RNA–Protein interactions for RNA: ENST00000577779.1

PPP4R1-206, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 481 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-206ENST00000577779 MAP3K15Q6ZN16 1313 aa18.89■□□□□ 0.61
PPP4R1-206ENST00000577779 UBN2Q6ZU65 1347 aa18.89■□□□□ 0.61
PPP4R1-206ENST00000577779 CC2D1BQ5T0F9 858 aaKnown RBP18.88■□□□□ 0.61
PPP4R1-206ENST00000577779 SUSD4Q5VX71 490 aa18.88■□□□□ 0.61
PPP4R1-206ENST00000577779 KIF6Q6ZMV9 814 aa18.88■□□□□ 0.61
PPP4R1-206ENST00000577779 MCM10Q7L590 875 aa18.88■□□□□ 0.61
PPP4R1-206ENST00000577779 MICALL2Q8IY33 904 aa18.88■□□□□ 0.61
PPP4R1-206ENST00000577779 RTF1Q92541 710 aaKnown RBP18.88■□□□□ 0.61
PPP4R1-206ENST00000577779 PRKAR2BP31323 418 aa18.87■□□□□ 0.61
PPP4R1-206ENST00000577779 KIAA2012Q0VF49 1180 aa18.87■□□□□ 0.61
PPP4R1-206ENST00000577779 CSRNP1Q96S65 589 aa18.87■□□□□ 0.61
PPP4R1-206ENST00000577779 POLR2AP24928 1970 aaKnown RBP18.86■□□□□ 0.61
PPP4R1-206ENST00000577779 LAMB4A4D0S4 1761 aa18.86■□□□□ 0.61
PPP4R1-206ENST00000577779 ABCC4O15439 1325 aa18.86■□□□□ 0.61
PPP4R1-206ENST00000577779 NTSR2O95665 410 aa18.86■□□□□ 0.61
PPP4R1-206ENST00000577779 TTLL7Q6ZT98 887 aa18.86■□□□□ 0.61
PPP4R1-206ENST00000577779 MPNDQ8N594 471 aa18.86■□□□□ 0.61
PPP4R1-206ENST00000577779 NLRP3Q96P20 1036 aa18.86■□□□□ 0.61
PPP4R1-206ENST00000577779 SLC10A3P09131 477 aa18.85■□□□□ 0.61
PPP4R1-206ENST00000577779 PKN2Q16513 984 aaKnown RBP18.85■□□□□ 0.61
PPP4R1-206ENST00000577779 SAMD7Q7Z3H4 446 aa18.85■□□□□ 0.61
PPP4R1-206ENST00000577779 ZBTB3Q9H5J0 574 aa18.85■□□□□ 0.61
PPP4R1-206ENST00000577779 ADM5C9JUS6 153 aa18.84■□□□□ 0.61
PPP4R1-206ENST00000577779 TBC1D10BQ4KMP7 808 aaPredicted RBP18.84■□□□□ 0.61
PPP4R1-206ENST00000577779 DCPSQ96C86 337 aaKnown RBP18.84■□□□□ 0.61
PPP4R1-206ENST00000577779 ZBTB12Q9Y330 459 aaPredicted RBP18.84■□□□□ 0.61
PPP4R1-206ENST00000577779 RRP7AQ9Y3A4 280 aaKnown RBP18.84■□□□□ 0.61
PPP4R1-206ENST00000577779 YDJCA8MPS7 323 aa18.83■□□□□ 0.6
PPP4R1-206ENST00000577779 HABP4Q5JVS0 413 aaKnown RBP18.83■□□□□ 0.6
PPP4R1-206ENST00000577779 PPP1R42Q7Z4L9 355 aa18.83■□□□□ 0.6
PPP4R1-206ENST00000577779 SP8Q8IXZ3 490 aa18.83■□□□□ 0.6
PPP4R1-206ENST00000577779 REM2Q8IYK8 340 aaPredicted RBP18.83■□□□□ 0.6
PPP4R1-206ENST00000577779 ZNF34Q8IZ26 560 aa18.83■□□□□ 0.6
PPP4R1-206ENST00000577779 DPF2Q92785 391 aa18.83■□□□□ 0.6
PPP4R1-206ENST00000577779 RSPH6AQ9H0K4 717 aa18.83■□□□□ 0.6
PPP4R1-206ENST00000577779 HDAC9Q9UKV0 1011 aa18.83■□□□□ 0.6
PPP4R1-206ENST00000577779 HTTP42858 3142 aa18.83■□□□□ 0.6
PPP4R1-206ENST00000577779 BBOX1O75936 387 aa18.82■□□□□ 0.6
PPP4R1-206ENST00000577779 DCTN1Q14203 1278 aa18.82■□□□□ 0.6
PPP4R1-206ENST00000577779 CENPFP49454 3210 aa18.81■□□□□ 0.6
PPP4R1-206ENST00000577779 EGFRP00533 1210 aa18.81■□□□□ 0.6
PPP4R1-206ENST00000577779 MYL6BP14649 208 aa18.81■□□□□ 0.6
PPP4R1-206ENST00000577779 RBM26Q5T8P6 1007 aaKnown RBP18.81■□□□□ 0.6
PPP4R1-206ENST00000577779 PSMD14O00487 310 aa18.8■□□□□ 0.6
PPP4R1-206ENST00000577779 TAF7Q15545 349 aaPredicted RBP18.8■□□□□ 0.6
PPP4R1-206ENST00000577779 PARP10Q53GL7 1025 aa18.8■□□□□ 0.6
PPP4R1-206ENST00000577779 MIS18AQ9NYP9 233 aa18.8■□□□□ 0.6
PPP4R1-206ENST00000577779 CNGB1Q14028 1251 aaPredicted RBP18.79■□□□□ 0.6
PPP4R1-206ENST00000577779 GIGYF2Q6Y7W6 1299 aaKnown RBP18.79■□□□□ 0.6
PPP4R1-206ENST00000577779 SULF1Q8IWU6 871 aa18.79■□□□□ 0.6
PPP4R1-206ENST00000577779 ZNF296Q8WUU4 475 aaPredicted RBP18.79■□□□□ 0.6
PPP4R1-206ENST00000577779 PER1O15534 1290 aaPredicted RBP18.78■□□□□ 0.6
PPP4R1-206ENST00000577779 SLC10A5Q5PT55 438 aa18.78■□□□□ 0.6
PPP4R1-206ENST00000577779 RASAL3Q86YV0 1011 aa18.78■□□□□ 0.6
PPP4R1-206ENST00000577779 UTP14AQ9BVJ6 771 aaKnown RBP18.78■□□□□ 0.6
PPP4R1-206ENST00000577779 RPS12P25398 132 aaKnown RBP18.77■□□□□ 0.6
PPP4R1-206ENST00000577779 DUOX1Q9NRD9 1551 aa18.76■□□□□ 0.59
PPP4R1-206ENST00000577779 LAMB2P55268 1798 aa18.76■□□□□ 0.59
PPP4R1-206ENST00000577779 HTATSF1O43719 755 aaKnown RBP18.76■□□□□ 0.59
PPP4R1-206ENST00000577779 TBC1D8O95759 1140 aa18.76■□□□□ 0.59
PPP4R1-206ENST00000577779 DDX46Q7L014 1031 aaKnown RBP18.76■□□□□ 0.59
PPP4R1-206ENST00000577779 CDCA5Q96FF9 252 aa18.76■□□□□ 0.59
PPP4R1-206ENST00000577779 DBNDD1Q9H9R9 158 aa18.76■□□□□ 0.59
PPP4R1-206ENST00000577779 GGA3Q9NZ52 723 aa18.76■□□□□ 0.59
PPP4R1-206ENST00000577779 GRAPQ13588 217 aa18.75■□□□□ 0.59
PPP4R1-206ENST00000577779 WASHC4Q2M389 1173 aa18.75■□□□□ 0.59
PPP4R1-206ENST00000577779 KIF4BQ2VIQ3 1234 aa18.75■□□□□ 0.59
PPP4R1-206ENST00000577779 FBXO46Q6PJ61 603 aaPredicted RBP18.75■□□□□ 0.59
PPP4R1-206ENST00000577779 GRAPLQ8TC17 118 aaPredicted RBP18.75■□□□□ 0.59
PPP4R1-206ENST00000577779 ANKRD36CQ5JPF3 1778 aa18.75■□□□□ 0.59
PPP4R1-206ENST00000577779 HCLS1P14317 486 aaPredicted RBP18.74■□□□□ 0.59
PPP4R1-206ENST00000577779 CFAP53Q96M91 514 aa18.74■□□□□ 0.59
PPP4R1-206ENST00000577779 A0A0C4DFX4 3053 aa18.73■□□□□ 0.59
PPP4R1-206ENST00000577779 U2AF1L5P0DN76 240 aaPredicted RBP18.73■□□□□ 0.59
PPP4R1-206ENST00000577779 U2AF1Q01081 240 aaKnown RBP eCLIP18.73■□□□□ 0.59
PPP4R1-206ENST00000577779 TMC4Q7Z404 712 aa18.73■□□□□ 0.59
PPP4R1-206ENST00000577779 NUDCQ9Y266 331 aa18.73■□□□□ 0.59
PPP4R1-206ENST00000577779 TAF1P21675 1872 aa18.73■□□□□ 0.59
PPP4R1-206ENST00000577779 KDM3BQ7LBC6 1761 aa18.73■□□□□ 0.59
PPP4R1-206ENST00000577779 CEP290O15078 2479 aa18.73■□□□□ 0.59
PPP4R1-206ENST00000577779 ASTN2O75129 1339 aaPredicted RBP18.73■□□□□ 0.59
PPP4R1-206ENST00000577779 BRCA2P51587 3418 aa18.72■□□□□ 0.59
PPP4R1-206ENST00000577779 RIMBP2O15034 1052 aa18.72■□□□□ 0.59
PPP4R1-206ENST00000577779 PNISRQ8TF01 805 aaKnown RBP18.72■□□□□ 0.59
PPP4R1-206ENST00000577779 KCNQ5Q9NR82 932 aa18.72■□□□□ 0.59
PPP4R1-206ENST00000577779 SZT2Q5T011 3432 aa18.72■□□□□ 0.59
PPP4R1-206ENST00000577779 LRRC37AA6NMS7 1700 aa18.71■□□□□ 0.59
PPP4R1-206ENST00000577779 GPR25O00155 361 aa18.71■□□□□ 0.59
PPP4R1-206ENST00000577779 ECE2O60344 883 aa18.71■□□□□ 0.59
PPP4R1-206ENST00000577779 EIF4A1P60842 406 aaKnown RBP18.71■□□□□ 0.59
PPP4R1-206ENST00000577779 FKBP1BP68106 108 aa18.71■□□□□ 0.59
PPP4R1-206ENST00000577779 PAPPA2Q9BXP8 1791 aa18.7■□□□□ 0.58
PPP4R1-206ENST00000577779 RTL9Q8NET4 1388 aa18.7■□□□□ 0.58
PPP4R1-206ENST00000577779 C6orf229H3BNL8 230 aa18.7■□□□□ 0.58
PPP4R1-206ENST00000577779 NSFL1CQ9UNZ2 370 aaKnown RBP18.7■□□□□ 0.58
PPP4R1-206ENST00000577779 DDX60Q8IY21 1712 aaKnown RBP18.69■□□□□ 0.58
PPP4R1-206ENST00000577779 FXR1P51114 621 aaKnown RBP eCLIP18.69■□□□□ 0.58
PPP4R1-206ENST00000577779 DOK7Q18PE1 504 aa18.69■□□□□ 0.58
PPP4R1-206ENST00000577779 NOM1Q5C9Z4 860 aaKnown RBP18.69■□□□□ 0.58
PPP4R1-206ENST00000577779 ANGEL2Q5VTE6 544 aaKnown RBP18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms