2Q92785 391 aa15.01□□□□□ -0.01
GGA3-206ENST00000578773 IBTKQ9P2D0 1353 aaPredicted RBP15□□□□□ -0.01
GGA3-206ENST00000578773 RGL2O15211 777 aa15□□□□□ -0.01
GGA3-206ENST00000578773 SNRPA1P09661 255 aaKnown RBP15□□□□□ -0.01
GGA3-206ENST00000578773 TM4SF4P48230 202 aa15□□□□□ -0.01
GGA3-206ENST00000578773 NOM1Q5C9Z4 860 aaKnown RBP15□□□□□ -0.01
GGA3-206ENST00000578773 SULF1Q8IWU6 871 aa15□□□□□ -0.01
GGA3-206ENST00000578773 ZBTB3Q9H5J0 574 aa15□□□□□ -0.01
GGA3-206ENST00000578773 MAP3K15Q6ZN16 1313 aa14.99□□□□□ -0.01
GGA3-206ENST00000578773 ANGEL2Q5VTE6 544 aaKnown RBP14.99□□□□□ -0.01
GGA3-206ENST00000578773 ZNF609O15014 1411 aa14.99□□□□□ -0.01
GGA3-206ENST00000578773 DLG5Q8TDM6 1919 aa14.98□□□□□ -0.01
GGA3-206ENST00000578773 RIMBP2O15034 1052 aa14.98□□□□□ -0.01
GGA3-206ENST00000578773 SP8Q8IXZ3 490 aa14.98□□□□□ -0.01
GGA3-206ENST00000578773 SOX1O00570 391 aaPredicted RBP14.97□□□□□ -0.01
GGA3-206ENST00000578773 DOK7Q18PE1 504 aa14.97□□□□□ -0.01
GGA3-206ENST00000578773 INTS3Q68E01 1043 aaKnown RBP14.97□□□□□ -0.01
GGA3-206ENST00000578773 ZNF34Q8IZ26 560 aa14.97□□□□□ -0.01
GGA3-206ENST00000578773 PHACTR3Q96KR7 559 aa14.97□□□□□ -0.01
GGA3-206ENST00000578773 CD99L2Q8TCZ2 262 aa14.96□□□□□ -0.01
GGA3-206ENST00000578773 ZNF428Q96B54 188 aa14.96□□□□□ -0.01
GGA3-206ENST00000578773 ARMC5Q96C12 935 aa14.96□□□□□ -0.01
GGA3-206ENST00000578773 CFHR5Q9BXR6 569 aa14.96□□□□□ -0.01
GGA3-206ENST00000578773 PTPN22Q9Y2R2 807 aa14.96□□□□□ -0.01
GGA3-206ENST00000578773 ECE2O60344 883 aa14.95□□□□□ -0.02
GGA3-206ENST00000578773 DIAPH1O60610 1272 aaKnown RBP14.95□□□□□ -0.02
GGA3-206ENST00000578773 SCARF1Q14162 830 aa14.95□□□□□ -0.02
GGA3-206ENST00000578773 DCTN1Q14203 1278 aa14.95□□□□□ -0.02
GGA3-206ENST00000578773 MCM10Q7L590 875 aa14.95□□□□□ -0.02
GGA3-206ENST00000578773 GAS2L2Q8NHY3 880 aa14.95□□□□□ -0.02
GGA3-206ENST00000578773 FZD1Q9UP38 647 aa14.95□□□□□ -0.02
GGA3-206ENST00000578773 ERVV-1B6SEH8 477 aa14.94□□□□□ -0.02
GGA3-206ENST00000578773 MYCP01106 439 aaPredicted RBP14.94□□□□□ -0.02
GGA3-206ENST00000578773 HCLS1P14317 486 aaPredicted RBP14.94□□□□□ -0.02
GGA3-206ENST00000578773 NLRP3Q96P20 1036 aa14.94□□□□□ -0.02
GGA3-206ENST00000578773 TMX4Q9H1E5 349 aaPredicted RBP14.94□□□□□ -0.02
GGA3-206ENST00000578773 MIS18AQ9NYP9 233 aa14.94□□□□□ -0.02
GGA3-206ENST00000578773 MYL6BP14649 208 aa14.93□□□□□ -0.02
GGA3-206ENST00000578773 LRCH3Q96II8 777 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms