RNA–Protein interactions for RNA: ENST00000575156.5

ERCC4-207, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC4, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-207ENST00000575156 DEFB132Q7Z7B7 95 aa17.04■□□□□ 0.32
ERCC4-207ENST00000575156 PUS3Q9BZE2 481 aaKnown RBP17.04■□□□□ 0.32
ERCC4-207ENST00000575156 NFIXQ14938 502 aa17.03■□□□□ 0.32
ERCC4-207ENST00000575156 CCDC57Q2TAC2 916 aa17.03■□□□□ 0.32
ERCC4-207ENST00000575156 LRRC24Q50LG9 513 aa17.03■□□□□ 0.32
ERCC4-207ENST00000575156 C3orf67Q6ZVT6 689 aa17.03■□□□□ 0.32
ERCC4-207ENST00000575156 ITGA6P23229 1130 aa17.03■□□□□ 0.32
ERCC4-207ENST00000575156 PDE1AP54750 535 aa17.03■□□□□ 0.32
ERCC4-207ENST00000575156 ATG9AQ7Z3C6 839 aa17.03■□□□□ 0.32
ERCC4-207ENST00000575156 ERC1Q8IUD2 1116 aa17.03■□□□□ 0.32
ERCC4-207ENST00000575156 ANO8Q9HCE9 1232 aaPredicted RBP17.03■□□□□ 0.32
ERCC4-207ENST00000575156 ABCC12Q96J65 1359 aa17.02■□□□□ 0.32
ERCC4-207ENST00000575156 TFCP2Q12800 502 aa17.02■□□□□ 0.32
ERCC4-207ENST00000575156 IFIT5Q13325 482 aaKnown RBP17.02■□□□□ 0.32
ERCC4-207ENST00000575156 COL23A1Q86Y22 540 aaPredicted RBP17.02■□□□□ 0.32
ERCC4-207ENST00000575156 MX1P20591 662 aa17.01■□□□□ 0.31
ERCC4-207ENST00000575156 NBPF5PQ86XG9 351 aaPredicted RBP17.01■□□□□ 0.31
ERCC4-207ENST00000575156 DDX60Q8IY21 1712 aaKnown RBP17.01■□□□□ 0.31
ERCC4-207ENST00000575156 TTC22Q5TAA0 569 aa17.01■□□□□ 0.31
ERCC4-207ENST00000575156 CLASRPQ8N2M8 674 aaKnown RBP17.01■□□□□ 0.31
ERCC4-207ENST00000575156 EAF2Q96CJ1 260 aaPredicted RBP17.01■□□□□ 0.31
ERCC4-207ENST00000575156 EYA2O00167 538 aa17■□□□□ 0.31
ERCC4-207ENST00000575156 BMP2KLQ5H9B9 411 aa17■□□□□ 0.31
ERCC4-207ENST00000575156 AACSQ86V21 672 aa17■□□□□ 0.31
ERCC4-207ENST00000575156 SEC31BQ9NQW1 1179 aa17■□□□□ 0.31
ERCC4-207ENST00000575156 TLR7Q9NYK1 1049 aaKnown RBP17■□□□□ 0.31
ERCC4-207ENST00000575156 COL24A1Q17RW2 1714 aa17■□□□□ 0.31
ERCC4-207ENST00000575156 RGPD3A6NKT7 1758 aaPredicted RBP17■□□□□ 0.31
ERCC4-207ENST00000575156 RGPD4Q7Z3J3 1758 aa17■□□□□ 0.31
ERCC4-207ENST00000575156 MSH5O43196 834 aa17■□□□□ 0.31
ERCC4-207ENST00000575156 GTF2E1P29083 439 aaPredicted RBP17■□□□□ 0.31
ERCC4-207ENST00000575156 CCDC8Q9H0W5 538 aaPredicted RBP17■□□□□ 0.31
ERCC4-207ENST00000575156 OSBPL3Q9H4L5 887 aa17■□□□□ 0.31
ERCC4-207ENST00000575156 TUBGCP6Q96RT7 1819 aa16.99■□□□□ 0.31
ERCC4-207ENST00000575156 TAF7LQ5H9L4 462 aa16.99■□□□□ 0.31
ERCC4-207ENST00000575156 STAP2Q9UGK3 403 aa16.99■□□□□ 0.31
ERCC4-207ENST00000575156 PNPLA7Q6ZV29 1317 aa16.99■□□□□ 0.31
ERCC4-207ENST00000575156 ANKRD18BA2A2Z9 1011 aa16.98■□□□□ 0.31
ERCC4-207ENST00000575156 NYXQ9GZU5 481 aa16.98■□□□□ 0.31
ERCC4-207ENST00000575156 MYH3P11055 1940 aa16.98■□□□□ 0.31
ERCC4-207ENST00000575156 CARMIL3Q8ND23 1372 aa16.98■□□□□ 0.31
ERCC4-207ENST00000575156 SEC24BO95487 1268 aa16.98■□□□□ 0.31
ERCC4-207ENST00000575156 HMGB2P26583 209 aaKnown RBP16.98■□□□□ 0.31
ERCC4-207ENST00000575156 TM4SF1P30408 202 aa16.98■□□□□ 0.31
ERCC4-207ENST00000575156 SF3B2Q13435 895 aaKnown RBP16.98■□□□□ 0.31
ERCC4-207ENST00000575156 TPTE2Q6XPS3 522 aa16.98■□□□□ 0.31
ERCC4-207ENST00000575156 RBM19Q9Y4C8 960 aaKnown RBP16.98■□□□□ 0.31
ERCC4-207ENST00000575156 CIAO1O76071 339 aa16.97■□□□□ 0.31
ERCC4-207ENST00000575156 IL15P40933 162 aaPredicted RBP16.97■□□□□ 0.31
ERCC4-207ENST00000575156 DDR1Q08345 913 aa16.97■□□□□ 0.31
ERCC4-207ENST00000575156 SLC10A5Q5PT55 438 aa16.97■□□□□ 0.31
ERCC4-207ENST00000575156 COL4A1P02462 1669 aa16.97■□□□□ 0.31
ERCC4-207ENST00000575156 IFIT2P09913 472 aaKnown RBP16.97■□□□□ 0.31
ERCC4-207ENST00000575156 BAG6P46379 1132 aa16.97■□□□□ 0.31
ERCC4-207ENST00000575156 CCDC152Q4G0S7 254 aa16.97■□□□□ 0.31
ERCC4-207ENST00000575156 TNNI3KQ59H18 835 aa16.97■□□□□ 0.31
ERCC4-207ENST00000575156 FPGT-TNNI3KV9GXZ4 949 aa16.97■□□□□ 0.31
ERCC4-207ENST00000575156 SDSP20132 328 aa16.96■□□□□ 0.31
ERCC4-207ENST00000575156 LDHAL6AQ6ZMR3 332 aa16.96■□□□□ 0.31
ERCC4-207ENST00000575156 PI4K2BQ8TCG2 481 aa16.96■□□□□ 0.31
ERCC4-207ENST00000575156 RIPOR2Q9Y4F9 1068 aa16.96■□□□□ 0.31
ERCC4-207ENST00000575156 LAMB2P55268 1798 aa16.96■□□□□ 0.31
ERCC4-207ENST00000575156 SLC15A2Q16348 729 aa16.95■□□□□ 0.3
ERCC4-207ENST00000575156 NPHP1O15259 732 aa16.95■□□□□ 0.3
ERCC4-207ENST00000575156 SERPINB2P05120 415 aa16.95■□□□□ 0.3
ERCC4-207ENST00000575156 HSP90B1P14625 803 aaKnown RBP16.95■□□□□ 0.3
ERCC4-207ENST00000575156 SF3B3Q15393 1217 aaKnown RBP16.95■□□□□ 0.3
ERCC4-207ENST00000575156 PRR5LQ6MZQ0 368 aa16.95■□□□□ 0.3
ERCC4-207ENST00000575156 CNBD1Q8NA66 436 aa16.95■□□□□ 0.3
ERCC4-207ENST00000575156 DBNLQ9UJU6 430 aaKnown RBP16.95■□□□□ 0.3
ERCC4-207ENST00000575156 RIC1Q4ADV7 1423 aa16.94■□□□□ 0.3
ERCC4-207ENST00000575156 POLRMTO00411 1230 aaKnown RBP16.94■□□□□ 0.3
ERCC4-207ENST00000575156 MAP4K4O95819 1239 aaPredicted RBP16.94■□□□□ 0.3
ERCC4-207ENST00000575156 TIMM10P62072 90 aa16.94■□□□□ 0.3
ERCC4-207ENST00000575156 MSL1Q68DK7 614 aa16.94■□□□□ 0.3
ERCC4-207ENST00000575156 CNNM1Q9NRU3 951 aa16.94■□□□□ 0.3
ERCC4-207ENST00000575156 FLAD1Q8NFF5 587 aa16.93■□□□□ 0.3
ERCC4-207ENST00000575156 DBNDD2Q9BQY9 259 aa16.93■□□□□ 0.3
ERCC4-207ENST00000575156 RTL9Q8NET4 1388 aa16.93■□□□□ 0.3
ERCC4-207ENST00000575156 NLRP3Q96P20 1036 aa16.93■□□□□ 0.3
ERCC4-207ENST00000575156 ECHDC1Q9NTX5 307 aa16.93■□□□□ 0.3
ERCC4-207ENST00000575156 STK32BQ9NY57 414 aa16.93■□□□□ 0.3
ERCC4-207ENST00000575156 CEP126Q9P2H0 1117 aa16.93■□□□□ 0.3
ERCC4-207ENST00000575156 FBXO3Q9UK99 471 aa16.93■□□□□ 0.3
ERCC4-207ENST00000575156 AOX1Q06278 1338 aa16.93■□□□□ 0.3
ERCC4-207ENST00000575156 METTL24Q5JXM2 366 aa16.92■□□□□ 0.3
ERCC4-207ENST00000575156 PDGFDQ9GZP0 370 aaPredicted RBP16.92■□□□□ 0.3
ERCC4-207ENST00000575156 TNRC6CQ9HCJ0 1690 aaKnown RBP16.92■□□□□ 0.3
ERCC4-207ENST00000575156 LRP5O75197 1615 aa16.92■□□□□ 0.3
ERCC4-207ENST00000575156 TBC1D9Q6ZT07 1266 aa16.92■□□□□ 0.3
ERCC4-207ENST00000575156 HELBQ8NG08 1087 aaPredicted RBP16.92■□□□□ 0.3
ERCC4-207ENST00000575156 NEUROD6Q96NK8 337 aa16.92■□□□□ 0.3
ERCC4-207ENST00000575156 TTC41PQ6P2S7 1318 aa16.91■□□□□ 0.3
ERCC4-207ENST00000575156 NLGN1Q8N2Q7 840 aa16.91■□□□□ 0.3
ERCC4-207ENST00000575156 VGLL2Q8N8G2 317 aa16.91■□□□□ 0.3
ERCC4-207ENST00000575156 CELF1Q92879 486 aaKnown RBP16.91■□□□□ 0.3
ERCC4-207ENST00000575156 GPR108Q9NPR9 543 aa16.91■□□□□ 0.3
ERCC4-207ENST00000575156 ZNF609O15014 1411 aa16.91■□□□□ 0.3
ERCC4-207ENST00000575156 A0A1B0GUL7 405 aa16.9■□□□□ 0.3
ERCC4-207ENST00000575156 TRIM6-TRIM34B2RNG4 842 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms