RNA–Protein interactions for RNA: ENST00000569243.5

UBR1-209, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-209	ENST00000569243	SEMA3F	Q13275	785 aa		7.94	□□□□□ -1.14
UBR1-209	ENST00000569243	HFE2	Q6ZVN8	426 aa		7.93	□□□□□ -1.14
UBR1-209	ENST00000569243	DHX32	Q7L7V1	743 aa	Known RBP	7.93	□□□□□ -1.14
UBR1-209	ENST00000569243	KRT25	Q7Z3Z0	450 aa		7.93	□□□□□ -1.14
UBR1-209	ENST00000569243	TRIM42	Q8IWZ5	723 aa		7.93	□□□□□ -1.14
UBR1-209	ENST00000569243	ARMC10	Q8N2F6	343 aa		7.93	□□□□□ -1.14
UBR1-209	ENST00000569243	TRPM4	Q8TD43	1214 aa		7.93	□□□□□ -1.14
UBR1-209	ENST00000569243	C7orf69	Q9H7B7	122 aa		7.93	□□□□□ -1.14
UBR1-209	ENST00000569243	HMX2	A2RU54	273 aa		7.92	□□□□□ -1.14
UBR1-209	ENST00000569243	WWC1	Q8IX03	1113 aa		7.92	□□□□□ -1.14
UBR1-209	ENST00000569243	NFATC2IP	Q8NCF5	419 aa		7.92	□□□□□ -1.14
UBR1-209	ENST00000569243	MAP3K6	O95382	1288 aa		7.91	□□□□□ -1.14
UBR1-209	ENST00000569243	RNF43	Q68DV7	783 aa		7.91	□□□□□ -1.14
UBR1-209	ENST00000569243	POTEA	Q6S8J7	498 aa		7.91	□□□□□ -1.14
UBR1-209	ENST00000569243	ALDH16A1	Q8IZ83	802 aa		7.91	□□□□□ -1.14
UBR1-209	ENST00000569243	DBNDD2	Q9BQY9	259 aa		7.91	□□□□□ -1.14
UBR1-209	ENST00000569243	ZFAT	Q9P243	1243 aa		7.91	□□□□□ -1.14
UBR1-209	ENST00000569243	COG6	Q9Y2V7	657 aa		7.91	□□□□□ -1.14
UBR1-209	ENST00000569243	PRKCSH	P14314	528 aa	Predicted RBP	7.9	□□□□□ -1.14
UBR1-209	ENST00000569243	GPLD1	P80108	840 aa		7.9	□□□□□ -1.14
UBR1-209	ENST00000569243	FLII	Q13045	1269 aa		7.9	□□□□□ -1.14
UBR1-209	ENST00000569243	ASIC4	Q96FT7	647 aa		7.9	□□□□□ -1.14
UBR1-209	ENST00000569243	SKI	P12755	728 aa		7.89	□□□□□ -1.15
UBR1-209	ENST00000569243	EIF2AK2	P19525	551 aa	Known RBP	7.89	□□□□□ -1.15
UBR1-209	ENST00000569243	SETDB1	Q15047	1291 aa		7.89	□□□□□ -1.15
UBR1-209	ENST00000569243	HIF1A	Q16665	826 aa		7.89	□□□□□ -1.15
UBR1-209	ENST00000569243	GDF6	Q6KF10	455 aa	Predicted RBP	7.89	□□□□□ -1.15
UBR1-209	ENST00000569243	ZC3HAV1	Q7Z2W4	902 aa	Known RBP	7.89	□□□□□ -1.15
UBR1-209	ENST00000569243	IL22RA1	Q8N6P7	574 aa		7.89	□□□□□ -1.15
UBR1-209	ENST00000569243	UTP4	Q969X6	686 aa	Known RBP	7.89	□□□□□ -1.15
UBR1-209	ENST00000569243	ALG2	Q9H553	416 aa		7.89	□□□□□ -1.15
UBR1-209	ENST00000569243	TARS	P26639	723 aa	Known RBP	7.88	□□□□□ -1.15
UBR1-209	ENST00000569243	NCOA4	Q13772	614 aa		7.88	□□□□□ -1.15
UBR1-209	ENST00000569243	FBLN7	Q53RD9	439 aa		7.88	□□□□□ -1.15
UBR1-209	ENST00000569243	SHKBP1	Q8TBC3	707 aa		7.88	□□□□□ -1.15
UBR1-209	ENST00000569243	NGLY1	Q96IV0	654 aa		7.88	□□□□□ -1.15
UBR1-209	ENST00000569243	KRTAP17-1	Q9BYP8	105 aa		7.88	□□□□□ -1.15
UBR1-209	ENST00000569243	PPP1R12B	O60237	982 aa	Predicted RBP	7.87	□□□□□ -1.15
UBR1-209	ENST00000569243	GRN	P28799	593 aa	Known RBP	7.87	□□□□□ -1.15
UBR1-209	ENST00000569243	TPCN2	Q8NHX9	752 aa		7.87	□□□□□ -1.15
UBR1-209	ENST00000569243	CCER1	Q8TC90	406 aa	Predicted RBP	7.87	□□□□□ -1.15
UBR1-209	ENST00000569243	RAD21	O60216	631 aa		7.86	□□□□□ -1.15
UBR1-209	ENST00000569243	HOXA10	P31260	410 aa	Predicted RBP	7.86	□□□□□ -1.15
UBR1-209	ENST00000569243	DCAF11	Q8TEB1	546 aa		7.86	□□□□□ -1.15
UBR1-209	ENST00000569243	PLD4	Q96BZ4	506 aa		7.86	□□□□□ -1.15
UBR1-209	ENST00000569243	IFT43	Q96FT9	208 aa		7.86	□□□□□ -1.15
UBR1-209	ENST00000569243	CEP41	Q9BYV8	373 aa		7.86	□□□□□ -1.15
UBR1-209	ENST00000569243	SRA1	Q9HD15	236 aa	Known RBP	7.86	□□□□□ -1.15
UBR1-209	ENST00000569243	RARA	P10276	462 aa		7.85	□□□□□ -1.15
UBR1-209	ENST00000569243	IER5	Q5VY09	327 aa		7.85	□□□□□ -1.15
UBR1-209	ENST00000569243	MAP4K3	Q8IVH8	894 aa		7.85	□□□□□ -1.15
UBR1-209	ENST00000569243	ANGEL1	Q9UNK9	670 aa	Known RBP	7.85	□□□□□ -1.15
UBR1-209	ENST00000569243	SASH3	O75995	380 aa		7.84	□□□□□ -1.15
UBR1-209	ENST00000569243	WISP1	O95388	367 aa		7.84	□□□□□ -1.15
UBR1-209	ENST00000569243	EPB42	P16452	691 aa		7.84	□□□□□ -1.15
UBR1-209	ENST00000569243	DEPDC4	Q8N2C3	294 aa		7.84	□□□□□ -1.15
UBR1-209	ENST00000569243	DMGDH	Q9UI17	866 aa	Known RBP	7.84	□□□□□ -1.15
UBR1-209	ENST00000569243	KIAA1024	Q9UPX6	916 aa		7.84	□□□□□ -1.15
UBR1-209	ENST00000569243	TGFBR3L	H3BV60	316 aa		7.83	□□□□□ -1.16
UBR1-209	ENST00000569243		J3QW42	95 aa		7.83	□□□□□ -1.16
UBR1-209	ENST00000569243	UVSSA	Q2YD98	709 aa		7.83	□□□□□ -1.16
UBR1-209	ENST00000569243	SPOCD1	Q6ZMY3	1216 aa		7.83	□□□□□ -1.16
UBR1-209	ENST00000569243	ACAD11	Q709F0	780 aa		7.83	□□□□□ -1.16
UBR1-209	ENST00000569243	CBLL1	Q75N03	491 aa		7.83	□□□□□ -1.16
UBR1-209	ENST00000569243	WDR64	B1ANS9	1081 aa		7.82	□□□□□ -1.16
UBR1-209	ENST00000569243	C21orf2	O43822	256 aa		7.82	□□□□□ -1.16
UBR1-209	ENST00000569243	NRL	P54845	237 aa		7.82	□□□□□ -1.16
UBR1-209	ENST00000569243	ZNF648	Q5T619	568 aa	Predicted RBP	7.82	□□□□□ -1.16
UBR1-209	ENST00000569243	CCDC102B	Q68D86	513 aa		7.82	□□□□□ -1.16
UBR1-209	ENST00000569243	FAM46A	Q96IP4	442 aa	Known RBP	7.82	□□□□□ -1.16
UBR1-209	ENST00000569243	MYRFL	Q96LU7	910 aa		7.82	□□□□□ -1.16
UBR1-209	ENST00000569243	BCS1L	Q9Y276	419 aa		7.82	□□□□□ -1.16
UBR1-209	ENST00000569243	ZBTB7B	O15156	539 aa	Predicted RBP	7.81	□□□□□ -1.16
UBR1-209	ENST00000569243	ARID4A	P29374	1257 aa	Predicted RBP	7.81	□□□□□ -1.16
UBR1-209	ENST00000569243	ZNF124	Q15973	351 aa		7.81	□□□□□ -1.16
UBR1-209	ENST00000569243	GALNT11	Q8NCW6	608 aa		7.81	□□□□□ -1.16
UBR1-209	ENST00000569243	FAM83C	Q9BQN1	747 aa		7.81	□□□□□ -1.16
UBR1-209	ENST00000569243	KRTAP9-7	A8MTY7	169 aa		7.8	□□□□□ -1.16
UBR1-209	ENST00000569243	UBTF	P17480	764 aa	Known RBP	7.8	□□□□□ -1.16
UBR1-209	ENST00000569243	ITGB5	P18084	799 aa		7.8	□□□□□ -1.16
UBR1-209	ENST00000569243	INPP5B	P32019	993 aa		7.8	□□□□□ -1.16
UBR1-209	ENST00000569243	CLEC10A	Q8IUN9	316 aa		7.8	□□□□□ -1.16
UBR1-209	ENST00000569243	TSEN2	Q8NCE0	465 aa	Known RBP	7.8	□□□□□ -1.16
UBR1-209	ENST00000569243	KCNF1	Q9H3M0	494 aa		7.8	□□□□□ -1.16
UBR1-209	ENST00000569243	JUNB	P17275	347 aa	Predicted RBP	7.79	□□□□□ -1.16
UBR1-209	ENST00000569243	IDH3A	P50213	366 aa		7.79	□□□□□ -1.16
UBR1-209	ENST00000569243	TRIM50	Q86XT4	487 aa		7.79	□□□□□ -1.16
UBR1-209	ENST00000569243	PLEKHM2	Q8IWE5	1019 aa		7.79	□□□□□ -1.16
UBR1-209	ENST00000569243	CHMP7	Q8WUX9	453 aa	Predicted RBP	7.79	□□□□□ -1.16
UBR1-209	ENST00000569243	POM121	Q96HA1	1249 aa		7.79	□□□□□ -1.16
UBR1-209	ENST00000569243	C2orf49	Q9BVC5	232 aa	Predicted RBP	7.79	□□□□□ -1.16
UBR1-209	ENST00000569243	PIM2	Q9P1W9	311 aa		7.79	□□□□□ -1.16
UBR1-209	ENST00000569243	LOC102724428	A0A0B4J2F2	783 aa		7.78	□□□□□ -1.16
UBR1-209	ENST00000569243	DBX1	A6NMT0	343 aa		7.78	□□□□□ -1.16
UBR1-209	ENST00000569243	USP17L5	A8MUK1	530 aa		7.78	□□□□□ -1.16
UBR1-209	ENST00000569243	SIK1	P57059	783 aa		7.78	□□□□□ -1.16
UBR1-209	ENST00000569243	BEND4	Q6ZU67	534 aa		7.78	□□□□□ -1.16
UBR1-209	ENST00000569243	TP53INP2	Q8IXH6	220 aa		7.78	□□□□□ -1.16
UBR1-209	ENST00000569243	FAM20C	Q8IXL6	584 aa		7.78	□□□□□ -1.16
UBR1-209	ENST00000569243	KCNK4	Q9NYG8	393 aa		7.78	□□□□□ -1.16

Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms