RNA–Protein interactions for RNA: ENST00000575461.1

CALCOCO2-226, Transcript of calcium binding and coiled-coil domain 2, humanhuman

Gene CALCOCO2, Length 465 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-226ENST00000575461 ATP4AP20648 1035 aa12.15□□□□□ -0.46
CALCOCO2-226ENST00000575461 NXPE4Q6UWF7 544 aa12.15□□□□□ -0.46
CALCOCO2-226ENST00000575461 SUV39H2Q9H5I1 410 aa12.15□□□□□ -0.46
CALCOCO2-226ENST00000575461 TMEM63CQ9P1W3 806 aa12.15□□□□□ -0.46
CALCOCO2-226ENST00000575461 KLRG1Q96E93 195 aa12.14□□□□□ -0.47
CALCOCO2-226ENST00000575461 PPP4R2Q9NY27 417 aa12.14□□□□□ -0.47
CALCOCO2-226ENST00000575461 V9GY48 417 aaPredicted RBP12.14□□□□□ -0.47
CALCOCO2-226ENST00000575461 STK10O94804 968 aaKnown RBP12.13□□□□□ -0.47
CALCOCO2-226ENST00000575461 FGRP09769 529 aa12.13□□□□□ -0.47
CALCOCO2-226ENST00000575461 GSTT1P30711 240 aa12.13□□□□□ -0.47
CALCOCO2-226ENST00000575461 POU4F2Q12837 409 aa12.13□□□□□ -0.47
CALCOCO2-226ENST00000575461 ARSJQ5FYB0 599 aaPredicted RBP12.13□□□□□ -0.47
CALCOCO2-226ENST00000575461 LRRC69Q6ZNQ3 347 aa12.13□□□□□ -0.47
CALCOCO2-226ENST00000575461 MCF2L2Q86YR7 1114 aa12.13□□□□□ -0.47
CALCOCO2-226ENST00000575461 GPRASP2Q96D09 838 aa12.13□□□□□ -0.47
CALCOCO2-226ENST00000575461 NOC4LQ9BVI4 516 aaKnown RBP12.13□□□□□ -0.47
CALCOCO2-226ENST00000575461 A0A1B0GTH6 734 aa12.12□□□□□ -0.47
CALCOCO2-226ENST00000575461 EGFRP00533 1210 aa12.12□□□□□ -0.47
CALCOCO2-226ENST00000575461 PAK2Q13177 524 aa12.12□□□□□ -0.47
CALCOCO2-226ENST00000575461 POTEGQ6S5H5 508 aa12.12□□□□□ -0.47
CALCOCO2-226ENST00000575461 LINC00528Q8N1L1 170 aa12.12□□□□□ -0.47
CALCOCO2-226ENST00000575461 PMFBP1Q8TBY8 1022 aa12.12□□□□□ -0.47
CALCOCO2-226ENST00000575461 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.12□□□□□ -0.47
CALCOCO2-226ENST00000575461 CHRDQ9H2X0 955 aa12.12□□□□□ -0.47
CALCOCO2-226ENST00000575461 ABI2Q9NYB9 513 aaPredicted RBP12.12□□□□□ -0.47
CALCOCO2-226ENST00000575461 PPM1GO15355 546 aaPredicted RBP12.11□□□□□ -0.47
CALCOCO2-226ENST00000575461 XYLBO75191 536 aa12.11□□□□□ -0.47
CALCOCO2-226ENST00000575461 POLR3DP05423 398 aaPredicted RBP12.11□□□□□ -0.47
CALCOCO2-226ENST00000575461 SMPD1P17405 629 aa12.11□□□□□ -0.47
CALCOCO2-226ENST00000575461 ATF4P18848 351 aaPredicted RBP12.11□□□□□ -0.47
CALCOCO2-226ENST00000575461 CTSOP43234 321 aaPredicted RBP12.11□□□□□ -0.47
CALCOCO2-226ENST00000575461 TOR4AQ9NXH8 423 aa12.11□□□□□ -0.47
CALCOCO2-226ENST00000575461 TRAK1Q9UPV9 953 aa12.11□□□□□ -0.47
CALCOCO2-226ENST00000575461 TLDC2A0PJX2 215 aa12.1□□□□□ -0.47
CALCOCO2-226ENST00000575461 EREGO14944 169 aa12.1□□□□□ -0.47
CALCOCO2-226ENST00000575461 TYRO3Q06418 890 aa12.1□□□□□ -0.47
CALCOCO2-226ENST00000575461 PWP1Q13610 501 aa12.1□□□□□ -0.47
CALCOCO2-226ENST00000575461 LYSMD3Q7Z3D4 306 aa12.1□□□□□ -0.47
CALCOCO2-226ENST00000575461 NLRP13Q86W25 1043 aa12.1□□□□□ -0.47
CALCOCO2-226ENST00000575461 C1orf127Q8N9H9 656 aa12.1□□□□□ -0.47
CALCOCO2-226ENST00000575461 RASGRP4Q8TDF6 673 aa12.1□□□□□ -0.47
CALCOCO2-226ENST00000575461 GJA3Q9Y6H8 435 aa12.1□□□□□ -0.47
CALCOCO2-226ENST00000575461 GDF9O60383 454 aa12.09□□□□□ -0.47
CALCOCO2-226ENST00000575461 MSX1P28360 303 aa12.09□□□□□ -0.47
CALCOCO2-226ENST00000575461 GRM2Q14416 872 aa12.09□□□□□ -0.47
CALCOCO2-226ENST00000575461 TTC39BQ5VTQ0 682 aaPredicted RBP12.09□□□□□ -0.47
CALCOCO2-226ENST00000575461 KIAA0319Q5VV43 1072 aa12.09□□□□□ -0.47
CALCOCO2-226ENST00000575461 PRICKLE2Q7Z3G6 844 aa12.09□□□□□ -0.47
CALCOCO2-226ENST00000575461 CEP63Q96MT8 703 aa12.09□□□□□ -0.47
CALCOCO2-226ENST00000575461 RSRP1Q9BUV0 290 aa12.09□□□□□ -0.47
CALCOCO2-226ENST00000575461 A0A1W2PNR3 127 aa12.08□□□□□ -0.48
CALCOCO2-226ENST00000575461 RNF217Q8TC41 542 aa12.08□□□□□ -0.48
CALCOCO2-226ENST00000575461 ZSWIM4Q9H7M6 989 aa12.08□□□□□ -0.48
CALCOCO2-226ENST00000575461 TIMMDC1Q9NPL8 285 aa12.08□□□□□ -0.48
CALCOCO2-226ENST00000575461 CNTN3Q9P232 1028 aa12.08□□□□□ -0.48
CALCOCO2-226ENST00000575461 TTF2Q9UNY4 1162 aaKnown RBP12.08□□□□□ -0.48
CALCOCO2-226ENST00000575461 ANKRD62A6NC57 917 aa12.07□□□□□ -0.48
CALCOCO2-226ENST00000575461 CES1P23141 567 aa12.07□□□□□ -0.48
CALCOCO2-226ENST00000575461 VEGFBP49765 207 aa12.07□□□□□ -0.48
CALCOCO2-226ENST00000575461 SEC16BQ96JE7 1060 aa12.07□□□□□ -0.48
CALCOCO2-226ENST00000575461 OSBPL2Q9H1P3 480 aa12.07□□□□□ -0.48
CALCOCO2-226ENST00000575461 COPRSQ9NQ92 184 aa12.07□□□□□ -0.48
CALCOCO2-226ENST00000575461 GRNP28799 593 aaKnown RBP12.06□□□□□ -0.48
CALCOCO2-226ENST00000575461 KBTBD4Q9NVX7 518 aa12.06□□□□□ -0.48
CALCOCO2-226ENST00000575461 EDN3P14138 238 aa12.05□□□□□ -0.48
CALCOCO2-226ENST00000575461 RELL1Q8IUW5 271 aa12.05□□□□□ -0.48
CALCOCO2-226ENST00000575461 ANKRD24Q8TF21 1146 aa12.05□□□□□ -0.48
CALCOCO2-226ENST00000575461 SPON2Q9BUD6 331 aa12.05□□□□□ -0.48
CALCOCO2-226ENST00000575461 EHD4Q9H223 541 aa12.05□□□□□ -0.48
CALCOCO2-226ENST00000575461 CAPN5O15484 640 aaPredicted RBP12.04□□□□□ -0.48
CALCOCO2-226ENST00000575461 RLBP1P12271 317 aa12.04□□□□□ -0.48
CALCOCO2-226ENST00000575461 BMP2P12643 396 aa12.04□□□□□ -0.48
CALCOCO2-226ENST00000575461 XRCC5P13010 732 aaKnown RBP12.04□□□□□ -0.48
CALCOCO2-226ENST00000575461 KIAA0825Q8IV33 1275 aa12.04□□□□□ -0.48
CALCOCO2-226ENST00000575461 HPS1Q92902 700 aa12.04□□□□□ -0.48
CALCOCO2-226ENST00000575461 CRISPLD1Q9H336 500 aa12.04□□□□□ -0.48
CALCOCO2-226ENST00000575461 PPM1HQ9ULR3 514 aa12.04□□□□□ -0.48
CALCOCO2-226ENST00000575461 SAMD5Q5TGI4 173 aa12.03□□□□□ -0.48
CALCOCO2-226ENST00000575461 NBPF6Q5VWK0 638 aa12.03□□□□□ -0.48
CALCOCO2-226ENST00000575461 CKAP2LQ8IYA6 745 aa12.03□□□□□ -0.48
CALCOCO2-226ENST00000575461 ANKRD13AQ8IZ07 590 aa12.03□□□□□ -0.48
CALCOCO2-226ENST00000575461 C3orf58Q8NDZ4 430 aa12.03□□□□□ -0.48
CALCOCO2-226ENST00000575461 NBPF4Q96M43 638 aa12.03□□□□□ -0.48
CALCOCO2-226ENST00000575461 PIF1Q9H611 641 aa12.03□□□□□ -0.48
CALCOCO2-226ENST00000575461 TNFRSF10AO00220 468 aa12.02□□□□□ -0.49
CALCOCO2-226ENST00000575461 NFE2L2Q16236 605 aa12.02□□□□□ -0.49
CALCOCO2-226ENST00000575461 PRPF40BQ6NWY9 871 aaKnown RBP12.02□□□□□ -0.49
CALCOCO2-226ENST00000575461 NLRP8Q86W28 1048 aa12.02□□□□□ -0.49
CALCOCO2-226ENST00000575461 GLIS3Q8NEA6 775 aa12.02□□□□□ -0.49
CALCOCO2-226ENST00000575461 BRD7Q9NPI1 651 aa12.02□□□□□ -0.49
CALCOCO2-226ENST00000575461 A0A1W2PP55 124 aa12.01□□□□□ -0.49
CALCOCO2-226ENST00000575461 CCDC85BQ15834 202 aaPredicted RBP12.01□□□□□ -0.49
CALCOCO2-226ENST00000575461 SDE2Q6IQ49 451 aa12.01□□□□□ -0.49
CALCOCO2-226ENST00000575461 TBX22Q9Y458 520 aa12.01□□□□□ -0.49
CALCOCO2-226ENST00000575461 SSBP05455 408 aaKnown RBP eCLIP12□□□□□ -0.49
CALCOCO2-226ENST00000575461 KCNQ4P56696 695 aa12□□□□□ -0.49
CALCOCO2-226ENST00000575461 PRR20EP86478 221 aa12□□□□□ -0.49
CALCOCO2-226ENST00000575461 PRR20CP86479 221 aa12□□□□□ -0.49
CALCOCO2-226ENST00000575461 PRR20DP86480 221 aa12□□□□□ -0.49
CALCOCO2-226ENST00000575461 PRR20BP86481 221 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms