RNA–Protein interactions for RNA: ENST00000568993.5

SNX20-204, Transcript of sorting nexin 20, humanhuman

TSL 1 (best)

Gene SNX20, Length 2,003 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-204ENST00000568993 UBN2Q6ZU65 1347 aa18.85■□□□□ 0.61
SNX20-204ENST00000568993 ST18O60284 1047 aa18.84■□□□□ 0.61
SNX20-204ENST00000568993 CAMTA2O94983 1202 aa18.84■□□□□ 0.61
SNX20-204ENST00000568993 CWC27Q6UX04 472 aaKnown RBP18.84■□□□□ 0.61
SNX20-204ENST00000568993 TTLL11Q8NHH1 800 aa18.84■□□□□ 0.61
SNX20-204ENST00000568993 ZNF594Q96JF6 807 aaPredicted RBP18.84■□□□□ 0.61
SNX20-204ENST00000568993 DBNDD2Q9BQY9 259 aa18.84■□□□□ 0.61
SNX20-204ENST00000568993 TRMT112Q9UI30 125 aaKnown RBP18.84■□□□□ 0.61
SNX20-204ENST00000568993 HSPA1LP34931 641 aa18.84■□□□□ 0.61
SNX20-204ENST00000568993 IRS4O14654 1257 aaPredicted RBP18.83■□□□□ 0.61
SNX20-204ENST00000568993 ONECUT3O60422 494 aaPredicted RBP18.83■□□□□ 0.61
SNX20-204ENST00000568993 IFIT5Q13325 482 aaKnown RBP18.83■□□□□ 0.61
SNX20-204ENST00000568993 TICAM2Q86XR7 235 aa18.83■□□□□ 0.61
SNX20-204ENST00000568993 SYNE4Q8N205 404 aa18.83■□□□□ 0.61
SNX20-204ENST00000568993 SPRYD3Q8NCJ5 442 aa18.83■□□□□ 0.61
SNX20-204ENST00000568993 GJD4Q96KN9 370 aaPredicted RBP18.83■□□□□ 0.61
SNX20-204ENST00000568993 CIZ1Q9ULV3 898 aaPredicted RBP18.83■□□□□ 0.61
SNX20-204ENST00000568993 RFX7Q2KHR2 1363 aa18.83■□□□□ 0.6
SNX20-204ENST00000568993 ZNF609O15014 1411 aa18.83■□□□□ 0.6
SNX20-204ENST00000568993 PDE8AO60658 829 aa18.83■□□□□ 0.6
SNX20-204ENST00000568993 CTSWP56202 376 aa18.83■□□□□ 0.6
SNX20-204ENST00000568993 KIAA1211Q6ZU35 1233 aa18.83■□□□□ 0.6
SNX20-204ENST00000568993 HAUS7Q99871 368 aa18.83■□□□□ 0.6
SNX20-204ENST00000568993 PUS3Q9BZE2 481 aaKnown RBP18.83■□□□□ 0.6
SNX20-204ENST00000568993 PALD1Q9ULE6 856 aa18.83■□□□□ 0.6
SNX20-204ENST00000568993 NHSQ6T4R5 1651 aa18.83■□□□□ 0.6
SNX20-204ENST00000568993 RGL2O15211 777 aa18.82■□□□□ 0.6
SNX20-204ENST00000568993 PARP10Q53GL7 1025 aa18.82■□□□□ 0.6
SNX20-204ENST00000568993 AEBP2Q6ZN18 517 aaPredicted RBP18.82■□□□□ 0.6
SNX20-204ENST00000568993 CEP126Q9P2H0 1117 aa18.82■□□□□ 0.6
SNX20-204ENST00000568993 ATRNO75882 1429 aa18.81■□□□□ 0.6
SNX20-204ENST00000568993 MEX3CQ5U5Q3 659 aaKnown RBP18.81■□□□□ 0.6
SNX20-204ENST00000568993 CNTNAP4Q9C0A0 1308 aa18.81■□□□□ 0.6
SNX20-204ENST00000568993 BTAF1O14981 1849 aa18.8■□□□□ 0.6
SNX20-204ENST00000568993 BCORQ6W2J9 1755 aa18.8■□□□□ 0.6
SNX20-204ENST00000568993 TIMM10P62072 90 aa18.8■□□□□ 0.6
SNX20-204ENST00000568993 LINC00116Q8NCU8 138 aa18.8■□□□□ 0.6
SNX20-204ENST00000568993 FSD1Q9BTV5 496 aa18.8■□□□□ 0.6
SNX20-204ENST00000568993 AKAP2Q9Y2D5 859 aa18.8■□□□□ 0.6
SNX20-204ENST00000568993 AFF2P51816 1311 aa18.8■□□□□ 0.6
SNX20-204ENST00000568993 ITGA6P23229 1130 aa18.79■□□□□ 0.6
SNX20-204ENST00000568993 MCM2P49736 904 aa18.79■□□□□ 0.6
SNX20-204ENST00000568993 CLEC4GQ6UXB4 293 aa18.79■□□□□ 0.6
SNX20-204ENST00000568993 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.79■□□□□ 0.6
SNX20-204ENST00000568993 GREM2Q9H772 168 aa18.79■□□□□ 0.6
SNX20-204ENST00000568993 RIPOR2Q9Y4F9 1068 aa18.79■□□□□ 0.6
SNX20-204ENST00000568993 A0A1B0GUL7 405 aa18.79■□□□□ 0.6
SNX20-204ENST00000568993 ANKRD18BA2A2Z9 1011 aa18.79■□□□□ 0.6
SNX20-204ENST00000568993 NMIQ13287 307 aaPredicted RBP18.79■□□□□ 0.6
SNX20-204ENST00000568993 RC3H1Q5TC82 1133 aaKnown RBP18.79■□□□□ 0.6
SNX20-204ENST00000568993 SUSD4Q5VX71 490 aa18.79■□□□□ 0.6
SNX20-204ENST00000568993 KCNB2Q92953 911 aa18.79■□□□□ 0.6
SNX20-204ENST00000568993 NEUROD6Q96NK8 337 aa18.79■□□□□ 0.6
SNX20-204ENST00000568993 SH3TC1Q8TE82 1336 aa18.79■□□□□ 0.6
SNX20-204ENST00000568993 NEK4P51957 841 aa18.78■□□□□ 0.6
SNX20-204ENST00000568993 TAF7LQ5H9L4 462 aa18.78■□□□□ 0.6
SNX20-204ENST00000568993 UTP14AQ9BVJ6 771 aaKnown RBP18.78■□□□□ 0.6
SNX20-204ENST00000568993 FRAT2O75474 233 aaPredicted RBP18.78■□□□□ 0.6
SNX20-204ENST00000568993 PTF1AQ7RTS3 328 aa18.78■□□□□ 0.6
SNX20-204ENST00000568993 FAM227BQ96M60 508 aa18.78■□□□□ 0.6
SNX20-204ENST00000568993 TRPC5Q9UL62 973 aaPredicted RBP18.78■□□□□ 0.6
SNX20-204ENST00000568993 ZNF652Q9Y2D9 606 aa18.78■□□□□ 0.6
SNX20-204ENST00000568993 SPEF2Q9C093 1822 aa18.77■□□□□ 0.6
SNX20-204ENST00000568993 MED23Q9ULK4 1368 aa18.77■□□□□ 0.6
SNX20-204ENST00000568993 HSP90B1P14625 803 aaKnown RBP18.77■□□□□ 0.6
SNX20-204ENST00000568993 SBF2Q86WG5 1849 aa18.77■□□□□ 0.59
SNX20-204ENST00000568993 CCDC171Q6TFL3 1326 aa18.76■□□□□ 0.59
SNX20-204ENST00000568993 HSP90AA1P07900 732 aaKnown RBP18.76■□□□□ 0.59
SNX20-204ENST00000568993 PTH1RQ03431 593 aa18.76■□□□□ 0.59
SNX20-204ENST00000568993 MAP4K1Q92918 833 aa18.76■□□□□ 0.59
SNX20-204ENST00000568993 CCDC85AQ96PX6 553 aaPredicted RBP18.76■□□□□ 0.59
SNX20-204ENST00000568993 SNX14Q9Y5W7 946 aa18.76■□□□□ 0.59
SNX20-204ENST00000568993 RIC1Q4ADV7 1423 aa18.76■□□□□ 0.59
SNX20-204ENST00000568993 A0A0D9SFI3 127 aa18.76■□□□□ 0.59
SNX20-204ENST00000568993 LDHAL6AQ6ZMR3 332 aa18.76■□□□□ 0.59
SNX20-204ENST00000568993 KBTBD3Q8NAB2 608 aa18.76■□□□□ 0.59
SNX20-204ENST00000568993 EDC3Q96F86 508 aaKnown RBP18.76■□□□□ 0.59
SNX20-204ENST00000568993 PKNOX2Q96KN3 472 aa18.76■□□□□ 0.59
SNX20-204ENST00000568993 LAMB2P55268 1798 aa18.76■□□□□ 0.59
SNX20-204ENST00000568993 LRP5O75197 1615 aa18.75■□□□□ 0.59
SNX20-204ENST00000568993 NTSR2O95665 410 aa18.75■□□□□ 0.59
SNX20-204ENST00000568993 PODXL2Q9NZ53 605 aa18.75■□□□□ 0.59
SNX20-204ENST00000568993 NIP7Q9Y221 180 aaKnown RBP eCLIP18.75■□□□□ 0.59
SNX20-204ENST00000568993 DDX60Q8IY21 1712 aaKnown RBP18.75■□□□□ 0.59
SNX20-204ENST00000568993 NECTIN1Q15223 517 aa18.74■□□□□ 0.59
SNX20-204ENST00000568993 RTL9Q8NET4 1388 aa18.74■□□□□ 0.59
SNX20-204ENST00000568993 LY75O60449 1722 aa18.74■□□□□ 0.59
SNX20-204ENST00000568993 RASEFQ8IZ41 740 aa18.74■□□□□ 0.59
SNX20-204ENST00000568993 VGLL2Q8N8G2 317 aa18.74■□□□□ 0.59
SNX20-204ENST00000568993 DNAJC2Q99543 621 aaKnown RBP18.74■□□□□ 0.59
SNX20-204ENST00000568993 ABCC12Q96J65 1359 aa18.74■□□□□ 0.59
SNX20-204ENST00000568993 XAGE2Q96GT9 111 aa18.73■□□□□ 0.59
SNX20-204ENST00000568993 PAG1Q9NWQ8 432 aa18.73■□□□□ 0.59
SNX20-204ENST00000568993 RPS6KA4O75676 772 aa18.73■□□□□ 0.59
SNX20-204ENST00000568993 CCDC158Q5M9N0 1113 aa18.73■□□□□ 0.59
SNX20-204ENST00000568993 TM6SF1Q9BZW5 370 aa18.73■□□□□ 0.59
SNX20-204ENST00000568993 CWC22Q9HCG8 908 aaKnown RBP18.73■□□□□ 0.59
SNX20-204ENST00000568993 SCN7AQ01118 1682 aa18.72■□□□□ 0.59
SNX20-204ENST00000568993 IFIT1P09914 478 aaKnown RBP18.72■□□□□ 0.59
SNX20-204ENST00000568993 HCLS1P14317 486 aaPredicted RBP18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms