RNA–Protein interactions for RNA: ENST00000569363.1

SPG7-220, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-220ENST00000569363 FAM227BQ96M60 508 aa9.51□□□□□ -0.89
SPG7-220ENST00000569363 FMNL2Q96PY5 1086 aa9.51□□□□□ -0.89
SPG7-220ENST00000569363 ORAI2Q96SN7 254 aa9.51□□□□□ -0.89
SPG7-220ENST00000569363 MYD88Q99836 296 aa9.51□□□□□ -0.89
SPG7-220ENST00000569363 FUCA2Q9BTY2 467 aa9.51□□□□□ -0.89
SPG7-220ENST00000569363 DDX19AQ9NUU7 478 aaKnown RBP9.51□□□□□ -0.89
SPG7-220ENST00000569363 USP25Q9UHP3 1055 aa9.51□□□□□ -0.89
SPG7-220ENST00000569363 TPCN1Q9ULQ1 816 aa9.51□□□□□ -0.89
SPG7-220ENST00000569363 KIF3AQ9Y496 699 aa9.51□□□□□ -0.89
SPG7-220ENST00000569363 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.51□□□□□ -0.89
SPG7-220ENST00000569363 GOLGA6L4A6NEF3 574 aa9.5□□□□□ -0.89
SPG7-220ENST00000569363 TAF5LO75529 589 aa9.5□□□□□ -0.89
SPG7-220ENST00000569363 CAVIN2O95810 425 aa9.5□□□□□ -0.89
SPG7-220ENST00000569363 HMGB1P09429 215 aaKnown RBP9.5□□□□□ -0.89
SPG7-220ENST00000569363 PRKCSHP14314 528 aaPredicted RBP9.5□□□□□ -0.89
SPG7-220ENST00000569363 HCLS1P14317 486 aaPredicted RBP9.5□□□□□ -0.89
SPG7-220ENST00000569363 CPA1P15085 419 aa9.5□□□□□ -0.89
SPG7-220ENST00000569363 MAP3K11Q16584 847 aa9.5□□□□□ -0.89
SPG7-220ENST00000569363 RABL6Q3YEC7 729 aaPredicted RBP9.5□□□□□ -0.89
SPG7-220ENST00000569363 TNNI3KQ59H18 835 aa9.5□□□□□ -0.89
SPG7-220ENST00000569363 COPS6Q7L5N1 327 aa9.5□□□□□ -0.89
SPG7-220ENST00000569363 DCAF5Q96JK2 942 aa9.5□□□□□ -0.89
SPG7-220ENST00000569363 NUP62CLQ9H1M0 184 aa9.5□□□□□ -0.89
SPG7-220ENST00000569363 BOLA2Q9H3K6 86 aa9.5□□□□□ -0.89
SPG7-220ENST00000569363 ZNF219Q9P2Y4 722 aaPredicted RBP9.5□□□□□ -0.89
SPG7-220ENST00000569363 FPGT-TNNI3KV9GXZ4 949 aa9.5□□□□□ -0.89
SPG7-220ENST00000569363 C1orf167Q5SNV9 1468 aa9.5□□□□□ -0.89
SPG7-220ENST00000569363 KDM6AO15550 1401 aaPredicted RBP9.49□□□□□ -0.89
SPG7-220ENST00000569363 ALS2Q96Q42 1657 aa9.49□□□□□ -0.89
SPG7-220ENST00000569363 UQCRHLA0A096LP55 91 aa9.49□□□□□ -0.89
SPG7-220ENST00000569363 A0A0D9SFI3 127 aa9.49□□□□□ -0.89
SPG7-220ENST00000569363 PRAMEF22A3QJZ6 481 aa9.49□□□□□ -0.89
SPG7-220ENST00000569363 UQCRHP07919 91 aa9.49□□□□□ -0.89
SPG7-220ENST00000569363 RFX5P48382 616 aaPredicted RBP9.49□□□□□ -0.89
SPG7-220ENST00000569363 ST3GAL1Q11201 340 aa9.49□□□□□ -0.89
SPG7-220ENST00000569363 PROSER2Q86WR7 435 aaPredicted RBP9.49□□□□□ -0.89
SPG7-220ENST00000569363 NECAB1Q8N987 351 aa9.49□□□□□ -0.89
SPG7-220ENST00000569363 NEK1Q96PY6 1258 aa9.49□□□□□ -0.89
SPG7-220ENST00000569363 HAUS7Q99871 368 aa9.49□□□□□ -0.89
SPG7-220ENST00000569363 LARP6Q9BRS8 491 aaKnown RBP9.49□□□□□ -0.89
SPG7-220ENST00000569363 LLPHQ9BRT6 129 aaKnown RBP9.49□□□□□ -0.89
SPG7-220ENST00000569363 SIL1Q9H173 461 aa9.49□□□□□ -0.89
SPG7-220ENST00000569363 ZSCAN16Q9H4T2 348 aaPredicted RBP9.49□□□□□ -0.89
SPG7-220ENST00000569363 C19orf44Q9H6X5 657 aa9.49□□□□□ -0.89
SPG7-220ENST00000569363 GPR108Q9NPR9 543 aa9.49□□□□□ -0.89
SPG7-220ENST00000569363 NLRP2Q9NX02 1062 aa9.49□□□□□ -0.89
SPG7-220ENST00000569363 ZNF335Q9H4Z2 1342 aaPredicted RBP9.49□□□□□ -0.89
SPG7-220ENST00000569363 C5P01031 1676 aa9.48□□□□□ -0.89
SPG7-220ENST00000569363 MYL6BP14649 208 aa9.48□□□□□ -0.89
SPG7-220ENST00000569363 LRRFIP1Q32MZ4 808 aaKnown RBP9.48□□□□□ -0.89
SPG7-220ENST00000569363 MCMDC2Q4G0Z9 681 aa9.48□□□□□ -0.89
SPG7-220ENST00000569363 ATL3Q6DD88 541 aa9.48□□□□□ -0.89
SPG7-220ENST00000569363 GIMAP6Q6P9H5 292 aa9.48□□□□□ -0.89
SPG7-220ENST00000569363 PLBD2Q8NHP8 589 aa9.48□□□□□ -0.89
SPG7-220ENST00000569363 FAM200AQ8TCP9 573 aa9.48□□□□□ -0.89
SPG7-220ENST00000569363 SPATA32Q96LK8 384 aa9.48□□□□□ -0.89
SPG7-220ENST00000569363 HELLSQ9NRZ9 838 aa9.48□□□□□ -0.89
SPG7-220ENST00000569363 SPTLC3Q9NUV7 552 aa9.48□□□□□ -0.89
SPG7-220ENST00000569363 TLR7Q9NYK1 1049 aaKnown RBP9.48□□□□□ -0.89
SPG7-220ENST00000569363 CFAP45Q9UL16 551 aa9.48□□□□□ -0.89
SPG7-220ENST00000569363 AXIN2Q9Y2T1 843 aa9.48□□□□□ -0.89
SPG7-220ENST00000569363 SH3TC1Q8TE82 1336 aa9.48□□□□□ -0.89
SPG7-220ENST00000569363 DCCP43146 1447 aa9.48□□□□□ -0.89
SPG7-220ENST00000569363 PTPN12Q05209 780 aaKnown RBP9.47□□□□□ -0.89
SPG7-220ENST00000569363 TFCP2Q12800 502 aa9.47□□□□□ -0.89
SPG7-220ENST00000569363 TOB2Q14106 344 aaPredicted RBP9.47□□□□□ -0.89
SPG7-220ENST00000569363 NOLC1Q14978 699 aaKnown RBP eCLIP9.47□□□□□ -0.89
SPG7-220ENST00000569363 DNTTIP2Q5QJE6 756 aaKnown RBP9.47□□□□□ -0.89
SPG7-220ENST00000569363 RBM43Q6ZSC3 357 aaKnown RBP9.47□□□□□ -0.89
SPG7-220ENST00000569363 TTC6Q86TZ1 520 aa9.47□□□□□ -0.89
SPG7-220ENST00000569363 NFATC2IPQ8NCF5 419 aa9.47□□□□□ -0.89
SPG7-220ENST00000569363 GTF3C6Q969F1 213 aa9.47□□□□□ -0.89
SPG7-220ENST00000569363 TNMDQ9H2S6 317 aa9.47□□□□□ -0.89
SPG7-220ENST00000569363 CLSTN2Q9H4D0 955 aa9.47□□□□□ -0.89
SPG7-220ENST00000569363 DBNLQ9UJU6 430 aaKnown RBP9.47□□□□□ -0.89
SPG7-220ENST00000569363 PARP4Q9UKK3 1724 aaKnown RBP9.47□□□□□ -0.89
SPG7-220ENST00000569363 TMEM94Q12767 1356 aa9.47□□□□□ -0.89
SPG7-220ENST00000569363 PALLDQ8WX93 1383 aa9.47□□□□□ -0.89
SPG7-220ENST00000569363 LAMB4A4D0S4 1761 aa9.47□□□□□ -0.89
SPG7-220ENST00000569363 PKD1L3Q7Z443 1732 aa9.46□□□□□ -0.89
SPG7-220ENST00000569363 H3BQV1 296 aa9.46□□□□□ -0.9
SPG7-220ENST00000569363 CTAGE5O15320 804 aa9.46□□□□□ -0.9
SPG7-220ENST00000569363 CSB-PGBD3P0DP91 1061 aa9.46□□□□□ -0.9
SPG7-220ENST00000569363 CABP4P57796 275 aa9.46□□□□□ -0.9
SPG7-220ENST00000569363 SLC39A6Q13433 755 aa9.46□□□□□ -0.9
SPG7-220ENST00000569363 EPHA10Q5JZY3 1008 aa9.46□□□□□ -0.9
SPG7-220ENST00000569363 IFFO2Q5TF58 517 aa9.46□□□□□ -0.9
SPG7-220ENST00000569363 NAA16Q6N069 864 aaPredicted RBP9.46□□□□□ -0.9
SPG7-220ENST00000569363 CDC37L1Q7L3B6 337 aa9.46□□□□□ -0.9
SPG7-220ENST00000569363 LRP10Q7Z4F1 713 aa9.46□□□□□ -0.9
SPG7-220ENST00000569363 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.46□□□□□ -0.9
SPG7-220ENST00000569363 KBTBD3Q8NAB2 608 aa9.46□□□□□ -0.9
SPG7-220ENST00000569363 MYRIPQ8NFW9 859 aa9.46□□□□□ -0.9
SPG7-220ENST00000569363 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.46□□□□□ -0.9
SPG7-220ENST00000569363 LEO1Q8WVC0 666 aaPredicted RBP9.46□□□□□ -0.9
SPG7-220ENST00000569363 RBM33Q96EV2 1170 aaKnown RBP9.46□□□□□ -0.9
SPG7-220ENST00000569363 ZNF496Q96IT1 587 aaPredicted RBP9.46□□□□□ -0.9
SPG7-220ENST00000569363 DSCC1Q9BVC3 393 aa9.46□□□□□ -0.9
SPG7-220ENST00000569363 A0A087WZG4 1122 aa9.45□□□□□ -0.9
SPG7-220ENST00000569363 H7C1W4 665 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms