RNA–Protein interactions for RNA: ENST00000575857.3

SLC12A4-215, Transcript of solute carrier family 12 member 4, human

TSL 3

Gene SLC12A4, Length 588 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SLC12A4-215	ENST00000575857	TTLL6	Q8N841	843 aa		13.72	□□□□□ -0.21
SLC12A4-215	ENST00000575857	FRAT1	Q92837	279 aa	Predicted RBP	13.72	□□□□□ -0.21
SLC12A4-215	ENST00000575857	ZNF622	Q969S3	477 aa	Known RBP eCLIP	13.72	□□□□□ -0.21	4e-6	■□□□□ 10.5
SLC12A4-215	ENST00000575857	PLA2G12B	Q9BX93	195 aa		13.72	□□□□□ -0.21
SLC12A4-215	ENST00000575857	LAMB2	P55268	1798 aa		13.72	□□□□□ -0.21
SLC12A4-215	ENST00000575857	PDE8A	O60658	829 aa		13.71	□□□□□ -0.21
SLC12A4-215	ENST00000575857	CCT4	P50991	539 aa	Known RBP	13.71	□□□□□ -0.21
SLC12A4-215	ENST00000575857	ZKSCAN2	Q63HK3	967 aa		13.71	□□□□□ -0.21
SLC12A4-215	ENST00000575857	INTS3	Q68E01	1043 aa	Known RBP	13.71	□□□□□ -0.21
SLC12A4-215	ENST00000575857	RBM46	Q8TBY0	533 aa	Known RBP	13.71	□□□□□ -0.21
SLC12A4-215	ENST00000575857	C7orf43	Q8WVR3	580 aa		13.71	□□□□□ -0.21
SLC12A4-215	ENST00000575857	CNKSR1	Q969H4	720 aa		13.71	□□□□□ -0.21
SLC12A4-215	ENST00000575857	CRAMP1	Q96RY5	1269 aa		13.71	□□□□□ -0.21
SLC12A4-215	ENST00000575857	PRPF40B	Q6NWY9	871 aa	Known RBP	13.7	□□□□□ -0.22
SLC12A4-215	ENST00000575857	C16orf71	Q8IYS4	520 aa	Predicted RBP	13.7	□□□□□ -0.22
SLC12A4-215	ENST00000575857	USP44	Q9H0E7	712 aa		13.7	□□□□□ -0.22
SLC12A4-215	ENST00000575857	CSF1R	P07333	972 aa		13.69	□□□□□ -0.22
SLC12A4-215	ENST00000575857	NBPF7	P0C2Y1	421 aa	Predicted RBP	13.69	□□□□□ -0.22
SLC12A4-215	ENST00000575857	HSP90B1	P14625	803 aa	Known RBP	13.69	□□□□□ -0.22
SLC12A4-215	ENST00000575857	CTSW	P56202	376 aa		13.69	□□□□□ -0.22
SLC12A4-215	ENST00000575857	EPHA10	Q5JZY3	1008 aa		13.69	□□□□□ -0.22
SLC12A4-215	ENST00000575857	TTLL11	Q8NHH1	800 aa		13.69	□□□□□ -0.22
SLC12A4-215	ENST00000575857	RPGR	Q92834	1020 aa	Known RBP	13.69	□□□□□ -0.22
SLC12A4-215	ENST00000575857	RBM17	Q96I25	401 aa	Known RBP	13.69	□□□□□ -0.22
SLC12A4-215	ENST00000575857	KAZALD1	Q96I82	304 aa		13.69	□□□□□ -0.22
SLC12A4-215	ENST00000575857	COL4A1	P02462	1669 aa		13.69	□□□□□ -0.22
SLC12A4-215	ENST00000575857	SLX4	Q8IY92	1834 aa		13.69	□□□□□ -0.22
SLC12A4-215	ENST00000575857	KDM2B	Q8NHM5	1336 aa		13.68	□□□□□ -0.22
SLC12A4-215	ENST00000575857	SNED1	Q8TER0	1413 aa		13.68	□□□□□ -0.22
SLC12A4-215	ENST00000575857	RLBP1	P12271	317 aa		13.68	□□□□□ -0.22
SLC12A4-215	ENST00000575857	ALDH1B1	P30837	517 aa		13.68	□□□□□ -0.22
SLC12A4-215	ENST00000575857	FOXO4	P98177	505 aa		13.68	□□□□□ -0.22
SLC12A4-215	ENST00000575857	SLC51A	Q86UW1	340 aa		13.68	□□□□□ -0.22
SLC12A4-215	ENST00000575857	CLUAP1	Q96AJ1	413 aa		13.68	□□□□□ -0.22
SLC12A4-215	ENST00000575857	SUCLG2	Q96I99	432 aa		13.68	□□□□□ -0.22
SLC12A4-215	ENST00000575857	C9orf78	Q9NZ63	289 aa	Predicted RBP	13.68	□□□□□ -0.22
SLC12A4-215	ENST00000575857	ARFGEF1	Q9Y6D6	1849 aa		13.68	□□□□□ -0.22
SLC12A4-215	ENST00000575857	RTL9	Q8NET4	1388 aa		13.68	□□□□□ -0.22
SLC12A4-215	ENST00000575857	GRAP	Q13588	217 aa		13.67	□□□□□ -0.22
SLC12A4-215	ENST00000575857	CCDC152	Q4G0S7	254 aa		13.67	□□□□□ -0.22
SLC12A4-215	ENST00000575857	DDX46	Q7L014	1031 aa	Known RBP	13.67	□□□□□ -0.22
SLC12A4-215	ENST00000575857	DZIP1L	Q8IYY4	767 aa	Known RBP	13.67	□□□□□ -0.22
SLC12A4-215	ENST00000575857	TMEM57	Q8N5G2	664 aa		13.67	□□□□□ -0.22
SLC12A4-215	ENST00000575857	GRAPL	Q8TC17	118 aa	Predicted RBP	13.67	□□□□□ -0.22
SLC12A4-215	ENST00000575857	KLRG1	Q96E93	195 aa		13.67	□□□□□ -0.22
SLC12A4-215	ENST00000575857	SEC31B	Q9NQW1	1179 aa		13.67	□□□□□ -0.22
SLC12A4-215	ENST00000575857	NFKBIE	O00221	500 aa		13.66	□□□□□ -0.22
SLC12A4-215	ENST00000575857	C21orf2	O43822	256 aa		13.66	□□□□□ -0.22
SLC12A4-215	ENST00000575857	FSTL1	Q12841	308 aa		13.66	□□□□□ -0.22
SLC12A4-215	ENST00000575857	COL13A1	Q5TAT6	717 aa	Predicted RBP	13.66	□□□□□ -0.22
SLC12A4-215	ENST00000575857	CELF1	Q92879	486 aa	Known RBP	13.66	□□□□□ -0.22
SLC12A4-215	ENST00000575857	CCDC85A	Q96PX6	553 aa	Predicted RBP	13.66	□□□□□ -0.22
SLC12A4-215	ENST00000575857	GREM2	Q9H772	168 aa		13.66	□□□□□ -0.22
SLC12A4-215	ENST00000575857	ZNF219	Q9P2Y4	722 aa	Predicted RBP	13.66	□□□□□ -0.22
SLC12A4-215	ENST00000575857	WDR90	Q96KV7	1748 aa		13.66	□□□□□ -0.22
SLC12A4-215	ENST00000575857	PPEF1	O14829	653 aa	Predicted RBP	13.65	□□□□□ -0.22
SLC12A4-215	ENST00000575857	PLIN1	O60240	522 aa		13.65	□□□□□ -0.22
SLC12A4-215	ENST00000575857	BBOX1	O75936	387 aa		13.65	□□□□□ -0.22
SLC12A4-215	ENST00000575857	RABL6	Q3YEC7	729 aa	Predicted RBP	13.65	□□□□□ -0.22
SLC12A4-215	ENST00000575857	OLFM4	Q6UX06	510 aa		13.65	□□□□□ -0.22
SLC12A4-215	ENST00000575857	ANKRD44	Q8N8A2	993 aa		13.65	□□□□□ -0.22
SLC12A4-215	ENST00000575857	MEIS3	Q99687	375 aa		13.65	□□□□□ -0.22
SLC12A4-215	ENST00000575857	LMNB1	P20700	586 aa		13.64	□□□□□ -0.23
SLC12A4-215	ENST00000575857	FAM161A	Q3B820	660 aa		13.64	□□□□□ -0.23
SLC12A4-215	ENST00000575857	PANK1	Q8TE04	598 aa		13.64	□□□□□ -0.23
SLC12A4-215	ENST00000575857	BICC1	Q9H694	974 aa	Known RBP	13.64	□□□□□ -0.23
SLC12A4-215	ENST00000575857	ATP6V0A2	Q9Y487	856 aa		13.64	□□□□□ -0.23
SLC12A4-215	ENST00000575857	RPS8	P62241	208 aa	Known RBP	13.63	□□□□□ -0.23
SLC12A4-215	ENST00000575857	CC2D2B	Q6DHV5	1058 aa		13.63	□□□□□ -0.23
SLC12A4-215	ENST00000575857	LMBR1L	Q6UX01	489 aa		13.63	□□□□□ -0.23
SLC12A4-215	ENST00000575857	JMY	Q8N9B5	988 aa		13.63	□□□□□ -0.23
SLC12A4-215	ENST00000575857	TAF1	P21675	1872 aa		13.63	□□□□□ -0.23
SLC12A4-215	ENST00000575857	LTBP3	Q9NS15	1303 aa		13.63	□□□□□ -0.23
SLC12A4-215	ENST00000575857	MYH3	P11055	1940 aa		13.62	□□□□□ -0.23
SLC12A4-215	ENST00000575857	PCNT	O95613	3336 aa		13.62	□□□□□ -0.23
SLC12A4-215	ENST00000575857	CACNA1S	Q13698	1873 aa		13.62	□□□□□ -0.23
SLC12A4-215	ENST00000575857	GLTPD2	A6NH11	291 aa		13.62	□□□□□ -0.23
SLC12A4-215	ENST00000575857	POTEC	B2RU33	542 aa		13.62	□□□□□ -0.23
SLC12A4-215	ENST00000575857	UBTFL1	P0CB47	393 aa	Predicted RBP	13.62	□□□□□ -0.23
SLC12A4-215	ENST00000575857	ITGA6	P23229	1130 aa		13.62	□□□□□ -0.23
SLC12A4-215	ENST00000575857	CCDC93	Q567U6	631 aa		13.62	□□□□□ -0.23
SLC12A4-215	ENST00000575857	SOGA3	Q5TF21	947 aa		13.62	□□□□□ -0.23
SLC12A4-215	ENST00000575857	TMC4	Q7Z404	712 aa		13.62	□□□□□ -0.23
SLC12A4-215	ENST00000575857	SP8	Q8IXZ3	490 aa		13.62	□□□□□ -0.23
SLC12A4-215	ENST00000575857	FTSJ3	Q8IY81	847 aa	Known RBP	13.62	□□□□□ -0.23
SLC12A4-215	ENST00000575857	SMC1B	Q8NDV3	1235 aa		13.62	□□□□□ -0.23
SLC12A4-215	ENST00000575857	ZBTB7B	O15156	539 aa	Predicted RBP	13.61	□□□□□ -0.23
SLC12A4-215	ENST00000575857	GNAI3	P08754	354 aa		13.61	□□□□□ -0.23
SLC12A4-215	ENST00000575857	MS4A1	P11836	297 aa		13.61	□□□□□ -0.23
SLC12A4-215	ENST00000575857	PDE3A	Q14432	1141 aa		13.61	□□□□□ -0.23
SLC12A4-215	ENST00000575857	C20orf194	Q5TEA3	1177 aa		13.61	□□□□□ -0.23
SLC12A4-215	ENST00000575857	CDC5L	Q99459	802 aa	Known RBP	13.61	□□□□□ -0.23
SLC12A4-215	ENST00000575857	LRRFIP2	Q9Y608	721 aa	Known RBP	13.61	□□□□□ -0.23
SLC12A4-215	ENST00000575857	LRRC37A	A6NMS7	1700 aa		13.61	□□□□□ -0.23
SLC12A4-215	ENST00000575857	FER1L6	Q2WGJ9	1857 aa		13.61	□□□□□ -0.23
SLC12A4-215	ENST00000575857	CAPN15	O75808	1086 aa		13.6	□□□□□ -0.23
SLC12A4-215	ENST00000575857	SBF1	O95248	1867 aa		13.6	□□□□□ -0.23
SLC12A4-215	ENST00000575857	VEGFA	P15692	232 aa	Predicted RBP	13.6	□□□□□ -0.23
SLC12A4-215	ENST00000575857	RRP1	P56182	461 aa	Known RBP	13.6	□□□□□ -0.23
SLC12A4-215	ENST00000575857	ANKRD18A	Q8IVF6	992 aa		13.6	□□□□□ -0.23

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