RNA–Protein interactions for RNA: ENST00000574379.2

NCBP3-203, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 2

Gene NCBP3, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-203ENST00000574379 STARD3NLO95772 234 aa13.01□□□□□ -0.33
NCBP3-203ENST00000574379 SNRPA1P09661 255 aaKnown RBP13.01□□□□□ -0.33
NCBP3-203ENST00000574379 EIF4A1P60842 406 aaKnown RBP13.01□□□□□ -0.33
NCBP3-203ENST00000574379 CDC37L1Q7L3B6 337 aa13.01□□□□□ -0.33
NCBP3-203ENST00000574379 NBPF5PQ86XG9 351 aaPredicted RBP13.01□□□□□ -0.33
NCBP3-203ENST00000574379 TSPYL4Q9UJ04 414 aa13.01□□□□□ -0.33
NCBP3-203ENST00000574379 AKAP11Q9UKA4 1901 aa13.01□□□□□ -0.33
NCBP3-203ENST00000574379 USP48Q86UV5 1035 aa13□□□□□ -0.33
NCBP3-203ENST00000574379 NIM1KQ8IY84 436 aa13□□□□□ -0.33
NCBP3-203ENST00000574379 C2orf69Q8N8R5 385 aa13□□□□□ -0.33
NCBP3-203ENST00000574379 GPRC5DQ9NZD1 345 aa13□□□□□ -0.33
NCBP3-203ENST00000574379 USP16Q9Y5T5 823 aa13□□□□□ -0.33
NCBP3-203ENST00000574379 FAM177BA6PVY3 158 aa12.99□□□□□ -0.33
NCBP3-203ENST00000574379 FAM155AB1AL88 458 aaPredicted RBP12.99□□□□□ -0.33
NCBP3-203ENST00000574379 CHL1O00533 1208 aa12.99□□□□□ -0.33
NCBP3-203ENST00000574379 FBXO46Q6PJ61 603 aaPredicted RBP12.99□□□□□ -0.33
NCBP3-203ENST00000574379 DLK2Q6UY11 383 aa12.99□□□□□ -0.33
NCBP3-203ENST00000574379 FAM9BQ8IZU0 186 aa12.99□□□□□ -0.33
NCBP3-203ENST00000574379 CACNA1FO60840 1977 aa12.98□□□□□ -0.33
NCBP3-203ENST00000574379 CCER2I3L3R5 266 aa12.98□□□□□ -0.33
NCBP3-203ENST00000574379 A1BGP04217 495 aa12.98□□□□□ -0.33
NCBP3-203ENST00000574379 EIF5P55010 431 aaKnown RBP12.98□□□□□ -0.33
NCBP3-203ENST00000574379 CCDC27Q2M243 656 aa12.98□□□□□ -0.33
NCBP3-203ENST00000574379 DIEXFQ68CQ4 756 aaKnown RBP12.98□□□□□ -0.33
NCBP3-203ENST00000574379 ZNF296Q8WUU4 475 aaPredicted RBP12.98□□□□□ -0.33
NCBP3-203ENST00000574379 CSRNP1Q96S65 589 aa12.98□□□□□ -0.33
NCBP3-203ENST00000574379 BCL2L13Q9BXK5 485 aa12.98□□□□□ -0.33
NCBP3-203ENST00000574379 POTEFA5A3E0 1075 aa12.97□□□□□ -0.33
NCBP3-203ENST00000574379 TCERG1O14776 1098 aaKnown RBP12.97□□□□□ -0.33
NCBP3-203ENST00000574379 TBC1D8O95759 1140 aa12.97□□□□□ -0.33
NCBP3-203ENST00000574379 ZNF853P0CG23 659 aa12.97□□□□□ -0.33
NCBP3-203ENST00000574379 ALDH1B1P30837 517 aa12.97□□□□□ -0.33
NCBP3-203ENST00000574379 IL6STP40189 918 aaPredicted RBP12.97□□□□□ -0.33
NCBP3-203ENST00000574379 REM2Q8IYK8 340 aaPredicted RBP12.97□□□□□ -0.33
NCBP3-203ENST00000574379 GBA2Q9HCG7 927 aaPredicted RBP12.97□□□□□ -0.33
NCBP3-203ENST00000574379 ANKRD36CQ5JPF3 1778 aa12.97□□□□□ -0.33
NCBP3-203ENST00000574379 MKI67P46013 3256 aaKnown RBP12.96□□□□□ -0.33
NCBP3-203ENST00000574379 GMPSP49915 693 aaPredicted RBP12.96□□□□□ -0.33
NCBP3-203ENST00000574379 PSMD1Q99460 953 aa12.96□□□□□ -0.33
NCBP3-203ENST00000574379 LAS1LQ9Y4W2 734 aaKnown RBP12.96□□□□□ -0.33
NCBP3-203ENST00000574379 SZT2Q5T011 3432 aa12.96□□□□□ -0.33
NCBP3-203ENST00000574379 COL4A5P29400 1685 aa12.96□□□□□ -0.34
NCBP3-203ENST00000574379 NBPF26B4DH59 902 aa12.95□□□□□ -0.34
NCBP3-203ENST00000574379 GTF2E1P29083 439 aaPredicted RBP12.95□□□□□ -0.34
NCBP3-203ENST00000574379 PIP4K2AP48426 406 aaPredicted RBP12.95□□□□□ -0.34
NCBP3-203ENST00000574379 CALD1Q05682 793 aaKnown RBP12.95□□□□□ -0.34
NCBP3-203ENST00000574379 NBPF10Q6P3W6 841 aaKnown RBP12.95□□□□□ -0.34
NCBP3-203ENST00000574379 WWC1Q8IX03 1113 aa12.95□□□□□ -0.34
NCBP3-203ENST00000574379 MBIPQ9NS73 344 aa12.95□□□□□ -0.34
NCBP3-203ENST00000574379 IFT57Q9NWB7 429 aa12.95□□□□□ -0.34
NCBP3-203ENST00000574379 PPIP5K2O43314 1243 aa12.94□□□□□ -0.34
NCBP3-203ENST00000574379 GNAI1P63096 354 aa12.94□□□□□ -0.34
NCBP3-203ENST00000574379 KRT24Q2M2I5 525 aa12.94□□□□□ -0.34
NCBP3-203ENST00000574379 SLC10A3P09131 477 aa12.93□□□□□ -0.34
NCBP3-203ENST00000574379 CHRDL2Q6WN34 429 aa12.93□□□□□ -0.34
NCBP3-203ENST00000574379 TRPM4Q8TD43 1214 aa12.93□□□□□ -0.34
NCBP3-203ENST00000574379 ZC3H15Q8WU90 426 aaKnown RBP12.93□□□□□ -0.34
NCBP3-203ENST00000574379 A0A0C4DFX4 3053 aa12.92□□□□□ -0.34
NCBP3-203ENST00000574379 IL16Q14005 1332 aa12.92□□□□□ -0.34
NCBP3-203ENST00000574379 ERBB4Q15303 1308 aa12.92□□□□□ -0.34
NCBP3-203ENST00000574379 HIRAP54198 1017 aaPredicted RBP12.92□□□□□ -0.34
NCBP3-203ENST00000574379 AOC3Q16853 763 aa12.92□□□□□ -0.34
NCBP3-203ENST00000574379 KRT26Q7Z3Y9 468 aa12.92□□□□□ -0.34
NCBP3-203ENST00000574379 MIER1Q8N108 512 aa12.92□□□□□ -0.34
NCBP3-203ENST00000574379 PITPNM2Q9BZ72 1349 aa12.91□□□□□ -0.34
NCBP3-203ENST00000574379 CAMTA2O94983 1202 aa12.91□□□□□ -0.34
NCBP3-203ENST00000574379 HOXB7P09629 217 aa12.91□□□□□ -0.34
NCBP3-203ENST00000574379 EN2P19622 333 aaPredicted RBP12.91□□□□□ -0.34
NCBP3-203ENST00000574379 MNX1P50219 401 aaPredicted RBP12.91□□□□□ -0.34
NCBP3-203ENST00000574379 TPTE2Q6XPS3 522 aa12.91□□□□□ -0.34
NCBP3-203ENST00000574379 DZIP3Q86Y13 1208 aaKnown RBP12.91□□□□□ -0.34
NCBP3-203ENST00000574379 NGEFQ8N5V2 710 aa12.91□□□□□ -0.34
NCBP3-203ENST00000574379 TMX4Q9H1E5 349 aaPredicted RBP12.91□□□□□ -0.34
NCBP3-203ENST00000574379 PGAP2Q9UHJ9 254 aa12.91□□□□□ -0.34
NCBP3-203ENST00000574379 SSUH2Q9Y2M2 353 aa12.91□□□□□ -0.34
NCBP3-203ENST00000574379 SALL2Q9Y467 1007 aaPredicted RBP12.91□□□□□ -0.34
NCBP3-203ENST00000574379 ADM5C9JUS6 153 aa12.9□□□□□ -0.34
NCBP3-203ENST00000574379 H0YGN5 161 aa12.9□□□□□ -0.34
NCBP3-203ENST00000574379 H7C1D1 291 aa12.9□□□□□ -0.34
NCBP3-203ENST00000574379 GPR25O00155 361 aa12.9□□□□□ -0.34
NCBP3-203ENST00000574379 RAD17O75943 681 aa12.9□□□□□ -0.34
NCBP3-203ENST00000574379 EIF2S2P20042 333 aaKnown RBP12.9□□□□□ -0.34
NCBP3-203ENST00000574379 CXCL9Q07325 125 aa12.9□□□□□ -0.34
NCBP3-203ENST00000574379 PDIA6Q15084 440 aa12.9□□□□□ -0.34
NCBP3-203ENST00000574379 INTS3Q68E01 1043 aaKnown RBP12.9□□□□□ -0.34
NCBP3-203ENST00000574379 CC2D2BQ6DHV5 1058 aa12.9□□□□□ -0.34
NCBP3-203ENST00000574379 WDR63Q8IWG1 891 aa12.9□□□□□ -0.34
NCBP3-203ENST00000574379 RPGRQ92834 1020 aaKnown RBP12.9□□□□□ -0.34
NCBP3-203ENST00000574379 DCPSQ96C86 337 aaKnown RBP12.9□□□□□ -0.34
NCBP3-203ENST00000574379 FKTNO75072 461 aa12.89□□□□□ -0.35
NCBP3-203ENST00000574379 RBM26Q5T8P6 1007 aaKnown RBP12.89□□□□□ -0.35
NCBP3-203ENST00000574379 DUSP27Q5VZP5 1158 aa12.89□□□□□ -0.35
NCBP3-203ENST00000574379 LRP10Q7Z4F1 713 aa12.89□□□□□ -0.35
NCBP3-203ENST00000574379 CNOT7Q9UIV1 285 aaKnown RBP12.89□□□□□ -0.35
NCBP3-203ENST00000574379 ZNF652Q9Y2D9 606 aa12.89□□□□□ -0.35
NCBP3-203ENST00000574379 PAPPA2Q9BXP8 1791 aa12.89□□□□□ -0.35
NCBP3-203ENST00000574379 ZNF521Q96K83 1311 aa12.88□□□□□ -0.35
NCBP3-203ENST00000574379 SHTN1A0MZ66 631 aa12.88□□□□□ -0.35
NCBP3-203ENST00000574379 RGL2O15211 777 aa12.88□□□□□ -0.35
NCBP3-203ENST00000574379 MYL6BP14649 208 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms