RNA–Protein interactions for RNA: ENST00000569380.5

SPSB3-211, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 1,781 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-211ENST00000569380 SLC16A10Q8TF71 515 aa25.41■■□□□ 1.66
SPSB3-211ENST00000569380 POLRMTO00411 1230 aaKnown RBP25.4■■□□□ 1.66
SPSB3-211ENST00000569380 PDE8AO60658 829 aa25.4■■□□□ 1.66
SPSB3-211ENST00000569380 RFX5P48382 616 aaPredicted RBP25.4■■□□□ 1.66
SPSB3-211ENST00000569380 CTSWP56202 376 aa25.4■■□□□ 1.66
SPSB3-211ENST00000569380 FAM161AQ3B820 660 aa25.4■■□□□ 1.66
SPSB3-211ENST00000569380 SERPINB2P05120 415 aa25.39■■□□□ 1.66
SPSB3-211ENST00000569380 GTF2E1P29083 439 aaPredicted RBP25.39■■□□□ 1.66
SPSB3-211ENST00000569380 TTLL11Q8NHH1 800 aa25.39■■□□□ 1.66
SPSB3-211ENST00000569380 FHDC1Q9C0D6 1143 aaPredicted RBP25.39■■□□□ 1.66
SPSB3-211ENST00000569380 BCL11AQ9H165 835 aa25.39■■□□□ 1.66
SPSB3-211ENST00000569380 PDZRN3Q9UPQ7 1066 aa25.39■■□□□ 1.66
SPSB3-211ENST00000569380 TNRC6CQ9HCJ0 1690 aaKnown RBP25.39■■□□□ 1.66
SPSB3-211ENST00000569380 ZNF594Q96JF6 807 aaPredicted RBP25.39■■□□□ 1.65
SPSB3-211ENST00000569380 CSF1RP07333 972 aa25.38■■□□□ 1.65
SPSB3-211ENST00000569380 PRR5LQ6MZQ0 368 aa25.38■■□□□ 1.65
SPSB3-211ENST00000569380 GREM2Q9H772 168 aa25.38■■□□□ 1.65
SPSB3-211ENST00000569380 SURF6O75683 361 aaKnown RBP25.37■■□□□ 1.65
SPSB3-211ENST00000569380 MMP10P09238 476 aa25.37■■□□□ 1.65
SPSB3-211ENST00000569380 TPTE2Q6XPS3 522 aa25.37■■□□□ 1.65
SPSB3-211ENST00000569380 NLGN1Q8N2Q7 840 aa25.37■■□□□ 1.65
SPSB3-211ENST00000569380 NYXQ9GZU5 481 aa25.37■■□□□ 1.65
SPSB3-211ENST00000569380 SIL1Q9H173 461 aa25.37■■□□□ 1.65
SPSB3-211ENST00000569380 COL4A1P02462 1669 aa25.37■■□□□ 1.65
SPSB3-211ENST00000569380 SMARCA5O60264 1052 aaPredicted RBP25.36■■□□□ 1.65
SPSB3-211ENST00000569380 NPHP1O15259 732 aa25.36■■□□□ 1.65
SPSB3-211ENST00000569380 CNBD1Q8NA66 436 aa25.36■■□□□ 1.65
SPSB3-211ENST00000569380 PTPN12Q05209 780 aaKnown RBP25.35■■□□□ 1.65
SPSB3-211ENST00000569380 ANKRD45Q5TZF3 282 aa25.35■■□□□ 1.65
SPSB3-211ENST00000569380 GCC1Q96CN9 775 aa25.35■■□□□ 1.65
SPSB3-211ENST00000569380 TAF1P21675 1872 aa25.35■■□□□ 1.65
SPSB3-211ENST00000569380 SLC10A5Q5PT55 438 aa25.33■■□□□ 1.65
SPSB3-211ENST00000569380 SYT17Q9BSW7 474 aa25.33■■□□□ 1.65
SPSB3-211ENST00000569380 SEC31BQ9NQW1 1179 aa25.33■■□□□ 1.65
SPSB3-211ENST00000569380 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP25.33■■□□□ 1.65
SPSB3-211ENST00000569380 LNPKQ9C0E8 428 aa25.33■■□□□ 1.65
SPSB3-211ENST00000569380 ITGA6P23229 1130 aa25.32■■□□□ 1.64
SPSB3-211ENST00000569380 POLD1P28340 1107 aa25.32■■□□□ 1.64
SPSB3-211ENST00000569380 NUCB1Q02818 461 aa25.32■■□□□ 1.64
SPSB3-211ENST00000569380 NRXN2Q9P2S2 1712 aa25.32■■□□□ 1.64
SPSB3-211ENST00000569380 PDE4AP27815 886 aa25.31■■□□□ 1.64
SPSB3-211ENST00000569380 PUS3Q9BZE2 481 aaKnown RBP25.31■■□□□ 1.64
SPSB3-211ENST00000569380 NOP58Q9Y2X3 529 aaKnown RBP25.31■■□□□ 1.64
SPSB3-211ENST00000569380 CCDC57Q2TAC2 916 aa25.3■■□□□ 1.64
SPSB3-211ENST00000569380 COPRSQ9NQ92 184 aa25.3■■□□□ 1.64
SPSB3-211ENST00000569380 SPEF2Q9C093 1822 aa25.3■■□□□ 1.64
SPSB3-211ENST00000569380 ANKRD31Q8N7Z5 1873 aa25.3■■□□□ 1.64
SPSB3-211ENST00000569380 IFIT5Q13325 482 aaKnown RBP25.29■■□□□ 1.64
SPSB3-211ENST00000569380 LRRC24Q50LG9 513 aa25.29■■□□□ 1.64
SPSB3-211ENST00000569380 CHD1LQ86WJ1 897 aa25.29■■□□□ 1.64
SPSB3-211ENST00000569380 C16orf71Q8IYS4 520 aaPredicted RBP25.29■■□□□ 1.64
SPSB3-211ENST00000569380 KLHL34Q8N239 644 aa25.29■■□□□ 1.64
SPSB3-211ENST00000569380 PARP3Q9Y6F1 533 aa25.29■■□□□ 1.64
SPSB3-211ENST00000569380 RGS3P49796 1198 aa25.28■■□□□ 1.64
SPSB3-211ENST00000569380 OS9Q13438 667 aaPredicted RBP25.28■■□□□ 1.64
SPSB3-211ENST00000569380 IL1RAPL2Q9NP60 686 aa25.28■■□□□ 1.64
SPSB3-211ENST00000569380 SASH1O94885 1247 aa25.28■■□□□ 1.64
SPSB3-211ENST00000569380 ANKRD18BA2A2Z9 1011 aa25.27■■□□□ 1.64
SPSB3-211ENST00000569380 ST5P78524 1137 aa25.27■■□□□ 1.64
SPSB3-211ENST00000569380 SF3B3Q15393 1217 aaKnown RBP25.27■■□□□ 1.64
SPSB3-211ENST00000569380 CCDC152Q4G0S7 254 aa25.27■■□□□ 1.64
SPSB3-211ENST00000569380 OTUD7AQ8TE49 926 aaPredicted RBP25.27■■□□□ 1.64
SPSB3-211ENST00000569380 NLRP3Q96P20 1036 aa25.27■■□□□ 1.64
SPSB3-211ENST00000569380 UTRNP46939 3433 aa25.27■■□□□ 1.64
SPSB3-211ENST00000569380 ATG9AQ7Z3C6 839 aa25.26■■□□□ 1.63
SPSB3-211ENST00000569380 RHPN1Q8TCX5 695 aa25.26■■□□□ 1.63
SPSB3-211ENST00000569380 G3BP1Q13283 466 aaKnown RBP eCLIP25.26■■□□□ 1.63
SPSB3-211ENST00000569380 TAF7LQ5H9L4 462 aa25.25■■□□□ 1.63
SPSB3-211ENST00000569380 SLC51AQ86UW1 340 aa25.25■■□□□ 1.63
SPSB3-211ENST00000569380 LRRCC1Q9C099 1032 aa25.25■■□□□ 1.63
SPSB3-211ENST00000569380 HSP90B1P14625 803 aaKnown RBP25.24■■□□□ 1.63
SPSB3-211ENST00000569380 RAB11FIP3O75154 756 aa25.23■■□□□ 1.63
SPSB3-211ENST00000569380 EYA2O00167 538 aa25.23■■□□□ 1.63
SPSB3-211ENST00000569380 CELF1Q92879 486 aaKnown RBP25.23■■□□□ 1.63
SPSB3-211ENST00000569380 RTL9Q8NET4 1388 aa25.22■■□□□ 1.63
SPSB3-211ENST00000569380 TFCP2Q12800 502 aa25.22■■□□□ 1.63
SPSB3-211ENST00000569380 NLGN2Q8NFZ4 835 aa25.22■■□□□ 1.63
SPSB3-211ENST00000569380 GOLGB1Q14789 3259 aaKnown RBP25.22■■□□□ 1.63
SPSB3-211ENST00000569380 RIC1Q4ADV7 1423 aa25.21■■□□□ 1.63
SPSB3-211ENST00000569380 KIF1BPQ96EK5 621 aa25.21■■□□□ 1.63
SPSB3-211ENST00000569380 HSP90AB4PQ58FF6 505 aa25.21■■□□□ 1.63
SPSB3-211ENST00000569380 LDHAL6AQ6ZMR3 332 aa25.21■■□□□ 1.63
SPSB3-211ENST00000569380 COL11A2P13942 1736 aaPredicted RBP25.2■■□□□ 1.63
SPSB3-211ENST00000569380 RIPOR2Q9Y4F9 1068 aa25.19■■□□□ 1.62
SPSB3-211ENST00000569380 CRY2Q49AN0 593 aa25.18■■□□□ 1.62
SPSB3-211ENST00000569380 CIAO1O76071 339 aa25.18■■□□□ 1.62
SPSB3-211ENST00000569380 TSHZ3Q63HK5 1081 aa25.18■■□□□ 1.62
SPSB3-211ENST00000569380 ERC1Q8IUD2 1116 aa25.18■■□□□ 1.62
SPSB3-211ENST00000569380 HELBQ8NG08 1087 aaPredicted RBP25.18■■□□□ 1.62
SPSB3-211ENST00000569380 BRIP1Q9BX63 1249 aa25.18■■□□□ 1.62
SPSB3-211ENST00000569380 CNNM1Q9NRU3 951 aa25.18■■□□□ 1.62
SPSB3-211ENST00000569380 ZBTB47Q9UFB7 747 aaPredicted RBP25.18■■□□□ 1.62
SPSB3-211ENST00000569380 IL15P40933 162 aaPredicted RBP25.17■■□□□ 1.62
SPSB3-211ENST00000569380 DDX46Q7L014 1031 aaKnown RBP25.16■■□□□ 1.62
SPSB3-211ENST00000569380 EAF2Q96CJ1 260 aaPredicted RBP25.16■■□□□ 1.62
SPSB3-211ENST00000569380 CDC5LQ99459 802 aaKnown RBP25.16■■□□□ 1.62
SPSB3-211ENST00000569380 TLR7Q9NYK1 1049 aaKnown RBP25.16■■□□□ 1.62
SPSB3-211ENST00000569380 KLRG2A4D1S0 409 aaPredicted RBP25.16■■□□□ 1.62
SPSB3-211ENST00000569380 IGHMBP2P38935 993 aaKnown RBP25.16■■□□□ 1.62
SPSB3-211ENST00000569380 ANKRD18AQ8IVF6 992 aa25.16■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms