RNA–Protein interactions for RNA: ENST00000574408.5

USP43-205, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 1 (best)

Gene USP43, Length 3,425 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-205ENST00000574408 ZBTB38Q8NAP3 1195 aaPredicted RBP12.6□□□□□ -0.39
USP43-205ENST00000574408 TBC1D2BQ9UPU7 963 aa12.6□□□□□ -0.39
USP43-205ENST00000574408 HSP90AB3PQ58FF7 597 aa12.6□□□□□ -0.39
USP43-205ENST00000574408 RBM8AQ9Y5S9 174 aaKnown RBP12.6□□□□□ -0.39
USP43-205ENST00000574408 WNK3Q9BYP7 1800 aa12.6□□□□□ -0.39
USP43-205ENST00000574408 NLRP10Q86W26 655 aa12.59□□□□□ -0.39
USP43-205ENST00000574408 DOT1LQ8TEK3 1739 aa12.59□□□□□ -0.39
USP43-205ENST00000574408 CASTP20810 708 aaKnown RBP12.59□□□□□ -0.39
USP43-205ENST00000574408 CUL4AQ13619 759 aa12.59□□□□□ -0.39
USP43-205ENST00000574408 TAF7LQ5H9L4 462 aa12.59□□□□□ -0.39
USP43-205ENST00000574408 DDX46Q7L014 1031 aaKnown RBP12.59□□□□□ -0.39
USP43-205ENST00000574408 NRAPQ86VF7 1730 aa12.59□□□□□ -0.39
USP43-205ENST00000574408 CPA1P15085 419 aa12.59□□□□□ -0.39
USP43-205ENST00000574408 DZIP3Q86Y13 1208 aaKnown RBP12.59□□□□□ -0.39
USP43-205ENST00000574408 JAKMIP1Q96N16 626 aaKnown RBP12.59□□□□□ -0.39
USP43-205ENST00000574408 HAUS7Q99871 368 aa12.59□□□□□ -0.39
USP43-205ENST00000574408 GPR108Q9NPR9 543 aa12.59□□□□□ -0.39
USP43-205ENST00000574408 CEP126Q9P2H0 1117 aa12.59□□□□□ -0.39
USP43-205ENST00000574408 CIAO1O76071 339 aa12.58□□□□□ -0.4
USP43-205ENST00000574408 BAG4O95429 457 aaKnown RBP12.58□□□□□ -0.4
USP43-205ENST00000574408 CYP2E1P05181 493 aaPredicted RBP12.58□□□□□ -0.4
USP43-205ENST00000574408 IL6STP40189 918 aaPredicted RBP12.58□□□□□ -0.4
USP43-205ENST00000574408 ZNF589Q86UQ0 364 aaPredicted RBP12.58□□□□□ -0.4
USP43-205ENST00000574408 GOLGA6L22H0YM25 854 aa12.58□□□□□ -0.4
USP43-205ENST00000574408 ZKSCAN1P17029 563 aaPredicted RBP12.58□□□□□ -0.4
USP43-205ENST00000574408 PLA2G12BQ9BX93 195 aa12.58□□□□□ -0.4
USP43-205ENST00000574408 MED23Q9ULK4 1368 aa12.58□□□□□ -0.4
USP43-205ENST00000574408 A0A1B0GUL7 405 aa12.58□□□□□ -0.4
USP43-205ENST00000574408 ATP6V1AP38606 617 aa12.58□□□□□ -0.4
USP43-205ENST00000574408 IFIT5Q13325 482 aaKnown RBP12.58□□□□□ -0.4
USP43-205ENST00000574408 NECTIN1Q15223 517 aa12.58□□□□□ -0.4
USP43-205ENST00000574408 ADCK5Q3MIX3 580 aa12.58□□□□□ -0.4
USP43-205ENST00000574408 CREB3L3Q68CJ9 461 aa12.58□□□□□ -0.4
USP43-205ENST00000574408 MAP4K1Q92918 833 aa12.58□□□□□ -0.4
USP43-205ENST00000574408 TTC14Q96N46 770 aa12.58□□□□□ -0.4
USP43-205ENST00000574408 LARP6Q9BRS8 491 aaKnown RBP12.58□□□□□ -0.4
USP43-205ENST00000574408 TRMT112Q9UI30 125 aaKnown RBP12.58□□□□□ -0.4
USP43-205ENST00000574408 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.57□□□□□ -0.4
USP43-205ENST00000574408 UBAP1LF5GYI3 381 aa12.57□□□□□ -0.4
USP43-205ENST00000574408 AK2P54819 239 aa12.57□□□□□ -0.4
USP43-205ENST00000574408 SNRKQ9NRH2 765 aa12.57□□□□□ -0.4
USP43-205ENST00000574408 CHGBP05060 677 aa12.57□□□□□ -0.4
USP43-205ENST00000574408 FOXD4L5Q5VV16 416 aaPredicted RBP12.57□□□□□ -0.4
USP43-205ENST00000574408 FOXD4L4Q8WXT5 416 aaPredicted RBP12.57□□□□□ -0.4
USP43-205ENST00000574408 INTS4Q96HW7 963 aaKnown RBP12.57□□□□□ -0.4
USP43-205ENST00000574408 ZNF609O15014 1411 aa12.57□□□□□ -0.4
USP43-205ENST00000574408 GOLIM4O00461 696 aa12.56□□□□□ -0.4
USP43-205ENST00000574408 CLEC17AQ6ZS10 378 aa12.56□□□□□ -0.4
USP43-205ENST00000574408 ZDHHC9Q9Y397 364 aa12.56□□□□□ -0.4
USP43-205ENST00000574408 CDHR2Q9BYE9 1310 aa12.56□□□□□ -0.4
USP43-205ENST00000574408 SLIT2O94813 1529 aa12.56□□□□□ -0.4
USP43-205ENST00000574408 LOC102724428A0A0B4J2F2 783 aa12.56□□□□□ -0.4
USP43-205ENST00000574408 IRS4O14654 1257 aaPredicted RBP12.56□□□□□ -0.4
USP43-205ENST00000574408 CSF1RP07333 972 aa12.56□□□□□ -0.4
USP43-205ENST00000574408 SIK1P57059 783 aa12.56□□□□□ -0.4
USP43-205ENST00000574408 BARGINQ6ZT62 677 aa12.56□□□□□ -0.4
USP43-205ENST00000574408 KCNB2Q92953 911 aa12.56□□□□□ -0.4
USP43-205ENST00000574408 CCDC87Q9NVE4 849 aa12.56□□□□□ -0.4
USP43-205ENST00000574408 SLC27A2O14975 620 aa12.56□□□□□ -0.4
USP43-205ENST00000574408 PTMSP20962 102 aa12.56□□□□□ -0.4
USP43-205ENST00000574408 KBTBD3Q8NAB2 608 aa12.56□□□□□ -0.4
USP43-205ENST00000574408 CYP46A1Q9Y6A2 500 aa12.56□□□□□ -0.4
USP43-205ENST00000574408 ERVV-1B6SEH8 477 aa12.55□□□□□ -0.4
USP43-205ENST00000574408 CRKLP46109 303 aaKnown RBP12.55□□□□□ -0.4
USP43-205ENST00000574408 FAM98CQ17RN3 349 aaKnown RBP12.55□□□□□ -0.4
USP43-205ENST00000574408 GORABQ5T7V8 394 aa12.55□□□□□ -0.4
USP43-205ENST00000574408 MCTP1Q6DN14 999 aa12.55□□□□□ -0.4
USP43-205ENST00000574408 RUFY3Q7L099 469 aa12.55□□□□□ -0.4
USP43-205ENST00000574408 C8orf37Q96NL8 207 aa12.55□□□□□ -0.4
USP43-205ENST00000574408 SEC62Q99442 399 aaKnown RBP12.55□□□□□ -0.4
USP43-205ENST00000574408 PDRG1Q9NUG6 133 aa12.55□□□□□ -0.4
USP43-205ENST00000574408 PAG1Q9NWQ8 432 aa12.55□□□□□ -0.4
USP43-205ENST00000574408 TAF5LO75529 589 aa12.55□□□□□ -0.4
USP43-205ENST00000574408 IFIT1P09914 478 aaKnown RBP12.55□□□□□ -0.4
USP43-205ENST00000574408 EIF5P55010 431 aaKnown RBP12.55□□□□□ -0.4
USP43-205ENST00000574408 CTSWP56202 376 aa12.55□□□□□ -0.4
USP43-205ENST00000574408 RNF20Q5VTR2 975 aa12.55□□□□□ -0.4
USP43-205ENST00000574408 CCDC129Q6ZRS4 1044 aa12.55□□□□□ -0.4
USP43-205ENST00000574408 TTLL11Q8NHH1 800 aa12.55□□□□□ -0.4
USP43-205ENST00000574408 NGLY1Q96IV0 654 aa12.55□□□□□ -0.4
USP43-205ENST00000574408 TM6SF1Q9BZW5 370 aa12.55□□□□□ -0.4
USP43-205ENST00000574408 GREM2Q9H772 168 aa12.55□□□□□ -0.4
USP43-205ENST00000574408 LIMCH1Q9UPQ0 1083 aa12.55□□□□□ -0.4
USP43-205ENST00000574408 RFX7Q2KHR2 1363 aa12.55□□□□□ -0.4
USP43-205ENST00000574408 ITGA6P23229 1130 aa12.55□□□□□ -0.4
USP43-205ENST00000574408 INTS5Q6P9B9 1019 aaKnown RBP12.55□□□□□ -0.4
USP43-205ENST00000574408 ZSWIM6Q9HCJ5 1215 aa12.55□□□□□ -0.4
USP43-205ENST00000574408 FBXO3Q9UK99 471 aa12.55□□□□□ -0.4
USP43-205ENST00000574408 KCNQ2O43526 872 aa12.54□□□□□ -0.4
USP43-205ENST00000574408 ITPK1Q13572 414 aa12.54□□□□□ -0.4
USP43-205ENST00000574408 UBN2Q6ZU65 1347 aa12.54□□□□□ -0.4
USP43-205ENST00000574408 ADORA1P30542 326 aa12.54□□□□□ -0.4
USP43-205ENST00000574408 AKAP2Q9Y2D5 859 aa12.54□□□□□ -0.4
USP43-205ENST00000574408 PALLDQ8WX93 1383 aa12.54□□□□□ -0.4
USP43-205ENST00000574408 FAM177BA6PVY3 158 aa12.53□□□□□ -0.4
USP43-205ENST00000574408 SKOR2Q2VWA4 1001 aaPredicted RBP12.53□□□□□ -0.4
USP43-205ENST00000574408 VPS53Q5VIR6 699 aa12.53□□□□□ -0.4
USP43-205ENST00000574408 LDHAL6AQ6ZMR3 332 aa12.53□□□□□ -0.4
USP43-205ENST00000574408 ANKRD18BA2A2Z9 1011 aa12.53□□□□□ -0.4
USP43-205ENST00000574408 MCMDC2Q4G0Z9 681 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms