RNA–Protein interactions for RNA: ENST00000573126.1

RPAIN-212, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 2,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-212ENST00000573126 SEC62Q99442 399 aaKnown RBP13.38□□□□□ -0.27
RPAIN-212ENST00000573126 CHMP3Q9Y3E7 222 aa13.38□□□□□ -0.27
RPAIN-212ENST00000573126 COL15A1P39059 1388 aa13.38□□□□□ -0.27
RPAIN-212ENST00000573126 TMEM94Q12767 1356 aa13.38□□□□□ -0.27
RPAIN-212ENST00000573126 RPS6KB1P23443 525 aa13.38□□□□□ -0.27
RPAIN-212ENST00000573126 TOB2Q14106 344 aaPredicted RBP13.38□□□□□ -0.27
RPAIN-212ENST00000573126 LMTK3Q96Q04 1460 aa13.38□□□□□ -0.27
RPAIN-212ENST00000573126 ZNF500O60304 480 aaPredicted RBP13.37□□□□□ -0.27
RPAIN-212ENST00000573126 ATP5JP18859 108 aa13.37□□□□□ -0.27
RPAIN-212ENST00000573126 DDX46Q7L014 1031 aaKnown RBP13.37□□□□□ -0.27
RPAIN-212ENST00000573126 LMBR1LQ6UX01 489 aa13.37□□□□□ -0.27
RPAIN-212ENST00000573126 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.37□□□□□ -0.27
RPAIN-212ENST00000573126 FAM184AQ8NB25 1140 aa13.37□□□□□ -0.27
RPAIN-212ENST00000573126 ADAMTSL3P82987 1691 aa13.36□□□□□ -0.27
RPAIN-212ENST00000573126 MST1RQ04912 1400 aa13.36□□□□□ -0.27
RPAIN-212ENST00000573126 RABL6Q3YEC7 729 aaPredicted RBP13.36□□□□□ -0.27
RPAIN-212ENST00000573126 R3HCC1Q9Y3T6 440 aaKnown RBP13.36□□□□□ -0.27
RPAIN-212ENST00000573126 SCN11AQ9UI33 1791 aa13.36□□□□□ -0.27
RPAIN-212ENST00000573126 PLCB2Q00722 1185 aa13.35□□□□□ -0.27
RPAIN-212ENST00000573126 ANKRD1Q15327 319 aa13.35□□□□□ -0.27
RPAIN-212ENST00000573126 CSPP1Q1MSJ5 1256 aa13.35□□□□□ -0.27
RPAIN-212ENST00000573126 TTC6Q86TZ1 520 aa13.35□□□□□ -0.27
RPAIN-212ENST00000573126 KIF1AQ12756 1690 aa13.35□□□□□ -0.27
RPAIN-212ENST00000573126 ALS2Q96Q42 1657 aa13.35□□□□□ -0.27
RPAIN-212ENST00000573126 MRC1P22897 1456 aa13.35□□□□□ -0.27
RPAIN-212ENST00000573126 SLFNL1Q499Z3 407 aa13.35□□□□□ -0.27
RPAIN-212ENST00000573126 PLBD2Q8NHP8 589 aa13.35□□□□□ -0.27
RPAIN-212ENST00000573126 HMG20BQ9P0W2 317 aa13.35□□□□□ -0.27
RPAIN-212ENST00000573126 NBPF26B4DH59 902 aa13.34□□□□□ -0.27
RPAIN-212ENST00000573126 LETM1O95202 739 aaPredicted RBP13.34□□□□□ -0.27
RPAIN-212ENST00000573126 NBPF14Q5TI25 921 aa13.34□□□□□ -0.27
RPAIN-212ENST00000573126 NBPF10Q6P3W6 841 aaKnown RBP13.34□□□□□ -0.27
RPAIN-212ENST00000573126 NBPF15Q8N660 670 aa13.34□□□□□ -0.27
RPAIN-212ENST00000573126 ZNF609O15014 1411 aa13.34□□□□□ -0.27
RPAIN-212ENST00000573126 CASP7P55210 303 aa13.34□□□□□ -0.27
RPAIN-212ENST00000573126 KRT85P78386 507 aa13.34□□□□□ -0.27
RPAIN-212ENST00000573126 TTLL7Q6ZT98 887 aa13.34□□□□□ -0.27
RPAIN-212ENST00000573126 ZNF830Q96NB3 372 aaPredicted RBP13.34□□□□□ -0.27
RPAIN-212ENST00000573126 NEUROD6Q96NK8 337 aa13.34□□□□□ -0.27
RPAIN-212ENST00000573126 LRRC2Q9BYS8 371 aa13.34□□□□□ -0.27
RPAIN-212ENST00000573126 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.34□□□□□ -0.27
RPAIN-212ENST00000573126 JCADQ9P266 1359 aa13.34□□□□□ -0.27
RPAIN-212ENST00000573126 JAK2O60674 1132 aa13.33□□□□□ -0.27
RPAIN-212ENST00000573126 ADCY5O95622 1261 aa13.33□□□□□ -0.27
RPAIN-212ENST00000573126 PDCP20941 246 aa13.33□□□□□ -0.27
RPAIN-212ENST00000573126 MCM5P33992 734 aa13.33□□□□□ -0.27
RPAIN-212ENST00000573126 USPL1Q5W0Q7 1092 aa13.33□□□□□ -0.27
RPAIN-212ENST00000573126 TFIP11Q9UBB9 837 aaKnown RBP13.33□□□□□ -0.27
RPAIN-212ENST00000573126 TPM2P07951 284 aa13.33□□□□□ -0.28
RPAIN-212ENST00000573126 CYP21A2P08686 494 aa13.33□□□□□ -0.28
RPAIN-212ENST00000573126 TSGA10IPQ3SY00 556 aa13.33□□□□□ -0.28
RPAIN-212ENST00000573126 NEK1Q96PY6 1258 aa13.33□□□□□ -0.28
RPAIN-212ENST00000573126 HAUS7Q99871 368 aa13.33□□□□□ -0.28
RPAIN-212ENST00000573126 TIMM10P62072 90 aa13.33□□□□□ -0.28
RPAIN-212ENST00000573126 CAMK4Q16566 473 aa13.33□□□□□ -0.28
RPAIN-212ENST00000573126 UVSSAQ2YD98 709 aa13.33□□□□□ -0.28
RPAIN-212ENST00000573126 FUCA2Q9BTY2 467 aa13.33□□□□□ -0.28
RPAIN-212ENST00000573126 ZBTB3Q9H5J0 574 aa13.33□□□□□ -0.28
RPAIN-212ENST00000573126 GOLIM4O00461 696 aa13.32□□□□□ -0.28
RPAIN-212ENST00000573126 A1BGP04217 495 aa13.32□□□□□ -0.28
RPAIN-212ENST00000573126 HSP90B1P14625 803 aaKnown RBP13.32□□□□□ -0.28
RPAIN-212ENST00000573126 MCMDC2Q4G0Z9 681 aa13.32□□□□□ -0.28
RPAIN-212ENST00000573126 TNS3Q68CZ2 1445 aa13.32□□□□□ -0.28
RPAIN-212ENST00000573126 LIG1P18858 919 aa13.32□□□□□ -0.28
RPAIN-212ENST00000573126 FOXO4P98177 505 aa13.32□□□□□ -0.28
RPAIN-212ENST00000573126 KRT32Q14532 448 aa13.32□□□□□ -0.28
RPAIN-212ENST00000573126 HSP90AA2PQ14568 343 aaPredicted RBP13.32□□□□□ -0.28
RPAIN-212ENST00000573126 Q6ZUG5 572 aa13.32□□□□□ -0.28
RPAIN-212ENST00000573126 DDX11Q96FC9 970 aa13.32□□□□□ -0.28
RPAIN-212ENST00000573126 TTC12Q9H892 705 aaPredicted RBP13.31□□□□□ -0.28
RPAIN-212ENST00000573126 FGD1P98174 961 aa13.31□□□□□ -0.28
RPAIN-212ENST00000573126 ATG9AQ7Z3C6 839 aa13.31□□□□□ -0.28
RPAIN-212ENST00000573126 KBTBD3Q8NAB2 608 aa13.31□□□□□ -0.28
RPAIN-212ENST00000573126 BRF1Q92994 677 aa13.31□□□□□ -0.28
RPAIN-212ENST00000573126 GTF3C6Q969F1 213 aa13.31□□□□□ -0.28
RPAIN-212ENST00000573126 ZNF594Q96JF6 807 aaPredicted RBP13.31□□□□□ -0.28
RPAIN-212ENST00000573126 ALDH8A1Q9H2A2 487 aaPredicted RBP13.31□□□□□ -0.28
RPAIN-212ENST00000573126 SPATA31A3Q5VYP0 1347 aa13.3□□□□□ -0.28
RPAIN-212ENST00000573126 KDM4AO75164 1064 aa13.3□□□□□ -0.28
RPAIN-212ENST00000573126 LRRC24Q50LG9 513 aa13.3□□□□□ -0.28
RPAIN-212ENST00000573126 TOM1L2Q6ZVM7 507 aa13.3□□□□□ -0.28
RPAIN-212ENST00000573126 CADPS2Q86UW7 1296 aa13.3□□□□□ -0.28
RPAIN-212ENST00000573126 SPATA32Q96LK8 384 aa13.3□□□□□ -0.28
RPAIN-212ENST00000573126 CWC25Q9NXE8 425 aaPredicted RBP13.3□□□□□ -0.28
RPAIN-212ENST00000573126 U3KPZ7 1027 aaPredicted RBP13.3□□□□□ -0.28
RPAIN-212ENST00000573126 COL18A1P39060 1754 aa13.3□□□□□ -0.28
RPAIN-212ENST00000573126 H7C1W4 665 aa13.3□□□□□ -0.28
RPAIN-212ENST00000573126 KIAA2012Q0VF49 1180 aa13.3□□□□□ -0.28
RPAIN-212ENST00000573126 STOX1Q6ZVD7 989 aa13.3□□□□□ -0.28
RPAIN-212ENST00000573126 ZNF330Q9Y3S2 320 aaPredicted RBP13.3□□□□□ -0.28
RPAIN-212ENST00000573126 GOLGA6L4A6NEF3 574 aa13.29□□□□□ -0.28
RPAIN-212ENST00000573126 AP5Z1O43299 807 aa13.29□□□□□ -0.28
RPAIN-212ENST00000573126 PPFIA3O75145 1194 aa13.29□□□□□ -0.28
RPAIN-212ENST00000573126 CKAP2LQ8IYA6 745 aa13.29□□□□□ -0.28
RPAIN-212ENST00000573126 PRDM11Q9NQV5 511 aa13.29□□□□□ -0.28
RPAIN-212ENST00000573126 PAG1Q9NWQ8 432 aa13.29□□□□□ -0.28
RPAIN-212ENST00000573126 DACT1Q9NYF0 836 aa13.29□□□□□ -0.28
RPAIN-212ENST00000573126 A0A0G2JLW4 131 aa13.29□□□□□ -0.28
RPAIN-212ENST00000573126 CCDC192P0DO97 292 aa13.29□□□□□ -0.28
RPAIN-212ENST00000573126 NUP62CLQ9H1M0 184 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms