RNA–Protein interactions for RNA: ENST00000576012.5

SCARF1-209, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 3,292 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-209ENST00000576012 DLG5Q8TDM6 1919 aa17.07■□□□□ 0.32
SCARF1-209ENST00000576012 KCNQ3O43525 872 aa17.07■□□□□ 0.32
SCARF1-209ENST00000576012 SEC31AO94979 1220 aaKnown RBP17.07■□□□□ 0.32
SCARF1-209ENST00000576012 PDCP20941 246 aa17.07■□□□□ 0.32
SCARF1-209ENST00000576012 SNW1Q13573 536 aaKnown RBP17.07■□□□□ 0.32
SCARF1-209ENST00000576012 CWF19L2Q2TBE0 894 aaKnown RBP17.07■□□□□ 0.32
SCARF1-209ENST00000576012 ECHDC1Q9NTX5 307 aa17.07■□□□□ 0.32
SCARF1-209ENST00000576012 METP08581 1390 aa17.06■□□□□ 0.32
SCARF1-209ENST00000576012 ME1P48163 572 aa17.06■□□□□ 0.32
SCARF1-209ENST00000576012 HSP90AA4PQ58FG1 418 aa17.06■□□□□ 0.32
SCARF1-209ENST00000576012 CCDC129Q6ZRS4 1044 aa17.06■□□□□ 0.32
SCARF1-209ENST00000576012 SDF4Q9BRK5 362 aa17.06■□□□□ 0.32
SCARF1-209ENST00000576012 CDK12Q9NYV4 1490 aaPredicted RBP17.06■□□□□ 0.32
SCARF1-209ENST00000576012 TTC21BQ7Z4L5 1316 aa17.06■□□□□ 0.32
SCARF1-209ENST00000576012 NECTIN1Q15223 517 aa17.06■□□□□ 0.32
SCARF1-209ENST00000576012 TAF3Q5VWG9 929 aa17.06■□□□□ 0.32
SCARF1-209ENST00000576012 TMC6Q7Z403 805 aa17.06■□□□□ 0.32
SCARF1-209ENST00000576012 IL17REQ8NFR9 667 aa17.06■□□□□ 0.32
SCARF1-209ENST00000576012 GYS2P54840 703 aa17.06■□□□□ 0.32
SCARF1-209ENST00000576012 HNRNPH2P55795 449 aaKnown RBP17.06■□□□□ 0.32
SCARF1-209ENST00000576012 ZNF589Q86UQ0 364 aaPredicted RBP17.06■□□□□ 0.32
SCARF1-209ENST00000576012 SEC62Q99442 399 aaKnown RBP17.06■□□□□ 0.32
SCARF1-209ENST00000576012 TMEM131LA2VDJ0 1609 aa17.05■□□□□ 0.32
SCARF1-209ENST00000576012 CCAR2Q8N163 923 aaKnown RBP17.05■□□□□ 0.32
SCARF1-209ENST00000576012 CHST3Q7LGC8 479 aa17.05■□□□□ 0.32
SCARF1-209ENST00000576012 CCDC34Q96HJ3 373 aa17.05■□□□□ 0.32
SCARF1-209ENST00000576012 ATP7BP35670 1465 aa17.05■□□□□ 0.32
SCARF1-209ENST00000576012 GNL2Q13823 731 aaKnown RBP17.04■□□□□ 0.32
SCARF1-209ENST00000576012 ZRSR1Q15695 479 aaKnown RBP17.04■□□□□ 0.32
SCARF1-209ENST00000576012 GOLPH3LQ9H4A5 285 aa17.04■□□□□ 0.32
SCARF1-209ENST00000576012 DNAI1Q9UI46 699 aa17.04■□□□□ 0.32
SCARF1-209ENST00000576012 KINO60870 393 aaKnown RBP17.04■□□□□ 0.32
SCARF1-209ENST00000576012 IQCB1Q15051 598 aa17.04■□□□□ 0.32
SCARF1-209ENST00000576012 RAB11FIP4Q86YS3 637 aa17.04■□□□□ 0.32
SCARF1-209ENST00000576012 GNAT3A8MTJ3 354 aa17.04■□□□□ 0.32
SCARF1-209ENST00000576012 CCZ1BP86790 482 aa17.04■□□□□ 0.32
SCARF1-209ENST00000576012 CCZ1P86791 482 aaPredicted RBP17.04■□□□□ 0.32
SCARF1-209ENST00000576012 TOB2Q14106 344 aaPredicted RBP17.04■□□□□ 0.32
SCARF1-209ENST00000576012 SLFNL1Q499Z3 407 aa17.04■□□□□ 0.32
SCARF1-209ENST00000576012 ERO1AQ96HE7 468 aa17.04■□□□□ 0.32
SCARF1-209ENST00000576012 CLCN6P51797 869 aa17.03■□□□□ 0.32
SCARF1-209ENST00000576012 OTUD7BQ6GQQ9 843 aa17.03■□□□□ 0.32
SCARF1-209ENST00000576012 CCDC73Q6ZRK6 1079 aa17.03■□□□□ 0.32
SCARF1-209ENST00000576012 NCOA5Q9HCD5 579 aaKnown RBP17.03■□□□□ 0.32
SCARF1-209ENST00000576012 A0A1B0GVL5 298 aa17.03■□□□□ 0.32
SCARF1-209ENST00000576012 CAPN2P17655 700 aa17.03■□□□□ 0.32
SCARF1-209ENST00000576012 PSMA5P28066 241 aa17.03■□□□□ 0.32
SCARF1-209ENST00000576012 TTC21AQ8NDW8 1320 aa17.03■□□□□ 0.32
SCARF1-209ENST00000576012 FSIP1Q8NA03 581 aa17.02■□□□□ 0.32
SCARF1-209ENST00000576012 IFNKQ9P0W0 207 aa17.02■□□□□ 0.32
SCARF1-209ENST00000576012 URI1O94763 535 aaPredicted RBP17.02■□□□□ 0.32
SCARF1-209ENST00000576012 DNAAF4Q8WXU2 420 aa17.02■□□□□ 0.32
SCARF1-209ENST00000576012 GPATCH3Q96I76 525 aa17.02■□□□□ 0.32
SCARF1-209ENST00000576012 TEFQ10587 303 aa17.02■□□□□ 0.31
SCARF1-209ENST00000576012 Q6ZUG5 572 aa17.02■□□□□ 0.31
SCARF1-209ENST00000576012 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.02■□□□□ 0.31
SCARF1-209ENST00000576012 ZSWIM4Q9H7M6 989 aa17.02■□□□□ 0.31
SCARF1-209ENST00000576012 SPATA31D1Q6ZQQ2 1576 aa17.02■□□□□ 0.31
SCARF1-209ENST00000576012 AATKQ6ZMQ8 1374 aa17.01■□□□□ 0.31
SCARF1-209ENST00000576012 TNRQ92752 1358 aa17.01■□□□□ 0.31
SCARF1-209ENST00000576012 NYAP1Q6ZVC0 841 aa17.01■□□□□ 0.31
SCARF1-209ENST00000576012 EAF2Q96CJ1 260 aaPredicted RBP17.01■□□□□ 0.31
SCARF1-209ENST00000576012 DNAJC2Q99543 621 aaKnown RBP17.01■□□□□ 0.31
SCARF1-209ENST00000576012 RPS6KB1P23443 525 aa17.01■□□□□ 0.31
SCARF1-209ENST00000576012 LMOD1P29536 600 aaPredicted RBP17.01■□□□□ 0.31
SCARF1-209ENST00000576012 STX1AQ16623 288 aa17.01■□□□□ 0.31
SCARF1-209ENST00000576012 NGDNQ8NEJ9 315 aaKnown RBP17.01■□□□□ 0.31
SCARF1-209ENST00000576012 CDC42BPGQ6DT37 1551 aa17.01■□□□□ 0.31
SCARF1-209ENST00000576012 POLA2Q14181 598 aa17.01■□□□□ 0.31
SCARF1-209ENST00000576012 USP28Q96RU2 1077 aa17.01■□□□□ 0.31
SCARF1-209ENST00000576012 XPO4Q9C0E2 1151 aaKnown RBP17■□□□□ 0.31
SCARF1-209ENST00000576012 LGR6Q9HBX8 967 aa17■□□□□ 0.31
SCARF1-209ENST00000576012 ERBB3P21860 1342 aa17■□□□□ 0.31
SCARF1-209ENST00000576012 AOX1Q06278 1338 aa17■□□□□ 0.31
SCARF1-209ENST00000576012 POLR3DP05423 398 aaPredicted RBP17■□□□□ 0.31
SCARF1-209ENST00000576012 TNNT3P45378 269 aaPredicted RBP17■□□□□ 0.31
SCARF1-209ENST00000576012 ST5P78524 1137 aa17■□□□□ 0.31
SCARF1-209ENST00000576012 BMS1Q14692 1282 aaKnown RBP17■□□□□ 0.31
SCARF1-209ENST00000576012 SYCP1Q15431 976 aa17■□□□□ 0.31
SCARF1-209ENST00000576012 SKIDA1Q1XH10 827 aa17■□□□□ 0.31
SCARF1-209ENST00000576012 RNF20Q5VTR2 975 aa17■□□□□ 0.31
SCARF1-209ENST00000576012 E4F1Q66K89 784 aaPredicted RBP17■□□□□ 0.31
SCARF1-209ENST00000576012 MNS1Q8NEH6 495 aa17■□□□□ 0.31
SCARF1-209ENST00000576012 EVI5LQ96CN4 794 aa17■□□□□ 0.31
SCARF1-209ENST00000576012 ELP1O95163 1332 aa17■□□□□ 0.31
SCARF1-209ENST00000576012 A2ML1A8K2U0 1454 aa16.99■□□□□ 0.31
SCARF1-209ENST00000576012 DHX40Q8IX18 779 aaKnown RBP16.99■□□□□ 0.31
SCARF1-209ENST00000576012 STK11IPQ8N1F8 1099 aa16.99■□□□□ 0.31
SCARF1-209ENST00000576012 UBXN4Q92575 508 aa16.99■□□□□ 0.31
SCARF1-209ENST00000576012 CALCOCO1Q9P1Z2 691 aa16.99■□□□□ 0.31
SCARF1-209ENST00000576012 MAP4K1Q92918 833 aa16.99■□□□□ 0.31
SCARF1-209ENST00000576012 NLRP6P59044 892 aa16.99■□□□□ 0.31
SCARF1-209ENST00000576012 G3BP1Q13283 466 aaKnown RBP eCLIP16.99■□□□□ 0.31
SCARF1-209ENST00000576012 SF3A1Q15459 793 aaKnown RBP16.99■□□□□ 0.31
SCARF1-209ENST00000576012 PPP1R13BQ96KQ4 1090 aa16.99■□□□□ 0.31
SCARF1-209ENST00000576012 PNMA6AP0CW24 399 aaPredicted RBP16.98■□□□□ 0.31
SCARF1-209ENST00000576012 DPCR1Q3MIW9 517 aa16.98■□□□□ 0.31
SCARF1-209ENST00000576012 CEP57L1Q8IYX8 460 aa16.98■□□□□ 0.31
SCARF1-209ENST00000576012 MAP3K2Q9Y2U5 619 aa16.98■□□□□ 0.31
SCARF1-209ENST00000576012 PRAMEF22A3QJZ6 481 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms