RNA–Protein interactions for RNA: ENST00000572158.5

TOM1L1-210, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TOM1L1, Length 1,521 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-210ENST00000572158 AAMPQ13685 434 aa12.21□□□□□ -0.45
TOM1L1-210ENST00000572158 RABL6Q3YEC7 729 aaPredicted RBP12.21□□□□□ -0.45
TOM1L1-210ENST00000572158 ERICH6BQ5W0A0 696 aa12.21□□□□□ -0.45
TOM1L1-210ENST00000572158 TPTE2Q6XPS3 522 aa12.21□□□□□ -0.45
TOM1L1-210ENST00000572158 SGIP1Q9BQI5 828 aa12.21□□□□□ -0.45
TOM1L1-210ENST00000572158 TNRC6CQ9HCJ0 1690 aaKnown RBP12.21□□□□□ -0.45
TOM1L1-210ENST00000572158 IGHDP01880 384 aa12.21□□□□□ -0.46
TOM1L1-210ENST00000572158 CSF1RP07333 972 aa12.21□□□□□ -0.46
TOM1L1-210ENST00000572158 ATP8B2P98198 1209 aa12.21□□□□□ -0.46
TOM1L1-210ENST00000572158 MTX1Q13505 466 aa12.21□□□□□ -0.46
TOM1L1-210ENST00000572158 NYXQ9GZU5 481 aa12.21□□□□□ -0.46
TOM1L1-210ENST00000572158 CHMP4BQ9H444 224 aaKnown RBP12.21□□□□□ -0.46
TOM1L1-210ENST00000572158 LAMB2P55268 1798 aa12.2□□□□□ -0.46
TOM1L1-210ENST00000572158 COL4A1P02462 1669 aa12.2□□□□□ -0.46
TOM1L1-210ENST00000572158 LMBR1LQ6UX01 489 aa12.2□□□□□ -0.46
TOM1L1-210ENST00000572158 CNBD1Q8NA66 436 aa12.2□□□□□ -0.46
TOM1L1-210ENST00000572158 TTLL11Q8NHH1 800 aa12.2□□□□□ -0.46
TOM1L1-210ENST00000572158 MTFR1LQ9H019 292 aa12.2□□□□□ -0.46
TOM1L1-210ENST00000572158 ANKRD31Q8N7Z5 1873 aa12.19□□□□□ -0.46
TOM1L1-210ENST00000572158 PDE8AO60658 829 aa12.19□□□□□ -0.46
TOM1L1-210ENST00000572158 PTGER2P43116 358 aa12.19□□□□□ -0.46
TOM1L1-210ENST00000572158 RFX5P48382 616 aaPredicted RBP12.19□□□□□ -0.46
TOM1L1-210ENST00000572158 RPAP2Q8IXW5 612 aaPredicted RBP12.19□□□□□ -0.46
TOM1L1-210ENST00000572158 SSH3Q8TE77 659 aa12.19□□□□□ -0.46
TOM1L1-210ENST00000572158 PARP3Q9Y6F1 533 aa12.19□□□□□ -0.46
TOM1L1-210ENST00000572158 MYH3P11055 1940 aa12.18□□□□□ -0.46
TOM1L1-210ENST00000572158 KLRG2A4D1S0 409 aaPredicted RBP12.18□□□□□ -0.46
TOM1L1-210ENST00000572158 GTF2E1P29083 439 aaPredicted RBP12.18□□□□□ -0.46
TOM1L1-210ENST00000572158 CTSWP56202 376 aa12.18□□□□□ -0.46
TOM1L1-210ENST00000572158 CCDC85AQ96PX6 553 aaPredicted RBP12.18□□□□□ -0.46
TOM1L1-210ENST00000572158 PPP4R2Q9NY27 417 aa12.18□□□□□ -0.46
TOM1L1-210ENST00000572158 RIC1Q4ADV7 1423 aa12.18□□□□□ -0.46
TOM1L1-210ENST00000572158 SRGAP3O43295 1099 aa12.17□□□□□ -0.46
TOM1L1-210ENST00000572158 HDAC1Q13547 482 aaPredicted RBP12.17□□□□□ -0.46
TOM1L1-210ENST00000572158 SF3B3Q15393 1217 aaKnown RBP12.17□□□□□ -0.46
TOM1L1-210ENST00000572158 B4GALNT3Q6L9W6 998 aa12.17□□□□□ -0.46
TOM1L1-210ENST00000572158 GREM2Q9H772 168 aa12.17□□□□□ -0.46
TOM1L1-210ENST00000572158 FAM161AQ3B820 660 aa12.16□□□□□ -0.46
TOM1L1-210ENST00000572158 CRY2Q49AN0 593 aa12.16□□□□□ -0.46
TOM1L1-210ENST00000572158 KLHDC4Q8TBB5 520 aa12.16□□□□□ -0.46
TOM1L1-210ENST00000572158 SEC31BQ9NQW1 1179 aa12.16□□□□□ -0.46
TOM1L1-210ENST00000572158 HDAC5Q9UQL6 1122 aa12.16□□□□□ -0.46
TOM1L1-210ENST00000572158 TAF1P21675 1872 aa12.16□□□□□ -0.46
TOM1L1-210ENST00000572158 ST5P78524 1137 aa12.16□□□□□ -0.46
TOM1L1-210ENST00000572158 ZNF594Q96JF6 807 aaPredicted RBP12.16□□□□□ -0.46
TOM1L1-210ENST00000572158 BRIP1Q9BX63 1249 aa12.16□□□□□ -0.46
TOM1L1-210ENST00000572158 PA2G4Q9UQ80 394 aaKnown RBP12.16□□□□□ -0.46
TOM1L1-210ENST00000572158 KDM2BQ8NHM5 1336 aa12.16□□□□□ -0.46
TOM1L1-210ENST00000572158 C10orf71Q711Q0 1435 aa12.15□□□□□ -0.46
TOM1L1-210ENST00000572158 RTL9Q8NET4 1388 aa12.15□□□□□ -0.46
TOM1L1-210ENST00000572158 PTPN12Q05209 780 aaKnown RBP12.15□□□□□ -0.46
TOM1L1-210ENST00000572158 NLRP3Q96P20 1036 aa12.15□□□□□ -0.46
TOM1L1-210ENST00000572158 NPHP1O15259 732 aa12.14□□□□□ -0.47
TOM1L1-210ENST00000572158 ITGA6P23229 1130 aa12.14□□□□□ -0.47
TOM1L1-210ENST00000572158 SLC51AQ86UW1 340 aa12.14□□□□□ -0.47
TOM1L1-210ENST00000572158 PUS3Q9BZE2 481 aaKnown RBP12.14□□□□□ -0.47
TOM1L1-210ENST00000572158 DCTPP1Q9H773 170 aa12.14□□□□□ -0.47
TOM1L1-210ENST00000572158 CHMP3Q9Y3E7 222 aa12.14□□□□□ -0.47
TOM1L1-210ENST00000572158 COL11A2P13942 1736 aaPredicted RBP12.14□□□□□ -0.47
TOM1L1-210ENST00000572158 KIF13BQ9NQT8 1826 aa12.13□□□□□ -0.47
TOM1L1-210ENST00000572158 CCDC152Q4G0S7 254 aa12.13□□□□□ -0.47
TOM1L1-210ENST00000572158 CCDC136Q96JN2 1154 aa12.13□□□□□ -0.47
TOM1L1-210ENST00000572158 RWDD1Q9H446 243 aaPredicted RBP12.13□□□□□ -0.47
TOM1L1-210ENST00000572158 COPRSQ9NQ92 184 aa12.13□□□□□ -0.47
TOM1L1-210ENST00000572158 NOP58Q9Y2X3 529 aaKnown RBP12.13□□□□□ -0.47
TOM1L1-210ENST00000572158 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.13□□□□□ -0.47
TOM1L1-210ENST00000572158 SRCAPQ6ZRS2 3230 aa12.13□□□□□ -0.47
TOM1L1-210ENST00000572158 KIAA1551Q9HCM1 1747 aa12.12□□□□□ -0.47
TOM1L1-210ENST00000572158 SRGNP10124 158 aa12.12□□□□□ -0.47
TOM1L1-210ENST00000572158 HSP90B1P14625 803 aaKnown RBP12.12□□□□□ -0.47
TOM1L1-210ENST00000572158 HOXA10P31260 410 aaPredicted RBP12.12□□□□□ -0.47
TOM1L1-210ENST00000572158 IFIT5Q13325 482 aaKnown RBP12.12□□□□□ -0.47
TOM1L1-210ENST00000572158 ATG9AQ7Z3C6 839 aa12.12□□□□□ -0.47
TOM1L1-210ENST00000572158 SMC5Q8IY18 1101 aa12.12□□□□□ -0.47
TOM1L1-210ENST00000572158 CELF1Q92879 486 aaKnown RBP12.12□□□□□ -0.47
TOM1L1-210ENST00000572158 EXOC6BQ9Y2D4 811 aa12.12□□□□□ -0.47
TOM1L1-210ENST00000572158 LRP5O75197 1615 aa12.12□□□□□ -0.47
TOM1L1-210ENST00000572158 HMMRO75330 724 aa12.11□□□□□ -0.47
TOM1L1-210ENST00000572158 KCNA3P22001 575 aa12.11□□□□□ -0.47
TOM1L1-210ENST00000572158 POLD1P28340 1107 aa12.11□□□□□ -0.47
TOM1L1-210ENST00000572158 CHRNA5P30532 468 aa12.11□□□□□ -0.47
TOM1L1-210ENST00000572158 CCDC57Q2TAC2 916 aa12.11□□□□□ -0.47
TOM1L1-210ENST00000572158 LRRC24Q50LG9 513 aa12.11□□□□□ -0.47
TOM1L1-210ENST00000572158 SIL1Q9H173 461 aa12.11□□□□□ -0.47
TOM1L1-210ENST00000572158 SPON1Q9HCB6 807 aa12.11□□□□□ -0.47
TOM1L1-210ENST00000572158 ANKRD18BA2A2Z9 1011 aa12.11□□□□□ -0.47
TOM1L1-210ENST00000572158 SURF6O75683 361 aaKnown RBP12.11□□□□□ -0.47
TOM1L1-210ENST00000572158 PDE6BP35913 854 aa12.11□□□□□ -0.47
TOM1L1-210ENST00000572158 EIF5BO60841 1220 aaKnown RBP12.1□□□□□ -0.47
TOM1L1-210ENST00000572158 SASH1O94885 1247 aa12.1□□□□□ -0.47
TOM1L1-210ENST00000572158 C2CD5Q86YS7 1000 aa12.1□□□□□ -0.47
TOM1L1-210ENST00000572158 RIPOR2Q9Y4F9 1068 aa12.1□□□□□ -0.47
TOM1L1-210ENST00000572158 SPEF2Q9C093 1822 aa12.09□□□□□ -0.47
TOM1L1-210ENST00000572158 A0A0G2JLW4 131 aa12.09□□□□□ -0.47
TOM1L1-210ENST00000572158 EYA2O00167 538 aa12.09□□□□□ -0.47
TOM1L1-210ENST00000572158 NPR1P16066 1061 aa12.09□□□□□ -0.47
TOM1L1-210ENST00000572158 RPS8P62241 208 aaKnown RBP12.09□□□□□ -0.47
TOM1L1-210ENST00000572158 DDX46Q7L014 1031 aaKnown RBP12.09□□□□□ -0.47
TOM1L1-210ENST00000572158 SKAP1Q86WV1 359 aa12.09□□□□□ -0.47
TOM1L1-210ENST00000572158 CRAMP1Q96RY5 1269 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms