RNA–Protein interactions for RNA: ENST00000568814.1

HERPUD1-216, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 509 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-216ENST00000568814 MTX1Q13505 466 aa12.77□□□□□ -0.37
HERPUD1-216ENST00000568814 SF3B3Q15393 1217 aaKnown RBP12.77□□□□□ -0.37
HERPUD1-216ENST00000568814 RABL6Q3YEC7 729 aaPredicted RBP12.77□□□□□ -0.37
HERPUD1-216ENST00000568814 ERICH6BQ5W0A0 696 aa12.77□□□□□ -0.37
HERPUD1-216ENST00000568814 CD2APQ9Y5K6 639 aa12.77□□□□□ -0.37
HERPUD1-216ENST00000568814 RTL9Q8NET4 1388 aa12.77□□□□□ -0.37
HERPUD1-216ENST00000568814 CSF1RP07333 972 aa12.76□□□□□ -0.37
HERPUD1-216ENST00000568814 CRY2Q49AN0 593 aa12.76□□□□□ -0.37
HERPUD1-216ENST00000568814 LMBR1LQ6UX01 489 aa12.76□□□□□ -0.37
HERPUD1-216ENST00000568814 RPAP2Q8IXW5 612 aaPredicted RBP12.76□□□□□ -0.37
HERPUD1-216ENST00000568814 CCDC24Q8N4L8 307 aa12.76□□□□□ -0.37
HERPUD1-216ENST00000568814 ANKRD44Q8N8A2 993 aa12.76□□□□□ -0.37
HERPUD1-216ENST00000568814 TTLL11Q8NHH1 800 aa12.76□□□□□ -0.37
HERPUD1-216ENST00000568814 KAZALD1Q96I82 304 aa12.76□□□□□ -0.37
HERPUD1-216ENST00000568814 HMMRO75330 724 aa12.75□□□□□ -0.37
HERPUD1-216ENST00000568814 TGFB2P61812 414 aa12.75□□□□□ -0.37
HERPUD1-216ENST00000568814 EPHA10Q5JZY3 1008 aa12.75□□□□□ -0.37
HERPUD1-216ENST00000568814 RPGRQ92834 1020 aaKnown RBP12.75□□□□□ -0.37
HERPUD1-216ENST00000568814 H0YIN7 160 aa12.74□□□□□ -0.37
HERPUD1-216ENST00000568814 NPR1P16066 1061 aa12.74□□□□□ -0.37
HERPUD1-216ENST00000568814 IFIT5Q13325 482 aaKnown RBP12.74□□□□□ -0.37
HERPUD1-216ENST00000568814 CCDC57Q2TAC2 916 aa12.74□□□□□ -0.37
HERPUD1-216ENST00000568814 CEP85Q6P2H3 762 aa12.74□□□□□ -0.37
HERPUD1-216ENST00000568814 DDX46Q7L014 1031 aaKnown RBP12.74□□□□□ -0.37
HERPUD1-216ENST00000568814 RBM17Q96I25 401 aaKnown RBP12.74□□□□□ -0.37
HERPUD1-216ENST00000568814 CDC5LQ99459 802 aaKnown RBP12.74□□□□□ -0.37
HERPUD1-216ENST00000568814 C1orf115Q9H7X2 142 aa12.74□□□□□ -0.37
HERPUD1-216ENST00000568814 CHMP3Q9Y3E7 222 aa12.74□□□□□ -0.37
HERPUD1-216ENST00000568814 ANKRD18BA2A2Z9 1011 aa12.73□□□□□ -0.37
HERPUD1-216ENST00000568814 SRGAP3O43295 1099 aa12.73□□□□□ -0.37
HERPUD1-216ENST00000568814 SRGNP10124 158 aa12.73□□□□□ -0.37
HERPUD1-216ENST00000568814 HOXA10P31260 410 aaPredicted RBP12.73□□□□□ -0.37
HERPUD1-216ENST00000568814 ATP8B2P98198 1209 aa12.73□□□□□ -0.37
HERPUD1-216ENST00000568814 FAM161AQ3B820 660 aa12.73□□□□□ -0.37
HERPUD1-216ENST00000568814 STYK1Q6J9G0 422 aa12.73□□□□□ -0.37
HERPUD1-216ENST00000568814 C3orf67Q6ZVT6 689 aa12.73□□□□□ -0.37
HERPUD1-216ENST00000568814 C2CD5Q86YS7 1000 aa12.73□□□□□ -0.37
HERPUD1-216ENST00000568814 MASTLQ96GX5 879 aa12.73□□□□□ -0.37
HERPUD1-216ENST00000568814 CRAMP1Q96RY5 1269 aa12.73□□□□□ -0.37
HERPUD1-216ENST00000568814 GREM2Q9H772 168 aa12.73□□□□□ -0.37
HERPUD1-216ENST00000568814 DLEC1Q9Y238 1755 aa12.73□□□□□ -0.37
HERPUD1-216ENST00000568814 COL11A2P13942 1736 aaPredicted RBP12.73□□□□□ -0.37
HERPUD1-216ENST00000568814 ITGA6P23229 1130 aa12.72□□□□□ -0.37
HERPUD1-216ENST00000568814 ALDH1B1P30837 517 aa12.72□□□□□ -0.37
HERPUD1-216ENST00000568814 SSH3Q8TE77 659 aa12.72□□□□□ -0.37
HERPUD1-216ENST00000568814 KIAA1551Q9HCM1 1747 aa12.71□□□□□ -0.37
HERPUD1-216ENST00000568814 GRAPQ13588 217 aa12.71□□□□□ -0.37
HERPUD1-216ENST00000568814 POLA2Q14181 598 aa12.71□□□□□ -0.37
HERPUD1-216ENST00000568814 TAF7LQ5H9L4 462 aa12.71□□□□□ -0.37
HERPUD1-216ENST00000568814 TMC4Q7Z404 712 aa12.71□□□□□ -0.37
HERPUD1-216ENST00000568814 KLHL34Q8N239 644 aa12.71□□□□□ -0.37
HERPUD1-216ENST00000568814 GRAPLQ8TC17 118 aaPredicted RBP12.71□□□□□ -0.37
HERPUD1-216ENST00000568814 CNKSR1Q969H4 720 aa12.71□□□□□ -0.37
HERPUD1-216ENST00000568814 CCDC85AQ96PX6 553 aaPredicted RBP12.71□□□□□ -0.37
HERPUD1-216ENST00000568814 FBXO3Q9UK99 471 aa12.71□□□□□ -0.37
HERPUD1-216ENST00000568814 PNMA6EA0A0J9YXQ4 647 aa12.7□□□□□ -0.38
HERPUD1-216ENST00000568814 IGHMBP2P38935 993 aaKnown RBP12.7□□□□□ -0.38
HERPUD1-216ENST00000568814 ANKRD18AQ8IVF6 992 aa12.7□□□□□ -0.38
HERPUD1-216ENST00000568814 FHDC1Q9C0D6 1143 aaPredicted RBP12.7□□□□□ -0.38
HERPUD1-216ENST00000568814 PCDHB15Q9Y5E8 787 aa12.7□□□□□ -0.38
HERPUD1-216ENST00000568814 BBOX1O75936 387 aa12.69□□□□□ -0.38
HERPUD1-216ENST00000568814 DPEP1P16444 411 aa12.69□□□□□ -0.38
HERPUD1-216ENST00000568814 CHRNA5P30532 468 aa12.69□□□□□ -0.38
HERPUD1-216ENST00000568814 RFX5P48382 616 aaPredicted RBP12.69□□□□□ -0.38
HERPUD1-216ENST00000568814 RPS8P62241 208 aaKnown RBP12.69□□□□□ -0.38
HERPUD1-216ENST00000568814 HDAC1Q13547 482 aaPredicted RBP12.69□□□□□ -0.38
HERPUD1-216ENST00000568814 HSP90AB4PQ58FF6 505 aa12.69□□□□□ -0.38
HERPUD1-216ENST00000568814 ZNF622Q969S3 477 aaKnown RBP eCLIP12.69□□□□□ -0.382e-6■■□□□ 12
HERPUD1-216ENST00000568814 MPHOSPH8Q99549 860 aa12.69□□□□□ -0.38
HERPUD1-216ENST00000568814 RWDD1Q9H446 243 aaPredicted RBP12.69□□□□□ -0.38
HERPUD1-216ENST00000568814 COPRSQ9NQ92 184 aa12.69□□□□□ -0.38
HERPUD1-216ENST00000568814 SEC31BQ9NQW1 1179 aa12.69□□□□□ -0.38
HERPUD1-216ENST00000568814 CIAO1O76071 339 aa12.68□□□□□ -0.38
HERPUD1-216ENST00000568814 PTPN12Q05209 780 aaKnown RBP12.68□□□□□ -0.38
HERPUD1-216ENST00000568814 SIRT2Q8IXJ6 389 aa12.68□□□□□ -0.38
HERPUD1-216ENST00000568814 TTLL6Q8N841 843 aa12.68□□□□□ -0.38
HERPUD1-216ENST00000568814 SYT17Q9BSW7 474 aa12.68□□□□□ -0.38
HERPUD1-216ENST00000568814 BSDC1Q9NW68 430 aaPredicted RBP12.68□□□□□ -0.38
HERPUD1-216ENST00000568814 PIM2Q9P1W9 311 aa12.68□□□□□ -0.38
HERPUD1-216ENST00000568814 A0A0G2JLW4 131 aa12.67□□□□□ -0.38
HERPUD1-216ENST00000568814 PPEF1O14829 653 aaPredicted RBP12.67□□□□□ -0.38
HERPUD1-216ENST00000568814 PRPF40BQ6NWY9 871 aaKnown RBP12.67□□□□□ -0.38
HERPUD1-216ENST00000568814 LDHAL6AQ6ZMR3 332 aa12.67□□□□□ -0.38
HERPUD1-216ENST00000568814 CELF1Q92879 486 aaKnown RBP12.67□□□□□ -0.38
HERPUD1-216ENST00000568814 TMX4Q9H1E5 349 aaPredicted RBP12.67□□□□□ -0.38
HERPUD1-216ENST00000568814 NOP58Q9Y2X3 529 aaKnown RBP12.67□□□□□ -0.38
HERPUD1-216ENST00000568814 BRCA1P38398 1863 aaKnown RBP12.67□□□□□ -0.38
HERPUD1-216ENST00000568814 EYA2O00167 538 aa12.66□□□□□ -0.38
HERPUD1-216ENST00000568814 KCNA3P22001 575 aa12.66□□□□□ -0.38
HERPUD1-216ENST00000568814 IL15P40933 162 aaPredicted RBP12.66□□□□□ -0.38
HERPUD1-216ENST00000568814 G3BP1Q13283 466 aaKnown RBP eCLIP12.66□□□□□ -0.381e-10■■■□□ 15.3
HERPUD1-216ENST00000568814 CC2D2BQ6DHV5 1058 aa12.66□□□□□ -0.38
HERPUD1-216ENST00000568814 ERC1Q8IUD2 1116 aa12.66□□□□□ -0.38
HERPUD1-216ENST00000568814 CNNM1Q9NRU3 951 aa12.66□□□□□ -0.38
HERPUD1-216ENST00000568814 PPP4R2Q9NY27 417 aa12.66□□□□□ -0.38
HERPUD1-216ENST00000568814 SPEF2Q9C093 1822 aa12.66□□□□□ -0.38
HERPUD1-216ENST00000568814 LRRC37AA6NMS7 1700 aa12.65□□□□□ -0.38
HERPUD1-216ENST00000568814 MROH5Q6ZUA9 1318 aa12.65□□□□□ -0.38
HERPUD1-216ENST00000568814 SURF6O75683 361 aaKnown RBP12.65□□□□□ -0.38
HERPUD1-216ENST00000568814 OS9Q13438 667 aaPredicted RBP12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms