RNA–Protein interactions for RNA: ENST00000578698.1

PTPRM-209, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-209ENST00000578698 JPH1Q9HDC5 661 aaPredicted RBP5.55□□□□□ -1.52
PTPRM-209ENST00000578698 SLAIN2Q9P270 581 aa5.55□□□□□ -1.52
PTPRM-209ENST00000578698 KIAA1024Q9UPX6 916 aa5.55□□□□□ -1.52
PTPRM-209ENST00000578698 AMOTL2Q9Y2J4 779 aa5.55□□□□□ -1.52
PTPRM-209ENST00000578698 PRMT3O60678 531 aa5.54□□□□□ -1.52
PTPRM-209ENST00000578698 NOS2P35228 1153 aa5.54□□□□□ -1.52
PTPRM-209ENST00000578698 SERPINB4P48594 390 aa5.54□□□□□ -1.52
PTPRM-209ENST00000578698 SEC13P55735 322 aa5.54□□□□□ -1.52
PTPRM-209ENST00000578698 TBCELQ5QJ74 424 aa5.54□□□□□ -1.52
PTPRM-209ENST00000578698 CCDC102BQ68D86 513 aa5.54□□□□□ -1.52
PTPRM-209ENST00000578698 C20orf204Q6ZNR8 217 aa5.54□□□□□ -1.52
PTPRM-209ENST00000578698 LENG1Q96BZ8 264 aaPredicted RBP5.54□□□□□ -1.52
PTPRM-209ENST00000578698 CEP63Q96MT8 703 aa5.54□□□□□ -1.52
PTPRM-209ENST00000578698 UBE2OQ9C0C9 1292 aaKnown RBP5.54□□□□□ -1.52
PTPRM-209ENST00000578698 BRD7Q9NPI1 651 aa5.54□□□□□ -1.52
PTPRM-209ENST00000578698 EML1O00423 815 aa5.53□□□□□ -1.52
PTPRM-209ENST00000578698 TEAD4Q15561 434 aa5.53□□□□□ -1.52
PTPRM-209ENST00000578698 MCTP1Q6DN14 999 aa5.53□□□□□ -1.52
PTPRM-209ENST00000578698 SLC9A9Q8IVB4 645 aa5.53□□□□□ -1.52
PTPRM-209ENST00000578698 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.53□□□□□ -1.52
PTPRM-209ENST00000578698 NUDT8Q8WV74 236 aa5.53□□□□□ -1.52
PTPRM-209ENST00000578698 BHMTQ93088 406 aa5.53□□□□□ -1.52
PTPRM-209ENST00000578698 SCHIP1Q9P0W5 487 aaPredicted RBP5.53□□□□□ -1.52
PTPRM-209ENST00000578698 SOWAHDA6NJG2 315 aa5.52□□□□□ -1.53
PTPRM-209ENST00000578698 HSH2DQ96JZ2 352 aa5.52□□□□□ -1.53
PTPRM-209ENST00000578698 BIN2Q9UBW5 565 aaPredicted RBP5.52□□□□□ -1.53
PTPRM-209ENST00000578698 GPC6Q9Y625 555 aaPredicted RBP5.52□□□□□ -1.53
PTPRM-209ENST00000578698 SERTM1A2A2V5 107 aa5.51□□□□□ -1.53
PTPRM-209ENST00000578698 SFI1A8K8P3 1242 aa5.51□□□□□ -1.53
PTPRM-209ENST00000578698 ABL1P00519 1130 aa5.51□□□□□ -1.53
PTPRM-209ENST00000578698 SH3PXD2AQ5TCZ1 1133 aa5.51□□□□□ -1.53
PTPRM-209ENST00000578698 HINFPQ9BQA5 517 aa5.51□□□□□ -1.53
PTPRM-209ENST00000578698 ZNF358Q9NW07 568 aa5.51□□□□□ -1.53
PTPRM-209ENST00000578698 CXXC1Q9P0U4 656 aaPredicted RBP5.51□□□□□ -1.53
PTPRM-209ENST00000578698 KCNH4Q9UQ05 1017 aa5.51□□□□□ -1.53
PTPRM-209ENST00000578698 PCDHGA11Q9Y5H2 935 aa5.51□□□□□ -1.53
PTPRM-209ENST00000578698 KRTAP4-8A0A0G2JLE6 195 aa5.5□□□□□ -1.53
PTPRM-209ENST00000578698 H3BRB1 525 aa5.5□□□□□ -1.53
PTPRM-209ENST00000578698 ZBTB7BO15156 539 aaPredicted RBP5.5□□□□□ -1.53
PTPRM-209ENST00000578698 PAX4O43316 350 aa5.5□□□□□ -1.53
PTPRM-209ENST00000578698 DKK1O94907 266 aa5.5□□□□□ -1.53
PTPRM-209ENST00000578698 SCNN1AP37088 669 aa5.5□□□□□ -1.53
PTPRM-209ENST00000578698 OCLNQ16625 522 aa5.5□□□□□ -1.53
PTPRM-209ENST00000578698 DMRTC2Q8IXT2 367 aaPredicted RBP5.5□□□□□ -1.53
PTPRM-209ENST00000578698 FMR1NBQ8N0W7 255 aaPredicted RBP5.5□□□□□ -1.53
PTPRM-209ENST00000578698 PRIMPOLQ96LW4 560 aa5.5□□□□□ -1.53
PTPRM-209ENST00000578698 TUT1Q9H6E5 874 aaKnown RBP5.5□□□□□ -1.53
PTPRM-209ENST00000578698 PCMTD2Q9NV79 361 aa5.5□□□□□ -1.53
PTPRM-209ENST00000578698 RNF112Q9ULX5 631 aa5.5□□□□□ -1.53
PTPRM-209ENST00000578698 SLC6A14Q9UN76 642 aa5.5□□□□□ -1.53
PTPRM-209ENST00000578698 COBLO75128 1261 aa5.49□□□□□ -1.53
PTPRM-209ENST00000578698 LGR5O75473 907 aa5.49□□□□□ -1.53
PTPRM-209ENST00000578698 PSAPL1Q6NUJ1 521 aa5.49□□□□□ -1.53
PTPRM-209ENST00000578698 TNS4Q8IZW8 715 aa5.49□□□□□ -1.53
PTPRM-209ENST00000578698 TSEN2Q8NCE0 465 aaKnown RBP5.49□□□□□ -1.53
PTPRM-209ENST00000578698 MKNK1Q9BUB5 465 aa5.49□□□□□ -1.53
PTPRM-209ENST00000578698 ANKIB1Q9P2G1 1089 aa5.49□□□□□ -1.53
PTPRM-209ENST00000578698 CHMP3Q9Y3E7 222 aa5.49□□□□□ -1.53
PTPRM-209ENST00000578698 ERCC3P19447 782 aa5.48□□□□□ -1.53
PTPRM-209ENST00000578698 TYRO3Q06418 890 aa5.48□□□□□ -1.53
PTPRM-209ENST00000578698 ZNF211Q13398 564 aaPredicted RBP5.48□□□□□ -1.53
PTPRM-209ENST00000578698 NOM1Q5C9Z4 860 aaKnown RBP5.48□□□□□ -1.53
PTPRM-209ENST00000578698 GLYCTKQ8IVS8 523 aa5.48□□□□□ -1.53
PTPRM-209ENST00000578698 SSBP4Q9BWG4 385 aaPredicted RBP5.48□□□□□ -1.53
PTPRM-209ENST00000578698 IGSF5Q9NSI5 407 aa5.48□□□□□ -1.53
PTPRM-209ENST00000578698 KIAA1522Q9P206 1035 aaPredicted RBP5.48□□□□□ -1.53
PTPRM-209ENST00000578698 EGFL7Q9UHF1 273 aa5.48□□□□□ -1.53
PTPRM-209ENST00000578698 HCN4Q9Y3Q4 1203 aa5.48□□□□□ -1.53
PTPRM-209ENST00000578698 RBM47A0AV96 593 aaKnown RBP5.47□□□□□ -1.53
PTPRM-209ENST00000578698 M0R2N6 131 aa5.47□□□□□ -1.53
PTPRM-209ENST00000578698 RGS9O75916 674 aaPredicted RBP5.47□□□□□ -1.53
PTPRM-209ENST00000578698 IREB2P48200 963 aaKnown RBP5.47□□□□□ -1.53
PTPRM-209ENST00000578698 AFF1P51825 1210 aaKnown RBP5.47□□□□□ -1.53
PTPRM-209ENST00000578698 EPHA4P54764 986 aa5.47□□□□□ -1.53
PTPRM-209ENST00000578698 KCNQ4P56696 695 aa5.47□□□□□ -1.53
PTPRM-209ENST00000578698 DNAJC14Q6Y2X3 702 aaPredicted RBP5.47□□□□□ -1.53
PTPRM-209ENST00000578698 C7orf43Q8WVR3 580 aa5.47□□□□□ -1.53
PTPRM-209ENST00000578698 PNMA5Q96PV4 448 aa5.47□□□□□ -1.53
PTPRM-209ENST00000578698 PHACTR1Q9C0D0 580 aa5.47□□□□□ -1.53
PTPRM-209ENST00000578698 WEE1P30291 646 aa5.46□□□□□ -1.54
PTPRM-209ENST00000578698 SSTR4P31391 388 aa5.46□□□□□ -1.54
PTPRM-209ENST00000578698 TXKP42681 527 aa5.46□□□□□ -1.54
PTPRM-209ENST00000578698 PSMA6P60900 246 aaKnown RBP5.46□□□□□ -1.54
PTPRM-209ENST00000578698 FKBP5Q13451 457 aaPredicted RBP5.46□□□□□ -1.54
PTPRM-209ENST00000578698 ZNF280CQ8ND82 737 aa5.46□□□□□ -1.54
PTPRM-209ENST00000578698 WFDC12Q8WWY7 111 aa5.46□□□□□ -1.54
PTPRM-209ENST00000578698 SUSD3Q96L08 255 aa5.46□□□□□ -1.54
PTPRM-209ENST00000578698 ANO2Q9NQ90 1003 aa5.46□□□□□ -1.54
PTPRM-209ENST00000578698 DNAJB12Q9NXW2 375 aaKnown RBP5.46□□□□□ -1.54
PTPRM-209ENST00000578698 NAGPAQ9UK23 515 aa5.46□□□□□ -1.54
PTPRM-209ENST00000578698 C21orf2O43822 256 aa5.45□□□□□ -1.54
PTPRM-209ENST00000578698 PTCD1O75127 700 aaKnown RBP5.45□□□□□ -1.54
PTPRM-209ENST00000578698 C1orf53Q5VUE5 145 aa5.45□□□□□ -1.54
PTPRM-209ENST00000578698 MSL1Q68DK7 614 aa5.45□□□□□ -1.54
PTPRM-209ENST00000578698 MRRFQ96E11 262 aaKnown RBP5.45□□□□□ -1.54
PTPRM-209ENST00000578698 ICMTO60725 284 aa5.44□□□□□ -1.54
PTPRM-209ENST00000578698 YBX3P16989 372 aaKnown RBP eCLIP5.44□□□□□ -1.54
PTPRM-209ENST00000578698 NOS3P29474 1203 aa5.44□□□□□ -1.54
PTPRM-209ENST00000578698 IRAK1P51617 712 aa5.44□□□□□ -1.54
PTPRM-209ENST00000578698 PRR23CQ6ZRP0 262 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms