RNA–Protein interactions for RNA: ENST00000569990.2

HCCAT5-201, hepatocellular carcinoma associated transcript 5, humanhuman

TSL 1 (best) BASIC

Gene HCCAT5, Length 1,079 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCCAT5-201ENST00000569990 SMC4Q9NTJ3 1288 aa12.21□□□□□ -0.45
HCCAT5-201ENST00000569990 PTPRCP08575 1304 aa12.2□□□□□ -0.46
HCCAT5-201ENST00000569990 IRS4O14654 1257 aaPredicted RBP12.2□□□□□ -0.46
HCCAT5-201ENST00000569990 RARSP54136 660 aaKnown RBP12.2□□□□□ -0.46
HCCAT5-201ENST00000569990 BEND3Q5T5X7 828 aa12.2□□□□□ -0.46
HCCAT5-201ENST00000569990 ARHGAP27Q6ZUM4 889 aa12.2□□□□□ -0.46
HCCAT5-201ENST00000569990 LAMB2P55268 1798 aa12.2□□□□□ -0.46
HCCAT5-201ENST00000569990 SLX4Q8IY92 1834 aa12.19□□□□□ -0.46
HCCAT5-201ENST00000569990 C21orf2O43822 256 aa12.19□□□□□ -0.46
HCCAT5-201ENST00000569990 ALDH1B1P30837 517 aa12.19□□□□□ -0.46
HCCAT5-201ENST00000569990 BRPF1P55201 1214 aaPredicted RBP12.19□□□□□ -0.46
HCCAT5-201ENST00000569990 GCKRQ14397 625 aa12.19□□□□□ -0.46
HCCAT5-201ENST00000569990 C7orf43Q8WVR3 580 aa12.19□□□□□ -0.46
HCCAT5-201ENST00000569990 JARID2Q92833 1246 aaPredicted RBP12.19□□□□□ -0.46
HCCAT5-201ENST00000569990 RBM17Q96I25 401 aaKnown RBP12.19□□□□□ -0.46
HCCAT5-201ENST00000569990 CRAMP1Q96RY5 1269 aa12.19□□□□□ -0.46
HCCAT5-201ENST00000569990 CDHR2Q9BYE9 1310 aa12.18□□□□□ -0.46
HCCAT5-201ENST00000569990 CHD4Q14839 1912 aa12.18□□□□□ -0.46
HCCAT5-201ENST00000569990 H7C1W4 665 aa12.18□□□□□ -0.46
HCCAT5-201ENST00000569990 HSP90B1P14625 803 aaKnown RBP12.18□□□□□ -0.46
HCCAT5-201ENST00000569990 YY1P25490 414 aa12.18□□□□□ -0.46
HCCAT5-201ENST00000569990 SF3B3Q15393 1217 aaKnown RBP12.18□□□□□ -0.46
HCCAT5-201ENST00000569990 SLC4A10Q6U841 1118 aa12.18□□□□□ -0.46
HCCAT5-201ENST00000569990 CACNA1SQ13698 1873 aa12.18□□□□□ -0.46
HCCAT5-201ENST00000569990 NFKBIEO00221 500 aa12.17□□□□□ -0.46
HCCAT5-201ENST00000569990 PDE8AO60658 829 aa12.17□□□□□ -0.46
HCCAT5-201ENST00000569990 CASP7P55210 303 aa12.17□□□□□ -0.46
HCCAT5-201ENST00000569990 UBE3BQ7Z3V4 1068 aa12.17□□□□□ -0.46
HCCAT5-201ENST00000569990 NOB1Q9ULX3 412 aaKnown RBP12.17□□□□□ -0.46
HCCAT5-201ENST00000569990 ABCC4O15439 1325 aa12.16□□□□□ -0.46
HCCAT5-201ENST00000569990 KIF16BQ96L93 1317 aa12.16□□□□□ -0.46
HCCAT5-201ENST00000569990 ALDH1L1O75891 902 aa12.16□□□□□ -0.46
HCCAT5-201ENST00000569990 RASSF7Q02833 373 aa12.16□□□□□ -0.46
HCCAT5-201ENST00000569990 CCDC93Q567U6 631 aa12.16□□□□□ -0.46
HCCAT5-201ENST00000569990 SOGA3Q5TF21 947 aa12.16□□□□□ -0.46
HCCAT5-201ENST00000569990 DDX46Q7L014 1031 aaKnown RBP12.16□□□□□ -0.46
HCCAT5-201ENST00000569990 SRCIN1Q9C0H9 1055 aa12.16□□□□□ -0.46
HCCAT5-201ENST00000569990 SNED1Q8TER0 1413 aa12.16□□□□□ -0.46
HCCAT5-201ENST00000569990 PPEF1O14829 653 aaPredicted RBP12.15□□□□□ -0.46
HCCAT5-201ENST00000569990 GRAPQ13588 217 aa12.15□□□□□ -0.46
HCCAT5-201ENST00000569990 OLFM4Q6UX06 510 aa12.15□□□□□ -0.46
HCCAT5-201ENST00000569990 GRAPLQ8TC17 118 aaPredicted RBP12.15□□□□□ -0.46
HCCAT5-201ENST00000569990 FER1L6Q2WGJ9 1857 aa12.14□□□□□ -0.47
HCCAT5-201ENST00000569990 LTBP3Q9NS15 1303 aa12.14□□□□□ -0.47
HCCAT5-201ENST00000569990 GRM8O00222 908 aa12.14□□□□□ -0.47
HCCAT5-201ENST00000569990 BCAR3O75815 825 aa12.14□□□□□ -0.47
HCCAT5-201ENST00000569990 BBOX1O75936 387 aa12.14□□□□□ -0.47
HCCAT5-201ENST00000569990 PRELPP51888 382 aa12.14□□□□□ -0.47
HCCAT5-201ENST00000569990 CTSWP56202 376 aa12.14□□□□□ -0.47
HCCAT5-201ENST00000569990 CCDC152Q4G0S7 254 aa12.14□□□□□ -0.47
HCCAT5-201ENST00000569990 CC2D2BQ6DHV5 1058 aa12.14□□□□□ -0.47
HCCAT5-201ENST00000569990 SLC51AQ86UW1 340 aa12.14□□□□□ -0.47
HCCAT5-201ENST00000569990 ARHGAP45Q92619 1136 aa12.14□□□□□ -0.47
HCCAT5-201ENST00000569990 PLA2G12BQ9BX93 195 aa12.14□□□□□ -0.47
HCCAT5-201ENST00000569990 API5Q9BZZ5 524 aaKnown RBP12.14□□□□□ -0.47
HCCAT5-201ENST00000569990 COL4A1P02462 1669 aa12.13□□□□□ -0.47
HCCAT5-201ENST00000569990 CD44P16070 742 aaKnown RBP12.13□□□□□ -0.47
HCCAT5-201ENST00000569990 C9orf131Q5VYM1 1079 aa12.13□□□□□ -0.47
HCCAT5-201ENST00000569990 LHX8Q68G74 356 aa12.13□□□□□ -0.47
HCCAT5-201ENST00000569990 RTKN2Q8IZC4 609 aa12.13□□□□□ -0.47
HCCAT5-201ENST00000569990 TTLL11Q8NHH1 800 aa12.13□□□□□ -0.47
HCCAT5-201ENST00000569990 CELF1Q92879 486 aaKnown RBP12.13□□□□□ -0.47
HCCAT5-201ENST00000569990 TAOK3Q9H2K8 898 aa12.13□□□□□ -0.47
HCCAT5-201ENST00000569990 SEC31BQ9NQW1 1179 aa12.13□□□□□ -0.47
HCCAT5-201ENST00000569990 C9orf78Q9NZ63 289 aaPredicted RBP12.13□□□□□ -0.47
HCCAT5-201ENST00000569990 ATP6V0A2Q9Y487 856 aa12.13□□□□□ -0.47
HCCAT5-201ENST00000569990 RTL9Q8NET4 1388 aa12.13□□□□□ -0.47
HCCAT5-201ENST00000569990 UTYO14607 1347 aa12.12□□□□□ -0.47
HCCAT5-201ENST00000569990 LMNB1P20700 586 aa12.12□□□□□ -0.47
HCCAT5-201ENST00000569990 FKBP4Q02790 459 aaKnown RBP eCLIP12.12□□□□□ -0.47
HCCAT5-201ENST00000569990 TMC4Q7Z404 712 aa12.12□□□□□ -0.47
HCCAT5-201ENST00000569990 SP8Q8IXZ3 490 aa12.12□□□□□ -0.47
HCCAT5-201ENST00000569990 CCDC85AQ96PX6 553 aaPredicted RBP12.12□□□□□ -0.47
HCCAT5-201ENST00000569990 RNF181Q9P0P0 153 aa12.12□□□□□ -0.47
HCCAT5-201ENST00000569990 TAF1P21675 1872 aa12.12□□□□□ -0.47
HCCAT5-201ENST00000569990 SBF1O95248 1867 aa12.11□□□□□ -0.47
HCCAT5-201ENST00000569990 IPO8O15397 1037 aaKnown RBP12.11□□□□□ -0.47
HCCAT5-201ENST00000569990 CSF1RP07333 972 aa12.11□□□□□ -0.47
HCCAT5-201ENST00000569990 NBPF7P0C2Y1 421 aaPredicted RBP12.11□□□□□ -0.47
HCCAT5-201ENST00000569990 CCT4P50991 539 aaKnown RBP12.11□□□□□ -0.47
HCCAT5-201ENST00000569990 RPS8P62241 208 aaKnown RBP12.11□□□□□ -0.47
HCCAT5-201ENST00000569990 FOXO4P98177 505 aa12.11□□□□□ -0.47
HCCAT5-201ENST00000569990 GRIPAP1Q4V328 841 aa12.11□□□□□ -0.47
HCCAT5-201ENST00000569990 FRAT1Q92837 279 aaPredicted RBP12.11□□□□□ -0.47
HCCAT5-201ENST00000569990 GREM2Q9H772 168 aa12.11□□□□□ -0.47
HCCAT5-201ENST00000569990 FARP1Q9Y4F1 1045 aaPredicted RBP12.11□□□□□ -0.47
HCCAT5-201ENST00000569990 LRRC37AA6NMS7 1700 aa12.11□□□□□ -0.47
HCCAT5-201ENST00000569990 MYH3P11055 1940 aa12.1□□□□□ -0.47
HCCAT5-201ENST00000569990 TRIM27P14373 513 aa12.1□□□□□ -0.47
HCCAT5-201ENST00000569990 EPHA10Q5JZY3 1008 aa12.1□□□□□ -0.47
HCCAT5-201ENST00000569990 ATF7IPQ6VMQ6 1270 aa12.1□□□□□ -0.47
HCCAT5-201ENST00000569990 ZNF784Q8NCA9 323 aaPredicted RBP12.1□□□□□ -0.47
HCCAT5-201ENST00000569990 KAZALD1Q96I82 304 aa12.1□□□□□ -0.47
HCCAT5-201ENST00000569990 PSMD1Q99460 953 aa12.1□□□□□ -0.47
HCCAT5-201ENST00000569990 USP44Q9H0E7 712 aa12.1□□□□□ -0.47
HCCAT5-201ENST00000569990 TMX4Q9H1E5 349 aaPredicted RBP12.1□□□□□ -0.47
HCCAT5-201ENST00000569990 TNNQ9UQP3 1299 aa12.1□□□□□ -0.47
HCCAT5-201ENST00000569990 FAM161AQ3B820 660 aa12.09□□□□□ -0.47
HCCAT5-201ENST00000569990 ZKSCAN2Q63HK3 967 aa12.09□□□□□ -0.47
HCCAT5-201ENST00000569990 INTS3Q68E01 1043 aaKnown RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms