RNA–Protein interactions for RNA: ENST00000578469.1

SREBF1-218, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 588 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-218ENST00000578469 SALL3Q9BXA9 1300 aa20.79■□□□□ 0.92
SREBF1-218ENST00000578469 KIF3CO14782 793 aa20.79■□□□□ 0.92
SREBF1-218ENST00000578469 TGFB2P61812 414 aa20.79■□□□□ 0.92
SREBF1-218ENST00000578469 CASC1Q6TDU7 716 aa20.79■□□□□ 0.92
SREBF1-218ENST00000578469 PA2G4Q9UQ80 394 aaKnown RBP20.79■□□□□ 0.92
SREBF1-218ENST00000578469 ZNF831Q5JPB2 1677 aa20.79■□□□□ 0.92
SREBF1-218ENST00000578469 KIF13BQ9NQT8 1826 aa20.78■□□□□ 0.92
SREBF1-218ENST00000578469 PCCAP05165 728 aaPredicted RBP20.78■□□□□ 0.92
SREBF1-218ENST00000578469 APLP1P51693 650 aa20.78■□□□□ 0.92
SREBF1-218ENST00000578469 TRAPPC3LQ5T215 181 aa20.78■□□□□ 0.92
SREBF1-218ENST00000578469 NLGN1Q8N2Q7 840 aa20.78■□□□□ 0.92
SREBF1-218ENST00000578469 COPRSQ9NQ92 184 aa20.78■□□□□ 0.92
SREBF1-218ENST00000578469 BCS1LQ9Y276 419 aa20.78■□□□□ 0.92
SREBF1-218ENST00000578469 ADRA2BP18089 450 aa20.77■□□□□ 0.92
SREBF1-218ENST00000578469 FOXO4P98177 505 aa20.77■□□□□ 0.92
SREBF1-218ENST00000578469 LMBR1LQ6UX01 489 aa20.77■□□□□ 0.92
SREBF1-218ENST00000578469 ZBTB38Q8NAP3 1195 aaPredicted RBP20.77■□□□□ 0.92
SREBF1-218ENST00000578469 C10orf71Q711Q0 1435 aa20.77■□□□□ 0.91
SREBF1-218ENST00000578469 SDSP20132 328 aa20.76■□□□□ 0.91
SREBF1-218ENST00000578469 MFAP1P55081 439 aaKnown RBP20.76■□□□□ 0.91
SREBF1-218ENST00000578469 HLFQ16534 295 aa20.76■□□□□ 0.91
SREBF1-218ENST00000578469 GPATCH3Q96I76 525 aa20.76■□□□□ 0.91
SREBF1-218ENST00000578469 TBC1D2BQ9UPU7 963 aa20.76■□□□□ 0.91
SREBF1-218ENST00000578469 TBC1D9Q6ZT07 1266 aa20.75■□□□□ 0.91
SREBF1-218ENST00000578469 NLRP10Q86W26 655 aa20.75■□□□□ 0.91
SREBF1-218ENST00000578469 NUTM1Q86Y26 1132 aa20.75■□□□□ 0.91
SREBF1-218ENST00000578469 CHMP3Q9Y3E7 222 aa20.75■□□□□ 0.91
SREBF1-218ENST00000578469 TOMM70O94826 608 aa20.74■□□□□ 0.91
SREBF1-218ENST00000578469 IFIT2P09913 472 aaKnown RBP20.74■□□□□ 0.91
SREBF1-218ENST00000578469 RFX5P48382 616 aaPredicted RBP20.74■□□□□ 0.91
SREBF1-218ENST00000578469 RTL5Q5HYW3 569 aaPredicted RBP20.74■□□□□ 0.91
SREBF1-218ENST00000578469 TBC1D32Q96NH3 1257 aa20.74■□□□□ 0.91
SREBF1-218ENST00000578469 PARP3Q9Y6F1 533 aa20.74■□□□□ 0.91
SREBF1-218ENST00000578469 TTC41PQ6P2S7 1318 aa20.74■□□□□ 0.91
SREBF1-218ENST00000578469 CDHR2Q9BYE9 1310 aa20.74■□□□□ 0.91
SREBF1-218ENST00000578469 KIAA1551Q9HCM1 1747 aa20.73■□□□□ 0.91
SREBF1-218ENST00000578469 GPTP24298 496 aa20.73■□□□□ 0.91
SREBF1-218ENST00000578469 RFC4P35249 363 aa20.73■□□□□ 0.91
SREBF1-218ENST00000578469 PTPN12Q05209 780 aaKnown RBP20.73■□□□□ 0.91
SREBF1-218ENST00000578469 PLA2G12BQ9BX93 195 aa20.73■□□□□ 0.91
SREBF1-218ENST00000578469 SIL1Q9H173 461 aa20.73■□□□□ 0.91
SREBF1-218ENST00000578469 CNTNAP4Q9C0A0 1308 aa20.73■□□□□ 0.91
SREBF1-218ENST00000578469 C4AP0C0L4 1744 aa20.73■□□□□ 0.91
SREBF1-218ENST00000578469 A0A0G2JLW4 131 aa20.72■□□□□ 0.91
SREBF1-218ENST00000578469 ERC2O15083 957 aa20.72■□□□□ 0.91
SREBF1-218ENST00000578469 SASH1O94885 1247 aa20.72■□□□□ 0.91
SREBF1-218ENST00000578469 RC3H1Q5TC82 1133 aaKnown RBP20.72■□□□□ 0.91
SREBF1-218ENST00000578469 ARHGAP27Q6ZUM4 889 aa20.72■□□□□ 0.91
SREBF1-218ENST00000578469 ZNF34Q8IZ26 560 aa20.72■□□□□ 0.91
SREBF1-218ENST00000578469 C22orf23Q9BZE7 217 aa20.72■□□□□ 0.91
SREBF1-218ENST00000578469 ZNF652Q9Y2D9 606 aa20.72■□□□□ 0.91
SREBF1-218ENST00000578469 USP42Q9H9J4 1324 aaKnown RBP20.72■□□□□ 0.91
SREBF1-218ENST00000578469 AACSQ86V21 672 aa20.71■□□□□ 0.91
SREBF1-218ENST00000578469 ANKRD36CQ5JPF3 1778 aa20.71■□□□□ 0.91
SREBF1-218ENST00000578469 COL5A3P25940 1745 aaPredicted RBP20.7■□□□□ 0.9
SREBF1-218ENST00000578469 TRIM6-TRIM34B2RNG4 842 aa20.7■□□□□ 0.9
SREBF1-218ENST00000578469 GLRX3O76003 335 aaKnown RBP20.7■□□□□ 0.9
SREBF1-218ENST00000578469 PARP10Q53GL7 1025 aa20.7■□□□□ 0.9
SREBF1-218ENST00000578469 KLHDC4Q8TBB5 520 aa20.7■□□□□ 0.9
SREBF1-218ENST00000578469 ARHGEF1Q92888 912 aaKnown RBP20.7■□□□□ 0.9
SREBF1-218ENST00000578469 FAM89AQ96GI7 184 aa20.7■□□□□ 0.9
SREBF1-218ENST00000578469 ECHDC1Q9NTX5 307 aa20.7■□□□□ 0.9
SREBF1-218ENST00000578469 DAXXQ9UER7 740 aaPredicted RBP20.7■□□□□ 0.9
SREBF1-218ENST00000578469 TRMT112Q9UI30 125 aaKnown RBP20.7■□□□□ 0.9
SREBF1-218ENST00000578469 RGL2O15211 777 aa20.69■□□□□ 0.9
SREBF1-218ENST00000578469 CAMTA2O94983 1202 aa20.69■□□□□ 0.9
SREBF1-218ENST00000578469 CCDC57Q2TAC2 916 aa20.69■□□□□ 0.9
SREBF1-218ENST00000578469 TSHZ3Q63HK5 1081 aa20.69■□□□□ 0.9
SREBF1-218ENST00000578469 RPS6KA4O75676 772 aa20.68■□□□□ 0.9
SREBF1-218ENST00000578469 GYS1P13807 737 aa20.68■□□□□ 0.9
SREBF1-218ENST00000578469 HSP90B1P14625 803 aaKnown RBP20.68■□□□□ 0.9
SREBF1-218ENST00000578469 DPEP1P16444 411 aa20.68■□□□□ 0.9
SREBF1-218ENST00000578469 RILPL2Q969X0 211 aa20.68■□□□□ 0.9
SREBF1-218ENST00000578469 FBXO3Q9UK99 471 aa20.68■□□□□ 0.9
SREBF1-218ENST00000578469 NUP98P52948 1817 aa20.68■□□□□ 0.9
SREBF1-218ENST00000578469 IRS4O14654 1257 aaPredicted RBP20.67■□□□□ 0.9
SREBF1-218ENST00000578469 CSF1RP07333 972 aa20.67■□□□□ 0.9
SREBF1-218ENST00000578469 IL15P40933 162 aaPredicted RBP20.67■□□□□ 0.9
SREBF1-218ENST00000578469 CLEC4GQ6UXB4 293 aa20.67■□□□□ 0.9
SREBF1-218ENST00000578469 ERICH6Q7L0X2 663 aa20.67■□□□□ 0.9
SREBF1-218ENST00000578469 CNTROBQ8N137 903 aa20.67■□□□□ 0.9
SREBF1-218ENST00000578469 PI4K2BQ8TCG2 481 aa20.67■□□□□ 0.9
SREBF1-218ENST00000578469 BRCA1P38398 1863 aaKnown RBP20.67■□□□□ 0.9
SREBF1-218ENST00000578469 CIAO1O76071 339 aa20.66■□□□□ 0.9
SREBF1-218ENST00000578469 TAF7LQ5H9L4 462 aa20.66■□□□□ 0.9
SREBF1-218ENST00000578469 EAF2Q96CJ1 260 aaPredicted RBP20.66■□□□□ 0.9
SREBF1-218ENST00000578469 UTP14AQ9BVJ6 771 aaKnown RBP20.66■□□□□ 0.9
SREBF1-218ENST00000578469 NMRK2Q9NPI5 230 aa20.66■□□□□ 0.9
SREBF1-218ENST00000578469 ARFGEF1Q9Y6D6 1849 aa20.66■□□□□ 0.9
SREBF1-218ENST00000578469 MYH14Q7Z406 1995 aaKnown RBP20.66■□□□□ 0.9
SREBF1-218ENST00000578469 EYA2O00167 538 aa20.65■□□□□ 0.9
SREBF1-218ENST00000578469 PDE8AO60658 829 aa20.65■□□□□ 0.9
SREBF1-218ENST00000578469 IFIT5Q13325 482 aaKnown RBP20.65■□□□□ 0.9
SREBF1-218ENST00000578469 RBM46Q8TBY0 533 aaKnown RBP20.65■□□□□ 0.9
SREBF1-218ENST00000578469 PIM2Q9P1W9 311 aa20.65■□□□□ 0.9
SREBF1-218ENST00000578469 UBN2Q6ZU65 1347 aa20.64■□□□□ 0.89
SREBF1-218ENST00000578469 SH3TC1Q8TE82 1336 aa20.64■□□□□ 0.89
SREBF1-218ENST00000578469 REC8O95072 547 aa20.64■□□□□ 0.89
SREBF1-218ENST00000578469 RBM25P49756 843 aaKnown RBP20.64■□□□□ 0.89
SREBF1-218ENST00000578469 CTSWP56202 376 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms