RNA–Protein interactions for RNA: ENST00000569945.1

GCOM1-213, Transcript of GRINL1A complex locus 1, humanhuman

Gene GCOM1, Length 2,335 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCOM1-213ENST00000569945 ST18O60284 1047 aa16.81■□□□□ 0.28
GCOM1-213ENST00000569945 FAM193AP78312 1265 aa16.81■□□□□ 0.28
GCOM1-213ENST00000569945 TJP1Q07157 1748 aa16.81■□□□□ 0.28
GCOM1-213ENST00000569945 CHMP4AQ9BY43 222 aa16.8■□□□□ 0.28
GCOM1-213ENST00000569945 CHPF2Q9P2E5 772 aa16.8■□□□□ 0.28
GCOM1-213ENST00000569945 SMIM5Q71RC9 77 aa16.8■□□□□ 0.28
GCOM1-213ENST00000569945 G2E3Q7L622 706 aa16.8■□□□□ 0.28
GCOM1-213ENST00000569945 KRT222Q8N1A0 295 aa16.8■□□□□ 0.28
GCOM1-213ENST00000569945 LINC00116Q8NCU8 138 aa16.8■□□□□ 0.28
GCOM1-213ENST00000569945 CCNL1Q9UK58 526 aaPredicted RBP16.8■□□□□ 0.28
GCOM1-213ENST00000569945 TPM3P06753 285 aa16.79■□□□□ 0.28
GCOM1-213ENST00000569945 PDIA6Q15084 440 aa16.79■□□□□ 0.28
GCOM1-213ENST00000569945 DEFB132Q7Z7B7 95 aa16.79■□□□□ 0.28
GCOM1-213ENST00000569945 TSPYL1Q9H0U9 437 aa16.79■□□□□ 0.28
GCOM1-213ENST00000569945 LY75O60449 1722 aa16.79■□□□□ 0.28
GCOM1-213ENST00000569945 NBPF26B4DH59 902 aa16.79■□□□□ 0.28
GCOM1-213ENST00000569945 GADD45BO75293 160 aaPredicted RBP16.79■□□□□ 0.28
GCOM1-213ENST00000569945 CYP19A1P11511 503 aaPredicted RBP16.79■□□□□ 0.28
GCOM1-213ENST00000569945 EN1Q05925 392 aaPredicted RBP16.79■□□□□ 0.28
GCOM1-213ENST00000569945 NBPF14Q5TI25 921 aa16.79■□□□□ 0.28
GCOM1-213ENST00000569945 FOXD4L5Q5VV16 416 aaPredicted RBP16.79■□□□□ 0.28
GCOM1-213ENST00000569945 NBPF10Q6P3W6 841 aaKnown RBP16.79■□□□□ 0.28
GCOM1-213ENST00000569945 NBPF15Q8N660 670 aa16.79■□□□□ 0.28
GCOM1-213ENST00000569945 FOXD4L4Q8WXT5 416 aaPredicted RBP16.79■□□□□ 0.28
GCOM1-213ENST00000569945 SMTNL1A8MU46 457 aa16.78■□□□□ 0.28
GCOM1-213ENST00000569945 TRIM6-TRIM34B2RNG4 842 aa16.78■□□□□ 0.28
GCOM1-213ENST00000569945 AP5Z1O43299 807 aa16.78■□□□□ 0.28
GCOM1-213ENST00000569945 MRPL50Q8N5N7 158 aaKnown RBP16.78■□□□□ 0.28
GCOM1-213ENST00000569945 TRIM34Q9BYJ4 488 aa16.78■□□□□ 0.28
GCOM1-213ENST00000569945 SLC4A2P04920 1241 aa16.78■□□□□ 0.28
GCOM1-213ENST00000569945 HOXB7P09629 217 aa16.78■□□□□ 0.28
GCOM1-213ENST00000569945 MYL6BP14649 208 aa16.78■□□□□ 0.28
GCOM1-213ENST00000569945 PHAXQ9H814 394 aaKnown RBP16.78■□□□□ 0.28
GCOM1-213ENST00000569945 HCLS1P14317 486 aaPredicted RBP16.77■□□□□ 0.28
GCOM1-213ENST00000569945 TXNRD1Q16881 649 aa16.77■□□□□ 0.28
GCOM1-213ENST00000569945 CREBRFQ8IUR6 639 aa16.77■□□□□ 0.28
GCOM1-213ENST00000569945 NAA30Q147X3 362 aaPredicted RBP16.76■□□□□ 0.27
GCOM1-213ENST00000569945 EZH2Q15910 746 aaKnown RBP16.76■□□□□ 0.27
GCOM1-213ENST00000569945 CCDC30Q5VVM6 783 aa16.76■□□□□ 0.27
GCOM1-213ENST00000569945 SIRT2Q8IXJ6 389 aa16.76■□□□□ 0.27
GCOM1-213ENST00000569945 MYH14Q7Z406 1995 aaKnown RBP16.76■□□□□ 0.27
GCOM1-213ENST00000569945 ZBTB7BO15156 539 aaPredicted RBP16.76■□□□□ 0.27
GCOM1-213ENST00000569945 IPO8O15397 1037 aaKnown RBP16.76■□□□□ 0.27
GCOM1-213ENST00000569945 FEZ2Q9UHY8 353 aaPredicted RBP16.76■□□□□ 0.27
GCOM1-213ENST00000569945 ZBTB1Q9Y2K1 713 aa16.76■□□□□ 0.27
GCOM1-213ENST00000569945 PLSCR1O15162 318 aa16.75■□□□□ 0.27
GCOM1-213ENST00000569945 INTS5Q6P9B9 1019 aaKnown RBP16.75■□□□□ 0.27
GCOM1-213ENST00000569945 AMIGO3Q86WK7 504 aa16.75■□□□□ 0.27
GCOM1-213ENST00000569945 PLEKHM2Q8IWE5 1019 aa16.75■□□□□ 0.27
GCOM1-213ENST00000569945 LAMB4A4D0S4 1761 aa16.75■□□□□ 0.27
GCOM1-213ENST00000569945 CRKLP46109 303 aaKnown RBP16.75■□□□□ 0.27
GCOM1-213ENST00000569945 CCDC183Q5T5S1 534 aa16.75■□□□□ 0.27
GCOM1-213ENST00000569945 LRP10Q7Z4F1 713 aa16.75■□□□□ 0.27
GCOM1-213ENST00000569945 CERS3Q8IU89 383 aa16.75■□□□□ 0.27
GCOM1-213ENST00000569945 ERICH4A6NGS2 130 aa16.74■□□□□ 0.27
GCOM1-213ENST00000569945 SMARCA5O60264 1052 aaPredicted RBP16.74■□□□□ 0.27
GCOM1-213ENST00000569945 ALDH1L2Q3SY69 923 aa16.74■□□□□ 0.27
GCOM1-213ENST00000569945 CAMKK2Q96RR4 588 aa16.74■□□□□ 0.27
GCOM1-213ENST00000569945 FUCA2Q9BTY2 467 aa16.74■□□□□ 0.27
GCOM1-213ENST00000569945 ZNF330Q9Y3S2 320 aaPredicted RBP16.74■□□□□ 0.27
GCOM1-213ENST00000569945 SOS1Q07889 1333 aaPredicted RBP16.73■□□□□ 0.27
GCOM1-213ENST00000569945 STARD3NLO95772 234 aa16.73■□□□□ 0.27
GCOM1-213ENST00000569945 CUL4AQ13619 759 aa16.73■□□□□ 0.27
GCOM1-213ENST00000569945 TTC22Q5TAA0 569 aa16.73■□□□□ 0.27
GCOM1-213ENST00000569945 USP48Q86UV5 1035 aa16.73■□□□□ 0.27
GCOM1-213ENST00000569945 TMEM87AQ8NBN3 555 aa16.73■□□□□ 0.27
GCOM1-213ENST00000569945 TMX3Q96JJ7 454 aa16.73■□□□□ 0.27
GCOM1-213ENST00000569945 STK31Q9BXU1 1019 aa16.73■□□□□ 0.27
GCOM1-213ENST00000569945 COL5A3P25940 1745 aaPredicted RBP16.73■□□□□ 0.27
GCOM1-213ENST00000569945 AIMP1Q12904 312 aaKnown RBP16.73■□□□□ 0.27
GCOM1-213ENST00000569945 KMT5BQ4FZB7 885 aa16.73■□□□□ 0.27
GCOM1-213ENST00000569945 INTS3Q68E01 1043 aaKnown RBP16.73■□□□□ 0.27
GCOM1-213ENST00000569945 UPF1Q92900 1129 aaKnown RBP eCLIP16.73■□□□□ 0.27
GCOM1-213ENST00000569945 SECISBP2LQ93073 1101 aaKnown RBP16.73■□□□□ 0.27
GCOM1-213ENST00000569945 TEX13AQ9BXU3 409 aaPredicted RBP16.73■□□□□ 0.27
GCOM1-213ENST00000569945 DDX21Q9NR30 783 aaKnown RBP eCLIP16.73■□□□□ 0.27
GCOM1-213ENST00000569945 DBF4Q9UBU7 674 aaPredicted RBP16.73■□□□□ 0.27
GCOM1-213ENST00000569945 TAF1LQ8IZX4 1826 aa16.72■□□□□ 0.27
GCOM1-213ENST00000569945 MX1P20591 662 aa16.72■□□□□ 0.27
GCOM1-213ENST00000569945 CYP2C19P33261 490 aa16.72■□□□□ 0.27
GCOM1-213ENST00000569945 KLHL34Q8N239 644 aa16.72■□□□□ 0.27
GCOM1-213ENST00000569945 ZNF397Q8NF99 534 aaPredicted RBP16.72■□□□□ 0.27
GCOM1-213ENST00000569945 ZNF428Q96B54 188 aa16.71■□□□□ 0.27
GCOM1-213ENST00000569945 YY1AP1Q9H869 796 aa16.71■□□□□ 0.27
GCOM1-213ENST00000569945 GDPD2Q9HCC8 539 aa16.71■□□□□ 0.27
GCOM1-213ENST00000569945 CCDC87Q9NVE4 849 aa16.71■□□□□ 0.27
GCOM1-213ENST00000569945 SF3B2Q13435 895 aaKnown RBP16.71■□□□□ 0.27
GCOM1-213ENST00000569945 ZNF831Q5JPB2 1677 aa16.71■□□□□ 0.26
GCOM1-213ENST00000569945 TCHHQ07283 1943 aa16.7■□□□□ 0.26
GCOM1-213ENST00000569945 HNRNPH2P55795 449 aaKnown RBP16.7■□□□□ 0.26
GCOM1-213ENST00000569945 TTLL7Q6ZT98 887 aa16.7■□□□□ 0.26
GCOM1-213ENST00000569945 XAGE3Q8WTP9 111 aa16.7■□□□□ 0.26
GCOM1-213ENST00000569945 KIF1BPQ96EK5 621 aa16.7■□□□□ 0.26
GCOM1-213ENST00000569945 C1orf115Q9H7X2 142 aa16.7■□□□□ 0.26
GCOM1-213ENST00000569945 PAXBP1Q9Y5B6 917 aa16.7■□□□□ 0.26
GCOM1-213ENST00000569945 CICQ96RK0 1608 aaPredicted RBP16.7■□□□□ 0.26
GCOM1-213ENST00000569945 BRPF1P55201 1214 aaPredicted RBP16.7■□□□□ 0.26
GCOM1-213ENST00000569945 FLIIQ13045 1269 aa16.7■□□□□ 0.26
GCOM1-213ENST00000569945 SLC27A3Q5K4L6 730 aa16.7■□□□□ 0.26
GCOM1-213ENST00000569945 COPS6Q7L5N1 327 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms